| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522323
Identifier: 42522323
GI number: 42522323
Start: 701124
End: 702470
Strand: Direct
Name: 42522323
Synonym: Bd0739
Alternate gene names: NA
Gene position: 701124-702470 (Clockwise)
Preceding gene: 42522322
Following gene: 42522324
Centisome position: 18.53
GC content: 51.74
Gene sequence:
>1347_bases ATGAGCAAAAAGAAAAAGAAATCTTCAGCCGCAGAGAATCTGATTGAGTCATTGATGGATGATCTCAAGGAGATTCAATC CGAGTCCTCGTATCGTGCGAACGATACGGGCGAGGAATATAATGGGCTGCCTGCTCTTGCCACAGACGAAAATCGCCTGG ATGCGACGGCCGTGGGCGGGAACATCTGGGACAGTCTGGAACAGGGACTTGGGAAAGATGCTGCCAAAGACATCGACTCT TCAGAGTTTGTCGGTGGTGCTGACTATTCCGCCGAGTCCAATGAAAGCTCTTACGACGGTTCTTACAACACACCGGAGAT TCCTGAAGTGGAGTCATCCGATTCCGACGATTTTGAAATGCCCGAGGGCTTCGGCGACCTGCCACCTTCCGAGCGTTTCA TGATGGGCCCTTCCGTGGGTGAAGAGCAGCGTTACGACGGTCCTTCCGCGGATGCTGGCTATCAATCAGCGGATGACCTG GATGCGATGCCAGTGTCGGCGATGGATGATGATTCCACTCGTCCGGTGTTCAGCTCGCAACCTGCCGGTGAAGACAAAAC TGTTTCCATTCAACAGGACTTCAACGCCACCAGCTCTGCTGTGGGTGGCACTGATGCGGATAAAACCGTTGCAGTCGAAG GTTTTGCCAATGCCCGTGTGGGTTCGCGCAAAGCCCAGCCCGAAGTGGATGTTAAAGTCAGTGTCGGAAACTTCCGTGGC AGCCGTGGGGCCGCCAATGTGATGACGTCCGTGGATGCCAGCCTGGCTCAGGCCGAAAACCTGAAGCTGGCGCAACAGCG CATCCTGGAACTTGAGCGCGAAGTGGAACATCTGCGTGGTGAAAATGAAGAGCTGGCTTCTGCCGGTGAAATCATCCGTT CCCGCACTGATGACCTGACCGTCCGTATTTCTGAAATTGAAAAAGAGAAAACCGAAATGCAGGAATCCGCGCAAAGCGAG ATCCTGATCCTGAAAGGGAACCTTCAGTACAAAGAGAACGAGGTTGCCAAGGCGCGCATCAAGGTTGAAGAACTTGAAAC TAGACTTAAATCGGACTTCAAAAAGATTCGCGTCCGCGAACGGGAATTGGAAAACCGCCTGGAATTGCTCCGTGCGGAAA AGTCCGCCCTTGTTCGGTCCAAAGATGAGTATATTTTAGAACAAAAAAGAAAGATTGATCAGCTCTCTCAGGAACTCGAT AATTACCGTAAGAAATGTCTTGAGCTTAACAAGACGATCGAGGCCAATCAGGATCAAGTCAAACGAACCGAGCGCGCACT GCGTTTGGCTTTGACGAACCTGGAGGCGAAAGAAGAGAATCTCGTTCCGTTGAAGAAAGCTGAGTAG
Upstream 100 bases:
>100_bases GATCTCAAAATGAAACACCCCGGACCTAGATCCTGATATTGATCCGGCTTTGTTTTATATTTAAAGGGAAGTCCGGAAAA TTCCGATATTTCCCTTAGAC
Downstream 100 bases:
>100_bases TATGGAGTCCGCTTCCCAGGTAGAAAGTAGCGAGGGCACCGCCGTCGCGAAACCTGCTCCCGTAAAAAAGATCAAGATCA TCGTCAGTGATCTCCATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSKKKKKSSAAENLIESLMDDLKEIQSESSYRANDTGEEYNGLPALATDENRLDATAVGGNIWDSLEQGLGKDAAKDIDS SEFVGGADYSAESNESSYDGSYNTPEIPEVESSDSDDFEMPEGFGDLPPSERFMMGPSVGEEQRYDGPSADAGYQSADDL DAMPVSAMDDDSTRPVFSSQPAGEDKTVSIQQDFNATSSAVGGTDADKTVAVEGFANARVGSRKAQPEVDVKVSVGNFRG SRGAANVMTSVDASLAQAENLKLAQQRILELEREVEHLRGENEELASAGEIIRSRTDDLTVRISEIEKEKTEMQESAQSE ILILKGNLQYKENEVAKARIKVEELETRLKSDFKKIRVRERELENRLELLRAEKSALVRSKDEYILEQKRKIDQLSQELD NYRKKCLELNKTIEANQDQVKRTERALRLALTNLEAKEENLVPLKKAE
Sequences:
>Translated_448_residues MSKKKKKSSAAENLIESLMDDLKEIQSESSYRANDTGEEYNGLPALATDENRLDATAVGGNIWDSLEQGLGKDAAKDIDS SEFVGGADYSAESNESSYDGSYNTPEIPEVESSDSDDFEMPEGFGDLPPSERFMMGPSVGEEQRYDGPSADAGYQSADDL DAMPVSAMDDDSTRPVFSSQPAGEDKTVSIQQDFNATSSAVGGTDADKTVAVEGFANARVGSRKAQPEVDVKVSVGNFRG SRGAANVMTSVDASLAQAENLKLAQQRILELEREVEHLRGENEELASAGEIIRSRTDDLTVRISEIEKEKTEMQESAQSE ILILKGNLQYKENEVAKARIKVEELETRLKSDFKKIRVRERELENRLELLRAEKSALVRSKDEYILEQKRKIDQLSQELD NYRKKCLELNKTIEANQDQVKRTERALRLALTNLEAKEENLVPLKKAE >Mature_447_residues SKKKKKSSAAENLIESLMDDLKEIQSESSYRANDTGEEYNGLPALATDENRLDATAVGGNIWDSLEQGLGKDAAKDIDSS EFVGGADYSAESNESSYDGSYNTPEIPEVESSDSDDFEMPEGFGDLPPSERFMMGPSVGEEQRYDGPSADAGYQSADDLD AMPVSAMDDDSTRPVFSSQPAGEDKTVSIQQDFNATSSAVGGTDADKTVAVEGFANARVGSRKAQPEVDVKVSVGNFRGS RGAANVMTSVDASLAQAENLKLAQQRILELEREVEHLRGENEELASAGEIIRSRTDDLTVRISEIEKEKTEMQESAQSEI LILKGNLQYKENEVAKARIKVEELETRLKSDFKKIRVRERELENRLELLRAEKSALVRSKDEYILEQKRKIDQLSQELDN YRKKCLELNKTIEANQDQVKRTERALRLALTNLEAKEENLVPLKKAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49641; Mature: 49510
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKKKKSSAAENLIESLMDDLKEIQSESSYRANDTGEEYNGLPALATDENRLDATAVGG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCC NIWDSLEQGLGKDAAKDIDSSEFVGGADYSAESNESSYDGSYNTPEIPEVESSDSDDFEM HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEGFGDLPPSERFMMGPSVGEEQRYDGPSADAGYQSADDLDAMPVSAMDDDSTRPVFSSQ CCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAGEDKTVSIQQDFNATSSAVGGTDADKTVAVEGFANARVGSRKAQPEVDVKVSVGNFRG CCCCCCEEEECCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC SRGAANVMTSVDASLAQAENLKLAQQRILELEREVEHLRGENEELASAGEIIRSRTDDLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCE VRISEIEKEKTEMQESAQSEILILKGNLQYKENEVAKARIKVEELETRLKSDFKKIRVRE EEHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RELENRLELLRAEKSALVRSKDEYILEQKRKIDQLSQELDNYRKKCLELNKTIEANQDQV HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KRTERALRLALTNLEAKEENLVPLKKAE HHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SKKKKKSSAAENLIESLMDDLKEIQSESSYRANDTGEEYNGLPALATDENRLDATAVGG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCC NIWDSLEQGLGKDAAKDIDSSEFVGGADYSAESNESSYDGSYNTPEIPEVESSDSDDFEM HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEGFGDLPPSERFMMGPSVGEEQRYDGPSADAGYQSADDLDAMPVSAMDDDSTRPVFSSQ CCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAGEDKTVSIQQDFNATSSAVGGTDADKTVAVEGFANARVGSRKAQPEVDVKVSVGNFRG CCCCCCEEEECCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC SRGAANVMTSVDASLAQAENLKLAQQRILELEREVEHLRGENEELASAGEIIRSRTDDLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCE VRISEIEKEKTEMQESAQSEILILKGNLQYKENEVAKARIKVEELETRLKSDFKKIRVRE EEHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RELENRLELLRAEKSALVRSKDEYILEQKRKIDQLSQELDNYRKKCLELNKTIEANQDQV HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KRTERALRLALTNLEAKEENLVPLKKAE HHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA