| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is pilI
Identifier: 42522433
GI number: 42522433
Start: 808743
End: 809501
Strand: Direct
Name: pilI
Synonym: Bd0861
Alternate gene names: NA
Gene position: 808743-809501 (Clockwise)
Preceding gene: 42522432
Following gene: 42522434
Centisome position: 21.38
GC content: 50.59
Gene sequence:
>759_bases TTGACTTTGGCACGCACCACTTTGCGCGAAATGTTGCGTGAACGTGTTTTTATGGTGGCCGTGTTGATTGCCATCGCTTT GTTGGGTCTGAGCTTCTTGTTGGGGGCATTGTCCTTTGCTGAGCAACGCAAAATTCTGACGGACTTCGGTTTCCTGGCGA TTCAGATTTCGGGTTTGGGAATTTCTCTGTTTTCCGGGGCGTACCTGTTGGCCAAGGAAATTGAAAAACAAACCTGTTTG TTGATTCTGTCCCGTCCGGTGTCCCGTGCTCAGTTTATCGTCGGAAAACTTTTGGGGGTTCTGGCGTTGAACAGTCTTTT GATGGGATCTTTGACCATTTTGCTGTGGATTCTGCTGGGTCTGTGGAAAGAACCTCAATTCCTGCTGTCGTTCCTGGAGA TCGCTCTCAGTCTGTGGTGTGAAAGCGCCGTGATTCTGTGTCTGGTGATTTTCTTCAGTCTGGTGGTGCGCCCGGTGCTG GCTTTGGGCGCGGGCTTTATGGTGTTCCTGCTGGGGCATTGGTTGGGGGATCTGGCTTTCTTCGCGGAAAAAAGTCGGGA AGACCTGTTTGTGCAGGCAGTGAAAGTGCTGCACTGGTTGACCCCGAATTTCTATCGTATGAACTGGAAATCAGCGTACT TCCTTGAAAAGGGGATTCCGGCTGAAAATATTCTGTGGATGCTGGCGCACATGACGGGCTGGGCTTTGTTGGCGGTGCTG GCGACGAACTTCTTCTTCAGGAGAAAAGACATTGTTTGA
Upstream 100 bases:
>100_bases CTGTACGACGGGGTATTAAGCTCCTTCATGGCTGAATTCCAAAGCCTGGAAAAAGCCTTCTCTGTTCTGAAAGGAAAGGA GGAGGGCCGTGTATAAGGTT
Downstream 100 bases:
>100_bases TCTGGATACGGGCTTTTACGTCCTTTTCTTTGTTTTGGGTGCGATTTTTGGAAGTTTCGGCAATGTCGTGATCTATCGCC TGCCGCGCGAGGAAAGTGTC
Product: pilus biogenesis protein and ABC-type transporter
Products: NA
Alternate protein names: ABC-2 Type Transporter; Type IV Pilin Protein; ABC Transporter Permease; ABC-Type Transport System ATPase Subunit; Pilus Biogenesis Protein And ABC-Type Transporter
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTLARTTLREMLRERVFMVAVLIAIALLGLSFLLGALSFAEQRKILTDFGFLAIQISGLGISLFSGAYLLAKEIEKQTCL LILSRPVSRAQFIVGKLLGVLALNSLLMGSLTILLWILLGLWKEPQFLLSFLEIALSLWCESAVILCLVIFFSLVVRPVL ALGAGFMVFLLGHWLGDLAFFAEKSREDLFVQAVKVLHWLTPNFYRMNWKSAYFLEKGIPAENILWMLAHMTGWALLAVL ATNFFFRRKDIV
Sequences:
>Translated_252_residues MTLARTTLREMLRERVFMVAVLIAIALLGLSFLLGALSFAEQRKILTDFGFLAIQISGLGISLFSGAYLLAKEIEKQTCL LILSRPVSRAQFIVGKLLGVLALNSLLMGSLTILLWILLGLWKEPQFLLSFLEIALSLWCESAVILCLVIFFSLVVRPVL ALGAGFMVFLLGHWLGDLAFFAEKSREDLFVQAVKVLHWLTPNFYRMNWKSAYFLEKGIPAENILWMLAHMTGWALLAVL ATNFFFRRKDIV >Mature_251_residues TLARTTLREMLRERVFMVAVLIAIALLGLSFLLGALSFAEQRKILTDFGFLAIQISGLGISLFSGAYLLAKEIEKQTCLL ILSRPVSRAQFIVGKLLGVLALNSLLMGSLTILLWILLGLWKEPQFLLSFLEIALSLWCESAVILCLVIFFSLVVRPVLA LGAGFMVFLLGHWLGDLAFFAEKSREDLFVQAVKVLHWLTPNFYRMNWKSAYFLEKGIPAENILWMLAHMTGWALLAVLA TNFFFRRKDIV
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28404; Mature: 28273
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLARTTLREMLRERVFMVAVLIAIALLGLSFLLGALSFAEQRKILTDFGFLAIQISGLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCH ISLFSGAYLLAKEIEKQTCLLILSRPVSRAQFIVGKLLGVLALNSLLMGSLTILLWILLG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWKEPQFLLSFLEIALSLWCESAVILCLVIFFSLVVRPVLALGAGFMVFLLGHWLGDLAF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAEKSREDLFVQAVKVLHWLTPNFYRMNWKSAYFLEKGIPAENILWMLAHMTGWALLAVL HHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ATNFFFRRKDIV HHHHHHHHHCCC >Mature Secondary Structure TLARTTLREMLRERVFMVAVLIAIALLGLSFLLGALSFAEQRKILTDFGFLAIQISGLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCH ISLFSGAYLLAKEIEKQTCLLILSRPVSRAQFIVGKLLGVLALNSLLMGSLTILLWILLG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWKEPQFLLSFLEIALSLWCESAVILCLVIFFSLVVRPVLALGAGFMVFLLGHWLGDLAF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAEKSREDLFVQAVKVLHWLTPNFYRMNWKSAYFLEKGIPAENILWMLAHMTGWALLAVL HHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ATNFFFRRKDIV HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA