Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522627

Identifier: 42522627

GI number: 42522627

Start: 1017016

End: 1017399

Strand: Direct

Name: 42522627

Synonym: Bd1073

Alternate gene names: NA

Gene position: 1017016-1017399 (Clockwise)

Preceding gene: 42522626

Following gene: 42522628

Centisome position: 26.88

GC content: 45.31

Gene sequence:

>384_bases
ATGAACTTGTCAGCTGTTTTGTTTGTTCTTTTATCCGTCTCATTTTCTCAGGCCGCAGAGAAGACTTTTCAGTGCCGTGG
TGATTTTAAAAACTCGAATTTGATCTTCCGCTACTCTTTGATGGTGGATGGAAAGAACTCGCGCAGTCGTCTGATGTTTT
ACAAAGAAGATCGTATGACCAAAGATTTCGGCTGGAAGAAGTTTGCTTCGGCTTCAGGCAAGATTGTAGTCGATTCTCCG
TGGTTGCAGTATCGCGCCTATCTGGTGCCAGCGAGCACAGTGTATGAGCTGGTGCTGGCAGAGCCAGCGACAGATGTGCA
GATTGATGACCTGCCTTTCAGTCGTTTTTACTGTGTGAAATTTTTGCCTTATTTCCCTAAGTGA

Upstream 100 bases:

>100_bases
GGGTTGTGCTTTTTGCGTTTCAGGGGTTCGTGGAACGCTATCATTTTCTTTCACAGGCCTTTTGCTTGCGTGCTTTTGGC
TCTGACGCCCTAATAGTCCT

Downstream 100 bases:

>100_bases
AAACGCAATGAAAGGGAAATGATATTCGCTCGGATAATATCCTGAAAAATTTGACACTGAGTGGGGCCGTCCATTAGGAG
TGTTCAAACCTTTAAAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNLSAVLFVLLSVSFSQAAEKTFQCRGDFKNSNLIFRYSLMVDGKNSRSRLMFYKEDRMTKDFGWKKFASASGKIVVDSP
WLQYRAYLVPASTVYELVLAEPATDVQIDDLPFSRFYCVKFLPYFPK

Sequences:

>Translated_127_residues
MNLSAVLFVLLSVSFSQAAEKTFQCRGDFKNSNLIFRYSLMVDGKNSRSRLMFYKEDRMTKDFGWKKFASASGKIVVDSP
WLQYRAYLVPASTVYELVLAEPATDVQIDDLPFSRFYCVKFLPYFPK
>Mature_127_residues
MNLSAVLFVLLSVSFSQAAEKTFQCRGDFKNSNLIFRYSLMVDGKNSRSRLMFYKEDRMTKDFGWKKFASASGKIVVDSP
WLQYRAYLVPASTVYELVLAEPATDVQIDDLPFSRFYCVKFLPYFPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14699; Mature: 14699

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSAVLFVLLSVSFSQAAEKTFQCRGDFKNSNLIFRYSLMVDGKNSRSRLMFYKEDRMT
CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCC
KDFGWKKFASASGKIVVDSPWLQYRAYLVPASTVYELVLAEPATDVQIDDLPFSRFYCVK
CCCCCHHHCCCCCEEEECCCCHHEEEEECCHHHHHHHHCCCCCCCCEECCCCCHHEEEEE
FLPYFPK
ECCCCCC
>Mature Secondary Structure
MNLSAVLFVLLSVSFSQAAEKTFQCRGDFKNSNLIFRYSLMVDGKNSRSRLMFYKEDRMT
CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCC
KDFGWKKFASASGKIVVDSPWLQYRAYLVPASTVYELVLAEPATDVQIDDLPFSRFYCVK
CCCCCHHHCCCCCEEEECCCCHHEEEEECCHHHHHHHHCCCCCCCCEECCCCCHHEEEEE
FLPYFPK
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA