Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522533

Identifier: 42522533

GI number: 42522533

Start: 915764

End: 917353

Strand: Direct

Name: 42522533

Synonym: Bd0969

Alternate gene names: NA

Gene position: 915764-917353 (Clockwise)

Preceding gene: 42522531

Following gene: 42522534

Centisome position: 24.21

GC content: 53.96

Gene sequence:

>1590_bases
ATGTCGTACGTTTTAGGTCTTCTGCTTTTGTGCGTTGTTGTGCAGGTCTCTGCAGCATCCGCCCCATCGTCTGGCTCTGT
CGAGCAATTGCGAATTTTTCTGAACCAGAACCCTTATGACAACAATGTCCGTCGCCACCTGATTGAAAAACATCTGGAGC
TTCATCAAAGCGCTGAAGCTCATGCGGAGTTTGCCTCTTACAAGAAGTTGGATCCCCATCTGAACGTCGATGGTGGAAAT
GCCCTGCAGATGCGGCTGGATATGCTTGATGGAAAGTTTGGTGCTGCCAAACACCTAGCCTTGAAACTATTGACTGTGCC
CCAGCTGGGGGCGGAAGACCGCTACCGAGCACATTTAACTTTGGGCGATCTGGCCTATGTTCACTTTACCTCGGGGGATG
CGGTTTCCCGCTATAAAAAAGCTCTTTCCGTCAAGCCGGTCCCGGAGGCGAAACATCGACTGGCGCGTGCTTACCTTCAG
AACAAAAAGTACGGCCGTGCTCAGGGTATACTGAGCGACCTGATCGGAGTGGGCTACGCCTCGGATCCGGTTCGTTACGA
TTATCTGCAAAGTTTGCTGGAGGCCGGACAGAACCAGGCCGCAGCCCTGCGTTTGAGTCAATGGTACAGCGAAGAACCGG
GCAATCCATGGATTGTGACAGCCCATGCGCGTTTTTTACTAAGTCTGGGACAGGACGAATCGGCGCGTATGATACTTCAG
CAGTATGCTGAGATCTATCAACCAACTACGGAAATCGATGAGCTGTTGCGAAGCACTCAGCCGCAGCGTACTCCAACGGC
GGAGACCGTCATGGTGCTTGGGCTGCGCCCGGAGATGCCGGTCAATGCAGGAGTGGTGCGGGGAGCTGCCTCTGCCGGAG
AGGCCGCGGGGAAGCAGGCAATGGAATCGTCTTTGAGCCCGCGACACTGGCAGATGCAGGCCGTGGCTGGATATCAGATG
ATTAATAACCGGGTGGAAGGGCAGGGATTTAATTCCCTGCTAAGTCCCGAGGCGGGTTACGTTGCAGGTGTTGCCGCCGA
AACTGACAATGAAGGTTCCGCCTATTCCTTTGTGGGCAGGGCCCGCACGTCTTGGCAAACCTATAAAATTCCTTCTGGGC
TTCAGCAGAATGGAGACCGGTCTCAGGCATTTGATATTGCCGGAGGACTGCAGACCCTGTTGGCAGCCGACTGGCAGTTG
CAAATGCAGCTTAACTATCGTTCACGCAGTGGCATTGAGTCGGCGACCAACACTTATGTGTCAGGTTATCAGATGCTGGG
TGTGCAGGCGGGAGTTTCTAAAACCTGGCAGCTTCGTTTTCCGTGGAGCTTTGAAGTCCACGCTGATCTGACTTTGCCCG
TGTACTTTACCGAGTCCACGGCCGAATCAGGTCAGTTGCGGTTTGGCTATTTTTCAAGCCTGCAGGCACTGGCGCAGTAT
CCGCTGCGTGAAGGACTGGCCTTTCGCGCAGGTTTGGGTCTTGTGCGCAACGAGATTCAGTTCAATGGCAATGGGTCCCG
CGGTGTGACCGATGCCACAGATTCCGAAGAAGGTTTGATGATTCCAGTCAGTCTTACGTGGGTTTATTAG

Upstream 100 bases:

>100_bases
ACAGAAGTTCGGTCCAGAAATGTATTAAGGGGTCCAGAGTGGATGACTTGTAATTGTTAAAAAAAATTGACGTACGACAC
ACTGAAACAGTGGAGGGTTT

Downstream 100 bases:

>100_bases
GGGGACGTTGTGTTGAAATATGTTTTGATGGCCTGTCTTTTTCTGAGTGCCTGCAATTTTTCTGAAGAGTCTAAAGTCAC
AGGAAACACTCCGCAAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MSYVLGLLLLCVVVQVSAASAPSSGSVEQLRIFLNQNPYDNNVRRHLIEKHLELHQSAEAHAEFASYKKLDPHLNVDGGN
ALQMRLDMLDGKFGAAKHLALKLLTVPQLGAEDRYRAHLTLGDLAYVHFTSGDAVSRYKKALSVKPVPEAKHRLARAYLQ
NKKYGRAQGILSDLIGVGYASDPVRYDYLQSLLEAGQNQAAALRLSQWYSEEPGNPWIVTAHARFLLSLGQDESARMILQ
QYAEIYQPTTEIDELLRSTQPQRTPTAETVMVLGLRPEMPVNAGVVRGAASAGEAAGKQAMESSLSPRHWQMQAVAGYQM
INNRVEGQGFNSLLSPEAGYVAGVAAETDNEGSAYSFVGRARTSWQTYKIPSGLQQNGDRSQAFDIAGGLQTLLAADWQL
QMQLNYRSRSGIESATNTYVSGYQMLGVQAGVSKTWQLRFPWSFEVHADLTLPVYFTESTAESGQLRFGYFSSLQALAQY
PLREGLAFRAGLGLVRNEIQFNGNGSRGVTDATDSEEGLMIPVSLTWVY

Sequences:

>Translated_529_residues
MSYVLGLLLLCVVVQVSAASAPSSGSVEQLRIFLNQNPYDNNVRRHLIEKHLELHQSAEAHAEFASYKKLDPHLNVDGGN
ALQMRLDMLDGKFGAAKHLALKLLTVPQLGAEDRYRAHLTLGDLAYVHFTSGDAVSRYKKALSVKPVPEAKHRLARAYLQ
NKKYGRAQGILSDLIGVGYASDPVRYDYLQSLLEAGQNQAAALRLSQWYSEEPGNPWIVTAHARFLLSLGQDESARMILQ
QYAEIYQPTTEIDELLRSTQPQRTPTAETVMVLGLRPEMPVNAGVVRGAASAGEAAGKQAMESSLSPRHWQMQAVAGYQM
INNRVEGQGFNSLLSPEAGYVAGVAAETDNEGSAYSFVGRARTSWQTYKIPSGLQQNGDRSQAFDIAGGLQTLLAADWQL
QMQLNYRSRSGIESATNTYVSGYQMLGVQAGVSKTWQLRFPWSFEVHADLTLPVYFTESTAESGQLRFGYFSSLQALAQY
PLREGLAFRAGLGLVRNEIQFNGNGSRGVTDATDSEEGLMIPVSLTWVY
>Mature_528_residues
SYVLGLLLLCVVVQVSAASAPSSGSVEQLRIFLNQNPYDNNVRRHLIEKHLELHQSAEAHAEFASYKKLDPHLNVDGGNA
LQMRLDMLDGKFGAAKHLALKLLTVPQLGAEDRYRAHLTLGDLAYVHFTSGDAVSRYKKALSVKPVPEAKHRLARAYLQN
KKYGRAQGILSDLIGVGYASDPVRYDYLQSLLEAGQNQAAALRLSQWYSEEPGNPWIVTAHARFLLSLGQDESARMILQQ
YAEIYQPTTEIDELLRSTQPQRTPTAETVMVLGLRPEMPVNAGVVRGAASAGEAAGKQAMESSLSPRHWQMQAVAGYQMI
NNRVEGQGFNSLLSPEAGYVAGVAAETDNEGSAYSFVGRARTSWQTYKIPSGLQQNGDRSQAFDIAGGLQTLLAADWQLQ
MQLNYRSRSGIESATNTYVSGYQMLGVQAGVSKTWQLRFPWSFEVHADLTLPVYFTESTAESGQLRFGYFSSLQALAQYP
LREGLAFRAGLGLVRNEIQFNGNGSRGVTDATDSEEGLMIPVSLTWVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58191; Mature: 58060

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVLGLLLLCVVVQVSAASAPSSGSVEQLRIFLNQNPYDNNVRRHLIEKHLELHQSAEA
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
HAEFASYKKLDPHLNVDGGNALQMRLDMLDGKFGAAKHLALKLLTVPQLGAEDRYRAHLT
HHHHHHHHCCCCCCCCCCCCEEEEEEEHHCCCCCHHHHHHEEEEECCCCCCCCCEEEEEE
LGDLAYVHFTSGDAVSRYKKALSVKPVPEAKHRLARAYLQNKKYGRAQGILSDLIGVGYA
ECCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
SDPVRYDYLQSLLEAGQNQAAALRLSQWYSEEPGNPWIVTAHARFLLSLGQDESARMILQ
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHH
QYAEIYQPTTEIDELLRSTQPQRTPTAETVMVLGLRPEMPVNAGVVRGAASAGEAAGKQA
HHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHH
MESSLSPRHWQMQAVAGYQMINNRVEGQGFNSLLSPEAGYVAGVAAETDNEGSAYSFVGR
HHHCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCEEEEHHC
ARTSWQTYKIPSGLQQNGDRSQAFDIAGGLQTLLAADWQLQMQLNYRSRSGIESATNTYV
CCCCCEEEECCCCHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHH
SGYQMLGVQAGVSKTWQLRFPWSFEVHADLTLPVYFTESTAESGQLRFGYFSSLQALAQY
CCHHEEEEECCCCCEEEEECCEEEEEEECEEEEEEEECCCCCCCCEEEHHHHHHHHHHHC
PLREGLAFRAGLGLVRNEIQFNGNGSRGVTDATDSEEGLMIPVSLTWVY
HHHHCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
SYVLGLLLLCVVVQVSAASAPSSGSVEQLRIFLNQNPYDNNVRRHLIEKHLELHQSAEA
HHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
HAEFASYKKLDPHLNVDGGNALQMRLDMLDGKFGAAKHLALKLLTVPQLGAEDRYRAHLT
HHHHHHHHCCCCCCCCCCCCEEEEEEEHHCCCCCHHHHHHEEEEECCCCCCCCCEEEEEE
LGDLAYVHFTSGDAVSRYKKALSVKPVPEAKHRLARAYLQNKKYGRAQGILSDLIGVGYA
ECCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
SDPVRYDYLQSLLEAGQNQAAALRLSQWYSEEPGNPWIVTAHARFLLSLGQDESARMILQ
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHH
QYAEIYQPTTEIDELLRSTQPQRTPTAETVMVLGLRPEMPVNAGVVRGAASAGEAAGKQA
HHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCHHHHHHH
MESSLSPRHWQMQAVAGYQMINNRVEGQGFNSLLSPEAGYVAGVAAETDNEGSAYSFVGR
HHHCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEEECCCCCCCEEEEHHC
ARTSWQTYKIPSGLQQNGDRSQAFDIAGGLQTLLAADWQLQMQLNYRSRSGIESATNTYV
CCCCCEEEECCCCHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHH
SGYQMLGVQAGVSKTWQLRFPWSFEVHADLTLPVYFTESTAESGQLRFGYFSSLQALAQY
CCHHEEEEECCCCCEEEEECCEEEEEEECEEEEEEEECCCCCCCCEEEHHHHHHHHHHHC
PLREGLAFRAGLGLVRNEIQFNGNGSRGVTDATDSEEGLMIPVSLTWVY
HHHHCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA