Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is menA

Identifier: 42522156

GI number: 42522156

Start: 516447

End: 517514

Strand: Direct

Name: menA

Synonym: Bd0558

Alternate gene names: NA

Gene position: 516447-517514 (Clockwise)

Preceding gene: 42522155

Following gene: 42522157

Centisome position: 13.65

GC content: 51.5

Gene sequence:

>1068_bases
GTGAGTGAACTGATCACGCTTTCCAAAAAAGACGCCCAGTTTGAATCCTATTTGCTGGGGACGTTCTCCAAAACACACCG
GGCTCTGCCGCAGCAGACCCTGAACGTCAATTCCGCGTCGGAGCTGGTGACGTTTCGTGTGCTGCCGTTAAACGAGATCA
CCAAACCTTCTTTCTGGGCCAAGATGTCCCAGATTTACAAGGTGCGCACCTTCCTTCTGATCTTTCTGCCGCTGTTTCTG
ATTCTGACCAAGAATATCGACGATCAAACCATGCAAGATCCGGTGACCACGGCGATTGCCACCATCGGTGTTTTGCTGGC
GTTTATCTCCATTAACTTGCGCAACGACTATATGGACCATATGAAGGGTGTTGATCGAGTGCTGGAACGTTCCGGCAGCC
GTGCCATCCAAAATGGCTGGATCACGGCTGCTCAGGTGAAACATCTTTCCTCTTTCTTCCTTTTCATGGCGCTGGTGTGT
GCGGTGCCACTGCTGTTTGCTTTCCCGCAACTGGCGGGGATCTTTGCGGTCAGTCTGGTTGTCGGCTTGTGGGCTCAGTT
TAAAAAACAGAATTCCTTCAAGTACCGCATCGGGGGTGAATTCGCTCTGTTTGTGATGCTGGGGCCTTTGTTGACTGTGG
GCTTTCAGATCGCGATGGGGGTTCCGGGGGATGTGGAAGCGTTCTGGCTGGGCTGTGTGTGGGGTTGGCTGGTGCTCTTT
GTTGTGCACCTTAGAAACTTCATGAATATCTTCCCCAGCAGTCAGGCGGGATTCACGAACACCGTGAACTGGCTGGGTTT
TGATAAGGCCCGTCGTCTGATTGCCGGCTGGTGGATTCTGTTCCTGGTTTTCAATCTGACCTATCATCTGACATACGCTG
GTTTTTACTGGGGTGTCTATCTGACGGTGGTTCTGGCTTTTGCCTCTGTGGGTTTCATCTATAAGTTGAAAAATATCTCA
AGCCCCGTGGGCAGTGAGATGCGCAAGGTGTTCCGCTCTGGTTTTTATCTGTTCCTGATCGCCATTGGCATGTGGGTCTT
TGAGTGTCTTTGGTATCTGCTTCGCTAG

Upstream 100 bases:

>100_bases
ATCTGGAGCGCCTGAAGTCCCTGTTGAAGCCGGGCGAAGAAAAGCTGATTGATCAACTGCGCCCGCTGACCGAGATTTTG
TACTGGAGAAGGAAGCCTTC

Downstream 100 bases:

>100_bases
ACGGCGGCCTCCGCATTTGTGTTCGGGCTTCCGCCCCGGAAGTCCACGACAAGGCTGTCGCCTGGGCGTCTTTTCTGAAG
GCGCCACTGAACCCTGAAAA

Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSELITLSKKDAQFESYLLGTFSKTHRALPQQTLNVNSASELVTFRVLPLNEITKPSFWAKMSQIYKVRTFLLIFLPLFL
ILTKNIDDQTMQDPVTTAIATIGVLLAFISINLRNDYMDHMKGVDRVLERSGSRAIQNGWITAAQVKHLSSFFLFMALVC
AVPLLFAFPQLAGIFAVSLVVGLWAQFKKQNSFKYRIGGEFALFVMLGPLLTVGFQIAMGVPGDVEAFWLGCVWGWLVLF
VVHLRNFMNIFPSSQAGFTNTVNWLGFDKARRLIAGWWILFLVFNLTYHLTYAGFYWGVYLTVVLAFASVGFIYKLKNIS
SPVGSEMRKVFRSGFYLFLIAIGMWVFECLWYLLR

Sequences:

>Translated_355_residues
MSELITLSKKDAQFESYLLGTFSKTHRALPQQTLNVNSASELVTFRVLPLNEITKPSFWAKMSQIYKVRTFLLIFLPLFL
ILTKNIDDQTMQDPVTTAIATIGVLLAFISINLRNDYMDHMKGVDRVLERSGSRAIQNGWITAAQVKHLSSFFLFMALVC
AVPLLFAFPQLAGIFAVSLVVGLWAQFKKQNSFKYRIGGEFALFVMLGPLLTVGFQIAMGVPGDVEAFWLGCVWGWLVLF
VVHLRNFMNIFPSSQAGFTNTVNWLGFDKARRLIAGWWILFLVFNLTYHLTYAGFYWGVYLTVVLAFASVGFIYKLKNIS
SPVGSEMRKVFRSGFYLFLIAIGMWVFECLWYLLR
>Mature_354_residues
SELITLSKKDAQFESYLLGTFSKTHRALPQQTLNVNSASELVTFRVLPLNEITKPSFWAKMSQIYKVRTFLLIFLPLFLI
LTKNIDDQTMQDPVTTAIATIGVLLAFISINLRNDYMDHMKGVDRVLERSGSRAIQNGWITAAQVKHLSSFFLFMALVCA
VPLLFAFPQLAGIFAVSLVVGLWAQFKKQNSFKYRIGGEFALFVMLGPLLTVGFQIAMGVPGDVEAFWLGCVWGWLVLFV
VHLRNFMNIFPSSQAGFTNTVNWLGFDKARRLIAGWWILFLVFNLTYHLTYAGFYWGVYLTVVLAFASVGFIYKLKNISS
PVGSEMRKVFRSGFYLFLIAIGMWVFECLWYLLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40418; Mature: 40287

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELITLSKKDAQFESYLLGTFSKTHRALPQQTLNVNSASELVTFRVLPLNEITKPSFWA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHEEEEECCHHCCCCHHHH
KMSQIYKVRTFLLIFLPLFLILTKNIDDQTMQDPVTTAIATIGVLLAFISINLRNDYMDH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKGVDRVLERSGSRAIQNGWITAAQVKHLSSFFLFMALVCAVPLLFAFPQLAGIFAVSLV
HHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLWAQFKKQNSFKYRIGGEFALFVMLGPLLTVGFQIAMGVPGDVEAFWLGCVWGWLVLF
HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VVHLRNFMNIFPSSQAGFTNTVNWLGFDKARRLIAGWWILFLVFNLTYHLTYAGFYWGVY
HHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTVVLAFASVGFIYKLKNISSPVGSEMRKVFRSGFYLFLIAIGMWVFECLWYLLR
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SELITLSKKDAQFESYLLGTFSKTHRALPQQTLNVNSASELVTFRVLPLNEITKPSFWA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHEEEEECCHHCCCCHHHH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HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA