| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522272
Identifier: 42522272
GI number: 42522272
Start: 634244
End: 634774
Strand: Direct
Name: 42522272
Synonym: Bd0685
Alternate gene names: NA
Gene position: 634244-634774 (Clockwise)
Preceding gene: 42522269
Following gene: 42522273
Centisome position: 16.77
GC content: 50.09
Gene sequence:
>531_bases ATGAGGATTCTATCTTGCGGCTCCATGTTCAAACTCTCGCGCCGCATGCAGCTTATTTACGATCATCTTCTGCCCGGAAA GCCCGTCTGGGACTTCTGTTGCGACCACGGCTATATGGGTTTAAACGCCTATGAAAGCGGTTTGTTCACCGAGGTTCACT TTGTCGACCAGGTCCCGCACATCATCGAGCGCCTGGAGCAGCGCTTTCAGAATGAGTACTTCCGCGAAGATTCAGCCTGT CAGGCGTTTTTCCACCCGCAGCCGGGAGGAGCTCTTGAGCTGTCCATCCAAGGCAGCGTGGTGATCGCCGGAGTGGGGGC TCACTCTATTCTGGAAATTATCAGATCTTTGACGGAAAAAGGTGTTCTGAGTGCGGACCGATTGATATTGGGTCCACAGC GTGACGAAGAAAAACTGTTTGTGTGGCTGCAAAATCTGCCGCATTTTTCGTACAAAAGTGATTCCGAAATCCTTGCGATC GACGAAAGAGGTCGAAACCGTAAGTTGTTGATATTCGATAAAATTCTGTAA
Upstream 100 bases:
>100_bases CGGCAAAGTCGACCATGCGGGCGCCCAGCTTTTCATGTGTGTCTGCTAAAGGTGTCTTTTTCATGCGGTTGCATAATCCT TTCCCCGTGACATTCAGTCA
Downstream 100 bases:
>100_bases TGTTCGGCGAGTTTTTGACGCGCTCCGAATAGCTATATTAAATGTCTGTAAGACTGTGAACAAAATATTGATTATCAGAG GACCTGCACATAATTGTGTC
Product: putative SAM-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MRILSCGSMFKLSRRMQLIYDHLLPGKPVWDFCCDHGYMGLNAYESGLFTEVHFVDQVPHIIERLEQRFQNEYFREDSAC QAFFHPQPGGALELSIQGSVVIAGVGAHSILEIIRSLTEKGVLSADRLILGPQRDEEKLFVWLQNLPHFSYKSDSEILAI DERGRNRKLLIFDKIL
Sequences:
>Translated_176_residues MRILSCGSMFKLSRRMQLIYDHLLPGKPVWDFCCDHGYMGLNAYESGLFTEVHFVDQVPHIIERLEQRFQNEYFREDSAC QAFFHPQPGGALELSIQGSVVIAGVGAHSILEIIRSLTEKGVLSADRLILGPQRDEEKLFVWLQNLPHFSYKSDSEILAI DERGRNRKLLIFDKIL >Mature_176_residues MRILSCGSMFKLSRRMQLIYDHLLPGKPVWDFCCDHGYMGLNAYESGLFTEVHFVDQVPHIIERLEQRFQNEYFREDSAC QAFFHPQPGGALELSIQGSVVIAGVGAHSILEIIRSLTEKGVLSADRLILGPQRDEEKLFVWLQNLPHFSYKSDSEILAI DERGRNRKLLIFDKIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20224; Mature: 20224
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILSCGSMFKLSRRMQLIYDHLLPGKPVWDFCCDHGYMGLNAYESGLFTEVHFVDQVPH CEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHH IIERLEQRFQNEYFREDSACQAFFHPQPGGALELSIQGSVVIAGVGAHSILEIIRSLTEK HHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHC GVLSADRLILGPQRDEEKLFVWLQNLPHFSYKSDSEILAIDERGRNRKLLIFDKIL CCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCC >Mature Secondary Structure MRILSCGSMFKLSRRMQLIYDHLLPGKPVWDFCCDHGYMGLNAYESGLFTEVHFVDQVPH CEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHH IIERLEQRFQNEYFREDSACQAFFHPQPGGALELSIQGSVVIAGVGAHSILEIIRSLTEK HHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHC GVLSADRLILGPQRDEEKLFVWLQNLPHFSYKSDSEILAIDERGRNRKLLIFDKIL CCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA