| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
Click here to switch to the map view.
The map label for this gene is 42522273
Identifier: 42522273
GI number: 42522273
Start: 634830
End: 635354
Strand: Direct
Name: 42522273
Synonym: Bd0687
Alternate gene names: NA
Gene position: 634830-635354 (Clockwise)
Preceding gene: 42522272
Following gene: 42522275
Centisome position: 16.78
GC content: 45.52
Gene sequence:
>525_bases GTGAACAAAATATTGATTATCAGAGGACCTGCACATAATTGTGTCCTCATGCAGGATGTAAATAAAAACTCAGATTTTAG ACAATTTCTTGAAGATGAATTGGCTCGTCGTAGCCAAAACTATCCCCGTTACTCTTTGCGTGCGTTCGCCCGTCACCTGG AAGTGGACTCGTCTTTCTTGTCCAAAATCCTCAACGGCAAACGTACCGTGACGATGAGAACGATTCGTATGTTCGGGGAG CGTTTGAACCTGAATTCGGAAGAGCTTCAGCGTTTTGGTGAAATCAGCCGAGAGAAAAAAATGAAGCGCAAACTGGAGCG TCTATTGGAAAAGATGCCTAGTGAAGAGCGCGAGCATTCCACAATCACTATCAATGTGGATGAGGCCCGTTTGGACGAGG CGAAAGAGAAAATCAAAGGTTTCCGTCGTGAACTGGCTCAGTTCCTTGATAATGGCGTGGTTCAGGGCAAGACTTACCAG ATTTCTGTCTCTTTGATTCCTGTAGCCAGCTACGCAGCTGAATAA
Upstream 100 bases:
>100_bases AGAGGTCGAAACCGTAAGTTGTTGATATTCGATAAAATTCTGTAATGTTCGGCGAGTTTTTGACGCGCTCCGAATAGCTA TATTAAATGTCTGTAAGACT
Downstream 100 bases:
>100_bases GCGGCGTCTAAAAAATCAACTCGACACCAAAACCGAGGGAAGCCCCCTCGGTTTTTTTATTGCTCCAGCTCTGCCCCTGG CGGGCTATTGCACATCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MNKILIIRGPAHNCVLMQDVNKNSDFRQFLEDELARRSQNYPRYSLRAFARHLEVDSSFLSKILNGKRTVTMRTIRMFGE RLNLNSEELQRFGEISREKKMKRKLERLLEKMPSEEREHSTITINVDEARLDEAKEKIKGFRRELAQFLDNGVVQGKTYQ ISVSLIPVASYAAE
Sequences:
>Translated_174_residues MNKILIIRGPAHNCVLMQDVNKNSDFRQFLEDELARRSQNYPRYSLRAFARHLEVDSSFLSKILNGKRTVTMRTIRMFGE RLNLNSEELQRFGEISREKKMKRKLERLLEKMPSEEREHSTITINVDEARLDEAKEKIKGFRRELAQFLDNGVVQGKTYQ ISVSLIPVASYAAE >Mature_174_residues MNKILIIRGPAHNCVLMQDVNKNSDFRQFLEDELARRSQNYPRYSLRAFARHLEVDSSFLSKILNGKRTVTMRTIRMFGE RLNLNSEELQRFGEISREKKMKRKLERLLEKMPSEEREHSTITINVDEARLDEAKEKIKGFRRELAQFLDNGVVQGKTYQ ISVSLIPVASYAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20363; Mature: 20363
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKILIIRGPAHNCVLMQDVNKNSDFRQFLEDELARRSQNYPRYSLRAFARHLEVDSSFL CCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHH SKILNGKRTVTMRTIRMFGERLNLNSEELQRFGEISREKKMKRKLERLLEKMPSEEREHS HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TITINVDEARLDEAKEKIKGFRRELAQFLDNGVVQGKTYQISVSLIPVASYAAE EEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHCCC >Mature Secondary Structure MNKILIIRGPAHNCVLMQDVNKNSDFRQFLEDELARRSQNYPRYSLRAFARHLEVDSSFL CCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHH SKILNGKRTVTMRTIRMFGERLNLNSEELQRFGEISREKKMKRKLERLLEKMPSEEREHS HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TITINVDEARLDEAKEKIKGFRRELAQFLDNGVVQGKTYQISVSLIPVASYAAE EEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA