Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522269

Identifier: 42522269

GI number: 42522269

Start: 631525

End: 632508

Strand: Direct

Name: 42522269

Synonym: Bd0682

Alternate gene names: NA

Gene position: 631525-632508 (Clockwise)

Preceding gene: 42522268

Following gene: 42522272

Centisome position: 16.69

GC content: 46.54

Gene sequence:

>984_bases
ATGATCTGCACGAAATTTTGCGAAAAAATTTTGATCACCTGTGTGACGCTTTTTGCGTTGAATGCCTTTGCATTGGATGC
TGGTGCCGAAAAGTTAAAGCTGCCTCAGCTGCCGCAGATCAAGGCGCCTGAAGCCGTTCGTATTGAAGTTAAGCCCGTGG
CTCGACCGGAAGGATCTTTGATCCTGGACAATGCCCTGGGTAAAAATCTTAAGGACTTTCAGACTTTTTTGAAAACTCAG
GGGCCTCGTACTGGAGGCGGTGGAAATTCCTGTGCTCTTTCCATTCACCAGAACACAGAGAAGCTTGTCAGTTTGCTTTC
TGAGATGCCCACGCTGTTGAGCGAGGGGCAAAGAGCTTTCTTGCTGCACAAGATATCCGTGGCTAAGTTTTACCTAAGTG
AAGATCTGACTCTGGATGGGCAGACAAAGGACGCCATTAACTATCCGAACACCAATGAGATTTATTTATCCAATAAGCTA
TGCGGGCTGGACCTGCTGGATGTGCAGAGCCGTGCGATGGCTATCCTTCTGCATGAATATCTGGGGCTTGCTAACATTGA
TGATCGTCGGTACCAGATATCCGGTGCCTTCCTGCAAAACTATTCAACCTTCAATGCCCGTGGATATACCTTCACCGCTG
ATAATTCATATAAAGCACATACCGGACAATGTGTTCAGTCTGTTCTTCAGATGCAGCAAATCGGAAACAATTTAATTATT
TCAACTTCGTCGAAACCTGGCGCGAGGATCATCCCATTAACGCGCCAACATGTTGAAGAGTTCCAGGCCTTGGGTGAACG
AATTTGGGGAGCTGAAAAGACGGTCACCGTAGCCGACAGGGAAATGGGTGTGGACTATGTGTTTTCCAGCGAAAGTTGCG
GCACCGTAAGTTGTGAATACTTAAGAATTAAAAAGGGCGATGTAACCATAAAGACTATTAAGAATGCCACCAATGGGCTG
TCGACTATTGATTGCAAACGCTAG

Upstream 100 bases:

>100_bases
TATCGATCTTTTCCGGGTTTAAGCGGCTGTCTCATTTTGAGACATGGCCGTGGTATGTCCTTTGCTTTCTTAAAAACTAA
AGAATGCAAAGGACACTTCA

Downstream 100 bases:

>100_bases
TGGGCCCAGATTTTGGACATAAAAAAAGCCGACTTATTCAGTCAGCTTTCTTTGCGGATCTTTCCAGAGGAAAGATTTGG
TGCCCCGCGAGGGACTTGAA

Product: putative yir2 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MICTKFCEKILITCVTLFALNAFALDAGAEKLKLPQLPQIKAPEAVRIEVKPVARPEGSLILDNALGKNLKDFQTFLKTQ
GPRTGGGGNSCALSIHQNTEKLVSLLSEMPTLLSEGQRAFLLHKISVAKFYLSEDLTLDGQTKDAINYPNTNEIYLSNKL
CGLDLLDVQSRAMAILLHEYLGLANIDDRRYQISGAFLQNYSTFNARGYTFTADNSYKAHTGQCVQSVLQMQQIGNNLII
STSSKPGARIIPLTRQHVEEFQALGERIWGAEKTVTVADREMGVDYVFSSESCGTVSCEYLRIKKGDVTIKTIKNATNGL
STIDCKR

Sequences:

>Translated_327_residues
MICTKFCEKILITCVTLFALNAFALDAGAEKLKLPQLPQIKAPEAVRIEVKPVARPEGSLILDNALGKNLKDFQTFLKTQ
GPRTGGGGNSCALSIHQNTEKLVSLLSEMPTLLSEGQRAFLLHKISVAKFYLSEDLTLDGQTKDAINYPNTNEIYLSNKL
CGLDLLDVQSRAMAILLHEYLGLANIDDRRYQISGAFLQNYSTFNARGYTFTADNSYKAHTGQCVQSVLQMQQIGNNLII
STSSKPGARIIPLTRQHVEEFQALGERIWGAEKTVTVADREMGVDYVFSSESCGTVSCEYLRIKKGDVTIKTIKNATNGL
STIDCKR
>Mature_327_residues
MICTKFCEKILITCVTLFALNAFALDAGAEKLKLPQLPQIKAPEAVRIEVKPVARPEGSLILDNALGKNLKDFQTFLKTQ
GPRTGGGGNSCALSIHQNTEKLVSLLSEMPTLLSEGQRAFLLHKISVAKFYLSEDLTLDGQTKDAINYPNTNEIYLSNKL
CGLDLLDVQSRAMAILLHEYLGLANIDDRRYQISGAFLQNYSTFNARGYTFTADNSYKAHTGQCVQSVLQMQQIGNNLII
STSSKPGARIIPLTRQHVEEFQALGERIWGAEKTVTVADREMGVDYVFSSESCGTVSCEYLRIKKGDVTIKTIKNATNGL
STIDCKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36052; Mature: 36052

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICTKFCEKILITCVTLFALNAFALDAGAEKLKLPQLPQIKAPEAVRIEVKPVARPEGSL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCE
ILDNALGKNLKDFQTFLKTQGPRTGGGGNSCALSIHQNTEKLVSLLSEMPTLLSEGQRAF
EEEHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEE
LLHKISVAKFYLSEDLTLDGQTKDAINYPNTNEIYLSNKLCGLDLLDVQSRAMAILLHEY
EEEHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
LGLANIDDRRYQISGAFLQNYSTFNARGYTFTADNSYKAHTGQCVQSVLQMQQIGNNLII
HCCCCCCCCEEEEEHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
STSSKPGARIIPLTRQHVEEFQALGERIWGAEKTVTVADREMGVDYVFSSESCGTVSCEY
EECCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCEEEECCCCCCCEEEEE
LRIKKGDVTIKTIKNATNGLSTIDCKR
EEEECCCEEEEEECCCCCCCCEECCCC
>Mature Secondary Structure
MICTKFCEKILITCVTLFALNAFALDAGAEKLKLPQLPQIKAPEAVRIEVKPVARPEGSL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCE
ILDNALGKNLKDFQTFLKTQGPRTGGGGNSCALSIHQNTEKLVSLLSEMPTLLSEGQRAF
EEEHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEE
LLHKISVAKFYLSEDLTLDGQTKDAINYPNTNEIYLSNKLCGLDLLDVQSRAMAILLHEY
EEEHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
LGLANIDDRRYQISGAFLQNYSTFNARGYTFTADNSYKAHTGQCVQSVLQMQQIGNNLII
HCCCCCCCCEEEEEHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
STSSKPGARIIPLTRQHVEEFQALGERIWGAEKTVTVADREMGVDYVFSSESCGTVSCEY
EECCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCEEEECCCCCCCEEEEE
LRIKKGDVTIKTIKNATNGLSTIDCKR
EEEECCCEEEEEECCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA