| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521967
Identifier: 42521967
GI number: 42521967
Start: 329202
End: 330077
Strand: Direct
Name: 42521967
Synonym: Bd0347
Alternate gene names: NA
Gene position: 329202-330077 (Clockwise)
Preceding gene: 42521964
Following gene: 42521968
Centisome position: 8.7
GC content: 50.8
Gene sequence:
>876_bases ATGATCAACTCTCTGGCTTATGCAAGTCTTGAGCGTGTTTCCACGAATCTGCAGTCGTTCTATCAGCTGCGTCTGAATCG CATCCACAAATTCAAAGCCAAGATCCATATTCAGTCAGATGTGGGTCCTTTTGAAATTAAAACGGTGACCGATGTCGAAG AACTAAAAGAGGCGCTGGCTTTGCGTTACGAGGTCTTCCACCGTGAAATGCAGGGCAAGAAAGCCCCGACAGGGGTGGAC GTCGATGAATTTGACTTTGACTGTGACCACCTGATCATCAAAGAAAAGCGCAGCAATCGAATTGTGGGAACCTACAGATT GAACTGCTCTTTGTTCACGGATGAATTTTATTCCGGCAAAGAATTCATGATGAATGGAATTCTGGCTCAGCCGGGTGTGA AGCTGGAGCTGGGGCGCGCCTGCATTCACAAGGATTTCCGTCGCGGGGTTTTGATCTCGCTTTTGTGGCGTGGAATTGCC GAATACATGGCGGCCTCAGATTCCAAGATGCTTTTTGGTTGCGCGACGGTGAAGACGGATGATCCCCGCGATGCAGCCCT GTTGACTCGGTACTTTGAAGAGGAAGGGCGTATTGTGCCGGGGCTTCGCACCCGTCCGACGCTGGCCTTTACAATGCCTA TGCTGAATCATTTTTTAGAAGAAGTCCGAAGCCCTCTCACGGAGACTCAGAGAGCCCAGGCTGAGGAACTTCTTCCTCCT TTGTGCCGCGCCTATTTGAAAGCCGGAGCCTATATCGGTGGGGAGCCGGCATGGGATCGTGAATTCCAGTGCATTGACTT CTTGACCATTCTCCATCGGGAAGATTTAAATAGGACCCTGTGGAAGCGATTCAAGCTGGACTCCGCGGAGTCCTAA
Upstream 100 bases:
>100_bases ATAGCCCTTTAAGGGAATGCCAACAATATCCTGTCGGAGTTCTGACAATCTTCACATTTAAAGCCCGCTACACTGAGGTT GATCTTAAGGGGGGCCTTCG
Downstream 100 bases:
>100_bases AACTTACTGTCTTTGTTCTGATTATCCTGACATTCATGTTGTGGTCGTATATCTGCCATCTGGTGGTGCGCGACCCGCAG AAAAGGCTTCAGCGCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Ornithine-Acyl N-Acyltransferase; Acyl-CoA N-Acyltransferase; Acyl-CoA N-Acyltransferases Superfamily Protein; Nudix Hydrolase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MINSLAYASLERVSTNLQSFYQLRLNRIHKFKAKIHIQSDVGPFEIKTVTDVEELKEALALRYEVFHREMQGKKAPTGVD VDEFDFDCDHLIIKEKRSNRIVGTYRLNCSLFTDEFYSGKEFMMNGILAQPGVKLELGRACIHKDFRRGVLISLLWRGIA EYMAASDSKMLFGCATVKTDDPRDAALLTRYFEEEGRIVPGLRTRPTLAFTMPMLNHFLEEVRSPLTETQRAQAEELLPP LCRAYLKAGAYIGGEPAWDREFQCIDFLTILHREDLNRTLWKRFKLDSAES
Sequences:
>Translated_291_residues MINSLAYASLERVSTNLQSFYQLRLNRIHKFKAKIHIQSDVGPFEIKTVTDVEELKEALALRYEVFHREMQGKKAPTGVD VDEFDFDCDHLIIKEKRSNRIVGTYRLNCSLFTDEFYSGKEFMMNGILAQPGVKLELGRACIHKDFRRGVLISLLWRGIA EYMAASDSKMLFGCATVKTDDPRDAALLTRYFEEEGRIVPGLRTRPTLAFTMPMLNHFLEEVRSPLTETQRAQAEELLPP LCRAYLKAGAYIGGEPAWDREFQCIDFLTILHREDLNRTLWKRFKLDSAES >Mature_291_residues MINSLAYASLERVSTNLQSFYQLRLNRIHKFKAKIHIQSDVGPFEIKTVTDVEELKEALALRYEVFHREMQGKKAPTGVD VDEFDFDCDHLIIKEKRSNRIVGTYRLNCSLFTDEFYSGKEFMMNGILAQPGVKLELGRACIHKDFRRGVLISLLWRGIA EYMAASDSKMLFGCATVKTDDPRDAALLTRYFEEEGRIVPGLRTRPTLAFTMPMLNHFLEEVRSPLTETQRAQAEELLPP LCRAYLKAGAYIGGEPAWDREFQCIDFLTILHREDLNRTLWKRFKLDSAES
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33554; Mature: 33554
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINSLAYASLERVSTNLQSFYQLRLNRIHKFKAKIHIQSDVGPFEIKTVTDVEELKEALA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHHHHH LRYEVFHREMQGKKAPTGVDVDEFDFDCDHLIIKEKRSNRIVGTYRLNCSLFTDEFYSGK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEECCCCEEEEEEEEEEEEECCCHHCCH EFMMNGILAQPGVKLELGRACIHKDFRRGVLISLLWRGIAEYMAASDSKMLFGCATVKTD HHHHHCHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC DPRDAALLTRYFEEEGRIVPGLRTRPTLAFTMPMLNHFLEEVRSPLTETQRAQAEELLPP CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCRAYLKAGAYIGGEPAWDREFQCIDFLTILHREDLNRTLWKRFKLDSAES HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MINSLAYASLERVSTNLQSFYQLRLNRIHKFKAKIHIQSDVGPFEIKTVTDVEELKEALA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHHHHH LRYEVFHREMQGKKAPTGVDVDEFDFDCDHLIIKEKRSNRIVGTYRLNCSLFTDEFYSGK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEECCCCEEEEEEEEEEEEECCCHHCCH EFMMNGILAQPGVKLELGRACIHKDFRRGVLISLLWRGIAEYMAASDSKMLFGCATVKTD HHHHHCHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC DPRDAALLTRYFEEEGRIVPGLRTRPTLAFTMPMLNHFLEEVRSPLTETQRAQAEELLPP CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCRAYLKAGAYIGGEPAWDREFQCIDFLTILHREDLNRTLWKRFKLDSAES HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA