Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522272

Identifier: 42522272

GI number: 42522272

Start: 634244

End: 634774

Strand: Direct

Name: 42522272

Synonym: Bd0685

Alternate gene names: NA

Gene position: 634244-634774 (Clockwise)

Preceding gene: 42522269

Following gene: 42522273

Centisome position: 16.77

GC content: 50.09

Gene sequence:

>531_bases
ATGAGGATTCTATCTTGCGGCTCCATGTTCAAACTCTCGCGCCGCATGCAGCTTATTTACGATCATCTTCTGCCCGGAAA
GCCCGTCTGGGACTTCTGTTGCGACCACGGCTATATGGGTTTAAACGCCTATGAAAGCGGTTTGTTCACCGAGGTTCACT
TTGTCGACCAGGTCCCGCACATCATCGAGCGCCTGGAGCAGCGCTTTCAGAATGAGTACTTCCGCGAAGATTCAGCCTGT
CAGGCGTTTTTCCACCCGCAGCCGGGAGGAGCTCTTGAGCTGTCCATCCAAGGCAGCGTGGTGATCGCCGGAGTGGGGGC
TCACTCTATTCTGGAAATTATCAGATCTTTGACGGAAAAAGGTGTTCTGAGTGCGGACCGATTGATATTGGGTCCACAGC
GTGACGAAGAAAAACTGTTTGTGTGGCTGCAAAATCTGCCGCATTTTTCGTACAAAAGTGATTCCGAAATCCTTGCGATC
GACGAAAGAGGTCGAAACCGTAAGTTGTTGATATTCGATAAAATTCTGTAA

Upstream 100 bases:

>100_bases
CGGCAAAGTCGACCATGCGGGCGCCCAGCTTTTCATGTGTGTCTGCTAAAGGTGTCTTTTTCATGCGGTTGCATAATCCT
TTCCCCGTGACATTCAGTCA

Downstream 100 bases:

>100_bases
TGTTCGGCGAGTTTTTGACGCGCTCCGAATAGCTATATTAAATGTCTGTAAGACTGTGAACAAAATATTGATTATCAGAG
GACCTGCACATAATTGTGTC

Product: putative SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRILSCGSMFKLSRRMQLIYDHLLPGKPVWDFCCDHGYMGLNAYESGLFTEVHFVDQVPHIIERLEQRFQNEYFREDSAC
QAFFHPQPGGALELSIQGSVVIAGVGAHSILEIIRSLTEKGVLSADRLILGPQRDEEKLFVWLQNLPHFSYKSDSEILAI
DERGRNRKLLIFDKIL

Sequences:

>Translated_176_residues
MRILSCGSMFKLSRRMQLIYDHLLPGKPVWDFCCDHGYMGLNAYESGLFTEVHFVDQVPHIIERLEQRFQNEYFREDSAC
QAFFHPQPGGALELSIQGSVVIAGVGAHSILEIIRSLTEKGVLSADRLILGPQRDEEKLFVWLQNLPHFSYKSDSEILAI
DERGRNRKLLIFDKIL
>Mature_176_residues
MRILSCGSMFKLSRRMQLIYDHLLPGKPVWDFCCDHGYMGLNAYESGLFTEVHFVDQVPHIIERLEQRFQNEYFREDSAC
QAFFHPQPGGALELSIQGSVVIAGVGAHSILEIIRSLTEKGVLSADRLILGPQRDEEKLFVWLQNLPHFSYKSDSEILAI
DERGRNRKLLIFDKIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20224; Mature: 20224

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILSCGSMFKLSRRMQLIYDHLLPGKPVWDFCCDHGYMGLNAYESGLFTEVHFVDQVPH
CEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHH
IIERLEQRFQNEYFREDSACQAFFHPQPGGALELSIQGSVVIAGVGAHSILEIIRSLTEK
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHC
GVLSADRLILGPQRDEEKLFVWLQNLPHFSYKSDSEILAIDERGRNRKLLIFDKIL
CCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCC
>Mature Secondary Structure
MRILSCGSMFKLSRRMQLIYDHLLPGKPVWDFCCDHGYMGLNAYESGLFTEVHFVDQVPH
CEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHH
IIERLEQRFQNEYFREDSACQAFFHPQPGGALELSIQGSVVIAGVGAHSILEIIRSLTEK
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHC
GVLSADRLILGPQRDEEKLFVWLQNLPHFSYKSDSEILAIDERGRNRKLLIFDKIL
CCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA