Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is gldF

Identifier: 42522583

GI number: 42522583

Start: 970984

End: 971757

Strand: Direct

Name: gldF

Synonym: Bd1024

Alternate gene names: NA

Gene position: 970984-971757 (Clockwise)

Preceding gene: 42522582

Following gene: 42522584

Centisome position: 25.67

GC content: 50.0

Gene sequence:

>774_bases
ATGAATCCAACAATGACAATCTTTAAAAAAGAGCTGAAGGGTTTTTACTTCAACTCAACATTCTGGGTGATCTGCTTCCT
GATGAGCCTGGTGTTCAGCTGGGTGTATCCGATTCAATTGAATCTGTTTTCGCAGCTTTTGATGAACTACGTGATGCAAC
AGGGGGTTCCTCAGAACCAGTTGAACATCCATTACGGGGTGTTCCTTCGCCAGCTGTCTTATCTGAACCTGCTTTTGATC
TTTGTGGTTCCCGCTTTGACGATGAAACTTTTTGCGGAAGAAAAGAAGCTTCGCACTTTTGATCTGCTTCTGACTTCACC
AGTGACATCCCTGCAGATCGTTCTGGGCAAGTACCTGGCCGCCTTGGGTGCTGTGGGTGGTCTGGTGATGCTGGCATTGT
TGTACCCGGTGGCGACGTCCACTTTGGCGACGGTGAACTGGGGGCCGCTGGTTGTGGCTTTCCTGGGAATCTTCCTGGTG
GGGGCTGTGTATGCGGCGATGGATCTGTTTGCGTCTTCTTTGACTGAAAACAGCATCGTGGCGTATGTGGCGTCGGTGAT
CTTCAACGTGTCCATCTGGTTTGTTGGCATTGGCACGGAAGTTATGGACAGCGAAGCGGCTCGCAAGATCTTTGAGCACG
TTTCCCTGAGCAGTCATCTTTCCAGTCTGGTGGAAGGCACGGTGCGCTCTAATGCGCTGGTGTTCTTCTTCAGTATTATT
GTCCTGTTCTGTTTCCTGGCAGAGCGTGTTGTTGAATCCTCACGTTGGAGATAA

Upstream 100 bases:

>100_bases
CCGGCGGTTACGGTTTGCTGGAACTGAGTCAGGCCAAACGGGATCTGGAAGATGTCTTCCTGAAACTTACATATGGTCAG
CAGGAACGTGGAGGTGAGGC

Downstream 100 bases:

>100_bases
GTCATGAGTAAATTGAGCAAAATTTCTTTCCTGTTCGCTGGGTTTTCTTTGGTCGCCATGTCCATCACTCGTTACCTATT
GGGTGACTGGGTCCCGTTCT

Product: ABC-type transport system permease protein

Products: NA

Alternate protein names: ABC Transporter Permease; ABC-2 Type Transport System Permease Protein; ABC-Type Transport System; ABC-2 Type Transporter Superfamily; Abc Transporter Permease Protein; ABC-2 Type Transporter Superfamily Protein; ABC Transporter Permease Protein; ABC-Type Transport System Membrane Protein; ABC-Type Transport System Permease Protein; Protein Involved In Gliding Motility Gldf; ABC Transporter Inner Membrane Protein; Multi-Copper Maturation ABC Transporter Permease

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNPTMTIFKKELKGFYFNSTFWVICFLMSLVFSWVYPIQLNLFSQLLMNYVMQQGVPQNQLNIHYGVFLRQLSYLNLLLI
FVVPALTMKLFAEEKKLRTFDLLLTSPVTSLQIVLGKYLAALGAVGGLVMLALLYPVATSTLATVNWGPLVVAFLGIFLV
GAVYAAMDLFASSLTENSIVAYVASVIFNVSIWFVGIGTEVMDSEAARKIFEHVSLSSHLSSLVEGTVRSNALVFFFSII
VLFCFLAERVVESSRWR

Sequences:

>Translated_257_residues
MNPTMTIFKKELKGFYFNSTFWVICFLMSLVFSWVYPIQLNLFSQLLMNYVMQQGVPQNQLNIHYGVFLRQLSYLNLLLI
FVVPALTMKLFAEEKKLRTFDLLLTSPVTSLQIVLGKYLAALGAVGGLVMLALLYPVATSTLATVNWGPLVVAFLGIFLV
GAVYAAMDLFASSLTENSIVAYVASVIFNVSIWFVGIGTEVMDSEAARKIFEHVSLSSHLSSLVEGTVRSNALVFFFSII
VLFCFLAERVVESSRWR
>Mature_257_residues
MNPTMTIFKKELKGFYFNSTFWVICFLMSLVFSWVYPIQLNLFSQLLMNYVMQQGVPQNQLNIHYGVFLRQLSYLNLLLI
FVVPALTMKLFAEEKKLRTFDLLLTSPVTSLQIVLGKYLAALGAVGGLVMLALLYPVATSTLATVNWGPLVVAFLGIFLV
GAVYAAMDLFASSLTENSIVAYVASVIFNVSIWFVGIGTEVMDSEAARKIFEHVSLSSHLSSLVEGTVRSNALVFFFSII
VLFCFLAERVVESSRWR

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28763; Mature: 28763

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTMTIFKKELKGFYFNSTFWVICFLMSLVFSWVYPIQLNLFSQLLMNYVMQQGVPQNQ
CCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LNIHYGVFLRQLSYLNLLLIFVVPALTMKLFAEEKKLRTFDLLLTSPVTSLQIVLGKYLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
ALGAVGGLVMLALLYPVATSTLATVNWGPLVVAFLGIFLVGAVYAAMDLFASSLTENSIV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AYVASVIFNVSIWFVGIGTEVMDSEAARKIFEHVSLSSHLSSLVEGTVRSNALVFFFSII
HHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLFCFLAERVVESSRWR
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA