| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
Click here to switch to the map view.
The map label for this gene is metK
Identifier: 42522422
GI number: 42522422
Start: 795930
End: 797093
Strand: Direct
Name: metK
Synonym: Bd0850
Alternate gene names: 42522422
Gene position: 795930-797093 (Clockwise)
Preceding gene: 42522421
Following gene: 42522423
Centisome position: 21.04
GC content: 52.23
Gene sequence:
>1164_bases GTGAAAAACTATCTCTTTACGAGTGAATCTGTATCCGAAGGTCACCCCGACAAAATGGCCGATCAAATCTCTGACGGTAT TCTGGATGCCATCCTGGCTCAGGATCCGAAGGGCCGTGTTGCCTGTGAAACCCTGCTGACAACCGGTTTGGTGGTTGTTG CCGGTGAGATCACAACTTCGGCAAAAGTGAACTTCTCTGAAGTGGCTCGTGATGTTGTAAAACGCATTGGCTACGACCAC TCTGACAAGGGCTTTGACTACAAAACATGCGGCGTGATGATTGCCGTGGGTCAGCAGTCCCCGGATATCGCGGTGGGCGT TAAAGAAACTCTTTCTGACAATCAAGGCGCTGGTGATCAGGGTCTGATGTTCGGTTACGCTGTGAACGAAACTCCAGAGC TGATGCCTTTGAGCATCGCGATGTCTCACAAACTGGTGAAAGACCTGGCGGCTCTTCGCAAAGCCAACAAAGTGGACTGG TTGCGCCCGGATGCAAAATCCCAAGTGACTGTTCAGTACGAAAACGGCATTGCAAAACGCATCGATGCAGTGGTTATCTC CACTCAGCACGCCGACAGTGTTTCCAACTCCACAATCCAGGAGTTCATCACTGAAGAGCTGATCAAAAAATCCATCCCAG GCAACTGGATCGACTCCAAAACCAAATTCTTCATCAACCCAACAGGCCGTTTCGTAACGGGTGGTCCAATGGGTGATGCG GGTTTGACCGGTCGTAAAATCATCGTGGACACTTATGGTGGTCACGGTGCTCACGGTGGTGGCGCGTTCTCTGGTAAAGA TCCTTCCAAAGTGGACCGCTCTGCCGCTTACGCATCACGTCATATCGCGAAGAACATCGTGGGAGCGGGTCTTGCGGAAC GCTGCCTGGTTCAGGTGGCTTACGCGATCGGTGTGGCTGAGCCTGTCAGCATCACTGTGAATGACTACGGAACAAGCAAA GTTGGCCCGGAAGTGCTTGAAAAAGCGGTCCGCCAGGTCTTCGATTTGCGCCCAGCTCGCATTACAAAGGATCTGGACCT GCTAAGACCGATTTACAGCCCGACAGCGGCTTACGGCCACTTTGGTCGTAACGAAGAGTCCTTCACTTGGGAGCGCCTGA ACAAGGTCGACCAGCTGAAAGACGCTGTAAAGACTTTGGCTTAA
Upstream 100 bases:
>100_bases TGGCCGCTCGCTAAATTCCAGCTCAATTTGACTGTATTTTAGGATGGTCCCAGAGGGGGCCGAGCTCATTAACACCATTC CCTAATGAGGAACGAACGCA
Downstream 100 bases:
>100_bases ATTTTTATAAAACCTTAATCATTGCGCCGAGTTGTCACTAGCAACTCGGCGCTTCTTATTTATACTACCGCCCATGGATC CTAAATACATACGCAATTTC
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKNYLFTSESVSEGHPDKMADQISDGILDAILAQDPKGRVACETLLTTGLVVVAGEITTSAKVNFSEVARDVVKRIGYDH SDKGFDYKTCGVMIAVGQQSPDIAVGVKETLSDNQGAGDQGLMFGYAVNETPELMPLSIAMSHKLVKDLAALRKANKVDW LRPDAKSQVTVQYENGIAKRIDAVVISTQHADSVSNSTIQEFITEELIKKSIPGNWIDSKTKFFINPTGRFVTGGPMGDA GLTGRKIIVDTYGGHGAHGGGAFSGKDPSKVDRSAAYASRHIAKNIVGAGLAERCLVQVAYAIGVAEPVSITVNDYGTSK VGPEVLEKAVRQVFDLRPARITKDLDLLRPIYSPTAAYGHFGRNEESFTWERLNKVDQLKDAVKTLA
Sequences:
>Translated_387_residues MKNYLFTSESVSEGHPDKMADQISDGILDAILAQDPKGRVACETLLTTGLVVVAGEITTSAKVNFSEVARDVVKRIGYDH SDKGFDYKTCGVMIAVGQQSPDIAVGVKETLSDNQGAGDQGLMFGYAVNETPELMPLSIAMSHKLVKDLAALRKANKVDW LRPDAKSQVTVQYENGIAKRIDAVVISTQHADSVSNSTIQEFITEELIKKSIPGNWIDSKTKFFINPTGRFVTGGPMGDA GLTGRKIIVDTYGGHGAHGGGAFSGKDPSKVDRSAAYASRHIAKNIVGAGLAERCLVQVAYAIGVAEPVSITVNDYGTSK VGPEVLEKAVRQVFDLRPARITKDLDLLRPIYSPTAAYGHFGRNEESFTWERLNKVDQLKDAVKTLA >Mature_387_residues MKNYLFTSESVSEGHPDKMADQISDGILDAILAQDPKGRVACETLLTTGLVVVAGEITTSAKVNFSEVARDVVKRIGYDH SDKGFDYKTCGVMIAVGQQSPDIAVGVKETLSDNQGAGDQGLMFGYAVNETPELMPLSIAMSHKLVKDLAALRKANKVDW LRPDAKSQVTVQYENGIAKRIDAVVISTQHADSVSNSTIQEFITEELIKKSIPGNWIDSKTKFFINPTGRFVTGGPMGDA GLTGRKIIVDTYGGHGAHGGGAFSGKDPSKVDRSAAYASRHIAKNIVGAGLAERCLVQVAYAIGVAEPVSITVNDYGTSK VGPEVLEKAVRQVFDLRPARITKDLDLLRPIYSPTAAYGHFGRNEESFTWERLNKVDQLKDAVKTLA
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family
Homologues:
Organism=Homo sapiens, GI5174529, Length=374, Percent_Identity=57.4866310160428, Blast_Score=418, Evalue=1e-117, Organism=Homo sapiens, GI4557737, Length=373, Percent_Identity=57.372654155496, Blast_Score=416, Evalue=1e-116, Organism=Escherichia coli, GI1789311, Length=382, Percent_Identity=63.8743455497382, Blast_Score=503, Evalue=1e-143, Organism=Caenorhabditis elegans, GI17538498, Length=374, Percent_Identity=59.6256684491979, Blast_Score=439, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17538494, Length=374, Percent_Identity=59.6256684491979, Blast_Score=439, Evalue=1e-123, Organism=Caenorhabditis elegans, GI25145633, Length=384, Percent_Identity=58.59375, Blast_Score=432, Evalue=1e-121, Organism=Caenorhabditis elegans, GI17551082, Length=375, Percent_Identity=56, Blast_Score=411, Evalue=1e-115, Organism=Caenorhabditis elegans, GI32565905, Length=374, Percent_Identity=54.5454545454545, Blast_Score=374, Evalue=1e-104, Organism=Caenorhabditis elegans, GI32565911, Length=328, Percent_Identity=57.3170731707317, Blast_Score=365, Evalue=1e-101, Organism=Caenorhabditis elegans, GI25145635, Length=338, Percent_Identity=56.2130177514793, Blast_Score=357, Evalue=5e-99, Organism=Caenorhabditis elegans, GI32565903, Length=301, Percent_Identity=58.1395348837209, Blast_Score=328, Evalue=3e-90, Organism=Caenorhabditis elegans, GI32565909, Length=82, Percent_Identity=62.1951219512195, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI32565907, Length=39, Percent_Identity=79.4871794871795, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320710, Length=381, Percent_Identity=56.1679790026247, Blast_Score=432, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6323209, Length=375, Percent_Identity=56, Blast_Score=424, Evalue=1e-119, Organism=Drosophila melanogaster, GI45552159, Length=373, Percent_Identity=57.372654155496, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580529, Length=373, Percent_Identity=57.372654155496, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580537, Length=373, Percent_Identity=57.372654155496, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580533, Length=373, Percent_Identity=57.372654155496, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580535, Length=373, Percent_Identity=57.372654155496, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580531, Length=373, Percent_Identity=57.372654155496, Blast_Score=419, Evalue=1e-117, Organism=Drosophila melanogaster, GI24580527, Length=373, Percent_Identity=56.8364611260054, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580525, Length=373, Percent_Identity=56.8364611260054, Blast_Score=411, Evalue=1e-115, Organism=Drosophila melanogaster, GI24580541, Length=374, Percent_Identity=54.5454545454545, Blast_Score=389, Evalue=1e-108, Organism=Drosophila melanogaster, GI24580539, Length=118, Percent_Identity=57.6271186440678, Blast_Score=143, Evalue=2e-34,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METK_BDEBA (Q6MPK2)
Other databases:
- EMBL: BX842648 - RefSeq: NP_967802.1 - ProteinModelPortal: Q6MPK2 - SMR: Q6MPK2 - GeneID: 2733921 - GenomeReviews: BX842601_GR - KEGG: bba:Bd0850 - NMPDR: fig|264462.1.peg.772 - HOGENOM: HBG443662 - OMA: IYYAHRL - PhylomeDB: Q6MPK2 - ProtClustDB: PRK05250 - BioCyc: BBAC264462:BD0850-MONOMER - BRENDA: 2.5.1.6 - GO: GO:0005737 - HAMAP: MF_00086 - InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 - PANTHER: PTHR11964 - PIRSF: PIRSF000497 - TIGRFAMs: TIGR01034
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N; SSF55973 S-AdoMet_synt
EC number: =2.5.1.6
Molecular weight: Translated: 41703; Mature: 41703
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00376 ADOMET_SYNTHASE_1; PS00377 ADOMET_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYLFTSESVSEGHPDKMADQISDGILDAILAQDPKGRVACETLLTTGLVVVAGEITTS CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEEEECCCCC AKVNFSEVARDVVKRIGYDHSDKGFDYKTCGVMIAVGQQSPDIAVGVKETLSDNQGAGDQ CCCCHHHHHHHHHHHCCCCCCCCCCCEEECEEEEEECCCCCCEEECHHHHHCCCCCCCCC GLMFGYAVNETPELMPLSIAMSHKLVKDLAALRKANKVDWLRPDAKSQVTVQYENGIAKR CEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHH IDAVVISTQHADSVSNSTIQEFITEELIKKSIPGNWIDSKTKFFINPTGRFVTGGPMGDA HHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCC GLTGRKIIVDTYGGHGAHGGGAFSGKDPSKVDRSAAYASRHIAKNIVGAGLAERCLVQVA CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YAIGVAEPVSITVNDYGTSKVGPEVLEKAVRQVFDLRPARITKDLDLLRPIYSPTAAYGH HHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHC FGRNEESFTWERLNKVDQLKDAVKTLA CCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNYLFTSESVSEGHPDKMADQISDGILDAILAQDPKGRVACETLLTTGLVVVAGEITTS CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEEEECCCCC AKVNFSEVARDVVKRIGYDHSDKGFDYKTCGVMIAVGQQSPDIAVGVKETLSDNQGAGDQ CCCCHHHHHHHHHHHCCCCCCCCCCCEEECEEEEEECCCCCCEEECHHHHHCCCCCCCCC GLMFGYAVNETPELMPLSIAMSHKLVKDLAALRKANKVDWLRPDAKSQVTVQYENGIAKR CEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHH IDAVVISTQHADSVSNSTIQEFITEELIKKSIPGNWIDSKTKFFINPTGRFVTGGPMGDA HHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCC GLTGRKIIVDTYGGHGAHGGGAFSGKDPSKVDRSAAYASRHIAKNIVGAGLAERCLVQVA CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YAIGVAEPVSITVNDYGTSKVGPEVLEKAVRQVFDLRPARITKDLDLLRPIYSPTAAYGH HHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHC FGRNEESFTWERLNKVDQLKDAVKTLA CCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA