| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is rhlE [H]
Identifier: 42521938
GI number: 42521938
Start: 302718
End: 304139
Strand: Direct
Name: rhlE [H]
Synonym: Bd0316
Alternate gene names: 42521938
Gene position: 302718-304139 (Clockwise)
Preceding gene: 42521937
Following gene: 42521942
Centisome position: 8.0
GC content: 53.87
Gene sequence:
>1422_bases TTGGGCGAAGGCTCAAAGCCGCTTTTTTTTGTCTCTTTTCAACGGGTTGTGGTACACCTGCCCGCTATGAAATTGCATAA TTCCCCCGTTCGCGCCCATACCTTTCAGGAAATGAACCTGGCACCCGTGCTGTTGCCGGCTTTAACGAAAATGAAAATCT CCAAACCGACGCCGGTGCAAAGCCAGGCGATCCCGGCAAGCCTGGATGGTTCTGATATCATCGCCATCGCCCAAACCGGC AGCGGCAAGACGCTGGCTTTCGCCTTGTCTTTGCTGACCACTTTGCAGAAGAAACCTGAGGCGCGTGGTTTGATTCTGGT GCCCAGCCGTGAAATGGCCCAGCAGATCTACAAGGTCTTTCTGGAGCTTTGTGCAGAAATGCCGGTGTCTGTGTGTCTGG CAATCGGCGGGACCACGGGTTCCAAACAAGCCAACCAACTGAAGAAAAATCCGCGTCTGATCATCGCGACTCCGGGTCGC ATGAATGACCATCTCTCCGGCAACAAGCTGCTTTTGCAGAATGTGGAAGTGATCGTCCTGGATGAAGCCGACCGCATGCT GGACATGGGCTTTGCCCCGCAGCTTCGCACGATTCAAAGCACCCTGCGTGGTCCGCGCCAGACGATGATGTTCTCGGCAA GTTTTGGTTCCAATGTGGAATCCATCGCACAACTGTTCATGAAACCTGATGTGGTGATGGTGCGTTCGGAAAAAGCCGAA GCCCCGGTGGAAAGTCTGAAGCAAAAAGTGCTGTTCCTGGATCGTTCCATGAAAAATGACCGTTTGCTGGATGAACTCAA CGCCACTCGCGGCGGTGTGATTGTCTTCACGGGCAATCAGGAAAACTGCGAGGCAGTCGGGAACTATTTGAAGGAATACG GCTTTTCGACCGACCTGATTCACGGGGGGCTTTCTCAGGGACAAAGAAACCGTGTGGTGCGAGGCTTCCGCGAAGGTGAA ATCCGCATCGTGGTGGCGACCGATCTGCTGGCGCGGGGCCTGGATGTGCCGCATGTGGATCATGTGGTGAATTTTGATCT GCCATTCCAGTCAGAGGACTTCCTGCACCGAATCGGACGGACCGCTCGCGCGGGCCGTGGTGGTGAGGCCATCACCTTTG TCACGCCGTCAGACACACGCATGTACGCCAAAATCAAAGGCTACTTGCAGGGCGCTCAGGAAATCAAAGTCGATCCGACT TTTGCCTTCATTGATCGCTCGAAAAAGTTTGATAAAAACAAACCTGCCAAAGGCAATGAACCTGCGCGCCGAAATGCGCC GGGGAAACCTCAAGCCGTGAAAAAGGCGGCTCCTGCCGGCAAGCCAAAAAGCAAGGGTGGCAAAATCAACCCCTTTGCCG GCAAGACGGTAGCACCCAAAAAATCGGGTGCAAAGAAATCAGGATTTGCGAAGAGAAAATAA
Upstream 100 bases:
>100_bases TTGTATGTTGAGCAGGTGTCCGAGATCGTCAATGAGCCAAATTACGAAGCGGCTTTGGCGTCTTTGAAGTAATCAGGTCT GTTATAATTGCAAAGCGGCT
Downstream 100 bases:
>100_bases ACAAAAGGCCCTCTGAAAAGAGGGCCTTTTTAGTTAGATCTTTTTAGCCTGATTAGGCAGGCAAAGTCCCTGCATCAGGA TCTTGTTCGTCCAGGAAAAG
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MGEGSKPLFFVSFQRVVVHLPAMKLHNSPVRAHTFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTG SGKTLAFALSLLTTLQKKPEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKNPRLIIATPGR MNDHLSGNKLLLQNVEVIVLDEADRMLDMGFAPQLRTIQSTLRGPRQTMMFSASFGSNVESIAQLFMKPDVVMVRSEKAE APVESLKQKVLFLDRSMKNDRLLDELNATRGGVIVFTGNQENCEAVGNYLKEYGFSTDLIHGGLSQGQRNRVVRGFREGE IRIVVATDLLARGLDVPHVDHVVNFDLPFQSEDFLHRIGRTARAGRGGEAITFVTPSDTRMYAKIKGYLQGAQEIKVDPT FAFIDRSKKFDKNKPAKGNEPARRNAPGKPQAVKKAAPAGKPKSKGGKINPFAGKTVAPKKSGAKKSGFAKRK
Sequences:
>Translated_473_residues MGEGSKPLFFVSFQRVVVHLPAMKLHNSPVRAHTFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTG SGKTLAFALSLLTTLQKKPEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKNPRLIIATPGR MNDHLSGNKLLLQNVEVIVLDEADRMLDMGFAPQLRTIQSTLRGPRQTMMFSASFGSNVESIAQLFMKPDVVMVRSEKAE APVESLKQKVLFLDRSMKNDRLLDELNATRGGVIVFTGNQENCEAVGNYLKEYGFSTDLIHGGLSQGQRNRVVRGFREGE IRIVVATDLLARGLDVPHVDHVVNFDLPFQSEDFLHRIGRTARAGRGGEAITFVTPSDTRMYAKIKGYLQGAQEIKVDPT FAFIDRSKKFDKNKPAKGNEPARRNAPGKPQAVKKAAPAGKPKSKGGKINPFAGKTVAPKKSGAKKSGFAKRK >Mature_472_residues GEGSKPLFFVSFQRVVVHLPAMKLHNSPVRAHTFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGS GKTLAFALSLLTTLQKKPEARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKNPRLIIATPGRM NDHLSGNKLLLQNVEVIVLDEADRMLDMGFAPQLRTIQSTLRGPRQTMMFSASFGSNVESIAQLFMKPDVVMVRSEKAEA PVESLKQKVLFLDRSMKNDRLLDELNATRGGVIVFTGNQENCEAVGNYLKEYGFSTDLIHGGLSQGQRNRVVRGFREGEI RIVVATDLLARGLDVPHVDHVVNFDLPFQSEDFLHRIGRTARAGRGGEAITFVTPSDTRMYAKIKGYLQGAQEIKVDPTF AFIDRSKKFDKNKPAKGNEPARRNAPGKPQAVKKAAPAGKPKSKGGKINPFAGKTVAPKKSGAKKSGFAKRK
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=374, Percent_Identity=38.5026737967914, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI4758138, Length=380, Percent_Identity=35, Blast_Score=241, Evalue=9e-64, Organism=Homo sapiens, GI224593278, Length=395, Percent_Identity=37.2151898734177, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=36.1930294906166, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI45446747, Length=376, Percent_Identity=35.1063829787234, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI45446743, Length=376, Percent_Identity=35.1063829787234, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=36.1930294906166, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=36.1930294906166, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI222352149, Length=363, Percent_Identity=37.465564738292, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI21071032, Length=388, Percent_Identity=35.8247422680412, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI148613856, Length=376, Percent_Identity=36.1702127659575, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI38201710, Length=376, Percent_Identity=36.1702127659575, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI41327771, Length=397, Percent_Identity=34.5088161209068, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=35.752688172043, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=35.752688172043, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI41327773, Length=366, Percent_Identity=37.9781420765027, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI262118318, Length=402, Percent_Identity=34.0796019900498, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI262231852, Length=402, Percent_Identity=34.0796019900498, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI13518015, Length=402, Percent_Identity=34.0796019900498, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI216548263, Length=402, Percent_Identity=34.0796019900498, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI41327776, Length=373, Percent_Identity=35.9249329758713, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI31542656, Length=365, Percent_Identity=34.7945205479452, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI55749865, Length=364, Percent_Identity=32.967032967033, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI7661920, Length=358, Percent_Identity=33.7988826815642, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI83700235, Length=364, Percent_Identity=35.7142857142857, Blast_Score=205, Evalue=1e-52, Organism=Homo sapiens, GI188035877, Length=361, Percent_Identity=35.1800554016621, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI4503529, Length=365, Percent_Identity=35.3424657534247, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI51094101, Length=350, Percent_Identity=36.8571428571429, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI164419743, Length=350, Percent_Identity=36.8571428571429, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI13129006, Length=338, Percent_Identity=34.6153846153846, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI21040371, Length=389, Percent_Identity=32.9048843187661, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI164664518, Length=383, Percent_Identity=32.1148825065274, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI38569505, Length=372, Percent_Identity=33.3333333333333, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38327634, Length=367, Percent_Identity=34.8773841961853, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI38569503, Length=372, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI50659095, Length=335, Percent_Identity=33.4328358208955, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI4758112, Length=404, Percent_Identity=30.9405940594059, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI18375623, Length=404, Percent_Identity=30.9405940594059, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI13514831, Length=391, Percent_Identity=31.2020460358056, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=30.4239401496259, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI41327779, Length=362, Percent_Identity=34.5303867403315, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI17505907, Length=446, Percent_Identity=26.9058295964126, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI6005743, Length=364, Percent_Identity=33.2417582417582, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI8922886, Length=364, Percent_Identity=32.967032967033, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI256223453, Length=355, Percent_Identity=28.7323943661972, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI164419732, Length=360, Percent_Identity=30.8333333333333, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI62241022, Length=339, Percent_Identity=33.0383480825959, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI256773275, Length=390, Percent_Identity=30.7692307692308, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI154759257, Length=420, Percent_Identity=28.5714285714286, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI62241024, Length=316, Percent_Identity=33.5443037974684, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI9966805, Length=375, Percent_Identity=27.7333333333333, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI4826686, Length=347, Percent_Identity=26.2247838616715, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI20336298, Length=206, Percent_Identity=32.5242718446602, Blast_Score=105, Evalue=1e-22, Organism=Escherichia coli, GI1787016, Length=368, Percent_Identity=37.5, Blast_Score=243, Evalue=2e-65, Organism=Escherichia coli, GI87082221, Length=359, Percent_Identity=35.933147632312, Blast_Score=221, Evalue=1e-58, Organism=Escherichia coli, GI1787605, Length=366, Percent_Identity=36.0655737704918, Blast_Score=211, Evalue=1e-55, Organism=Escherichia coli, GI1790214, Length=406, Percent_Identity=33.2512315270936, Blast_Score=208, Evalue=5e-55, Organism=Escherichia coli, GI1788930, Length=354, Percent_Identity=35.8757062146893, Blast_Score=208, Evalue=5e-55, Organism=Escherichia coli, GI48994977, Length=364, Percent_Identity=25.2747252747253, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17555296, Length=425, Percent_Identity=34.1176470588235, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI115533224, Length=372, Percent_Identity=36.8279569892473, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI32565321, Length=398, Percent_Identity=35.1758793969849, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI86570094, Length=364, Percent_Identity=37.0879120879121, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17507945, Length=383, Percent_Identity=37.0757180156658, Blast_Score=225, Evalue=4e-59, Organism=Caenorhabditis elegans, GI71995724, Length=358, Percent_Identity=36.5921787709497, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI17507121, Length=358, Percent_Identity=36.3128491620112, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI71987143, Length=361, Percent_Identity=33.7950138504155, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=33.0687830687831, Blast_Score=221, Evalue=9e-58, Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=35.5371900826446, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17552642, Length=373, Percent_Identity=34.3163538873995, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=32.9787234042553, Blast_Score=219, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=34.8773841961853, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71995514, Length=369, Percent_Identity=34.6883468834688, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=34.8773841961853, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17510559, Length=386, Percent_Identity=32.9015544041451, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17507877, Length=422, Percent_Identity=32.2274881516588, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17537549, Length=369, Percent_Identity=33.8753387533875, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI17507881, Length=375, Percent_Identity=31.4666666666667, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17509811, Length=376, Percent_Identity=31.9148936170213, Blast_Score=194, Evalue=7e-50, Organism=Caenorhabditis elegans, GI17552114, Length=383, Percent_Identity=32.6370757180157, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17507879, Length=438, Percent_Identity=30.1369863013699, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71999646, Length=352, Percent_Identity=32.1022727272727, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71999644, Length=352, Percent_Identity=32.1022727272727, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71982858, Length=358, Percent_Identity=31.8435754189944, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17505370, Length=352, Percent_Identity=33.8068181818182, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI71990816, Length=362, Percent_Identity=32.3204419889503, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI193208216, Length=394, Percent_Identity=29.6954314720812, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI193206561, Length=344, Percent_Identity=30.5232558139535, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17508543, Length=391, Percent_Identity=30.1790281329923, Blast_Score=164, Evalue=7e-41, Organism=Caenorhabditis elegans, GI17507641, Length=404, Percent_Identity=28.960396039604, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI25148203, Length=427, Percent_Identity=24.824355971897, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17556951, Length=386, Percent_Identity=30.3108808290155, Blast_Score=148, Evalue=5e-36, Organism=Caenorhabditis elegans, GI32564046, Length=396, Percent_Identity=28.7878787878788, Blast_Score=147, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17536099, Length=377, Percent_Identity=27.8514588859416, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17536101, Length=377, Percent_Identity=27.8514588859416, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17536103, Length=379, Percent_Identity=27.9683377308707, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI25148205, Length=334, Percent_Identity=24.251497005988, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI71997889, Length=445, Percent_Identity=26.2921348314607, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17553716, Length=377, Percent_Identity=25.1989389920424, Blast_Score=118, Evalue=8e-27, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=44.4444444444444, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71982862, Length=228, Percent_Identity=29.8245614035088, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI25148291, Length=368, Percent_Identity=23.3695652173913, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17557982, Length=385, Percent_Identity=22.0779220779221, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17565430, Length=393, Percent_Identity=22.9007633587786, Blast_Score=78, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321856, Length=361, Percent_Identity=40.9972299168975, Blast_Score=259, Evalue=7e-70, Organism=Saccharomyces cerevisiae, GI6324778, Length=384, Percent_Identity=36.71875, Blast_Score=245, Evalue=9e-66, Organism=Saccharomyces cerevisiae, GI6325138, Length=384, Percent_Identity=35.4166666666667, Blast_Score=236, Evalue=7e-63, Organism=Saccharomyces cerevisiae, GI6324217, Length=392, Percent_Identity=35.969387755102, Blast_Score=227, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6321360, Length=354, Percent_Identity=37.2881355932203, Blast_Score=222, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6323021, Length=364, Percent_Identity=35.989010989011, Blast_Score=215, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6321963, Length=359, Percent_Identity=36.4902506963788, Blast_Score=210, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6320224, Length=374, Percent_Identity=33.4224598930481, Blast_Score=207, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6323947, Length=359, Percent_Identity=35.6545961002786, Blast_Score=203, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6324620, Length=364, Percent_Identity=34.3406593406593, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6320173, Length=467, Percent_Identity=28.4796573875803, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6320449, Length=381, Percent_Identity=31.2335958005249, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6320041, Length=388, Percent_Identity=31.701030927835, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=371, Percent_Identity=33.1536388140162, Blast_Score=183, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=357, Percent_Identity=31.9327731092437, Blast_Score=179, Evalue=9e-46, Organism=Saccharomyces cerevisiae, GI6320119, Length=364, Percent_Identity=31.8681318681319, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6322912, Length=353, Percent_Identity=33.1444759206799, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6322323, Length=353, Percent_Identity=33.1444759206799, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6321267, Length=353, Percent_Identity=35.4107648725212, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=364, Percent_Identity=30.4945054945055, Blast_Score=150, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6320400, Length=411, Percent_Identity=29.1970802919708, Blast_Score=147, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6319618, Length=417, Percent_Identity=26.8585131894484, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6324366, Length=344, Percent_Identity=27.0348837209302, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6323306, Length=316, Percent_Identity=27.8481012658228, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6322876, Length=189, Percent_Identity=36.5079365079365, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6320497, Length=357, Percent_Identity=23.249299719888, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI24585582, Length=363, Percent_Identity=38.8429752066116, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI24662330, Length=398, Percent_Identity=36.1809045226131, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24642151, Length=363, Percent_Identity=37.1900826446281, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI21355075, Length=369, Percent_Identity=37.1273712737127, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI17985987, Length=430, Percent_Identity=33.4883720930233, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24644483, Length=389, Percent_Identity=33.6760925449871, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644479, Length=389, Percent_Identity=33.6760925449871, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI281361218, Length=389, Percent_Identity=33.6760925449871, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644481, Length=389, Percent_Identity=33.6760925449871, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644487, Length=389, Percent_Identity=33.6760925449871, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI45551833, Length=389, Percent_Identity=33.6760925449871, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24644485, Length=389, Percent_Identity=33.6760925449871, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI18857967, Length=413, Percent_Identity=34.6246973365617, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI17977678, Length=385, Percent_Identity=35.0649350649351, Blast_Score=232, Evalue=4e-61, Organism=Drosophila melanogaster, GI24584399, Length=377, Percent_Identity=33.6870026525199, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI17136814, Length=363, Percent_Identity=36.0881542699724, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI28574962, Length=360, Percent_Identity=36.1111111111111, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=36.3636363636364, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24584994, Length=396, Percent_Identity=33.0808080808081, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI28575014, Length=351, Percent_Identity=35.8974358974359, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI24645031, Length=358, Percent_Identity=33.7988826815642, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=33.5149863760218, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=33.5149863760218, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=33.5149863760218, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=33.5149863760218, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24583281, Length=355, Percent_Identity=31.5492957746479, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI24583279, Length=355, Percent_Identity=31.5492957746479, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI28571808, Length=373, Percent_Identity=32.7077747989276, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI28571809, Length=373, Percent_Identity=32.7077747989276, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24666101, Length=358, Percent_Identity=34.6368715083799, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=34.1772151898734, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI17647335, Length=376, Percent_Identity=32.9787234042553, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24581954, Length=397, Percent_Identity=30.7304785894207, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24581952, Length=397, Percent_Identity=30.7304785894207, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24581956, Length=397, Percent_Identity=30.7304785894207, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI21355559, Length=363, Percent_Identity=33.3333333333333, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI17136666, Length=432, Percent_Identity=28.2407407407407, Blast_Score=158, Evalue=7e-39, Organism=Drosophila melanogaster, GI24642822, Length=407, Percent_Identity=31.4496314496315, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24643725, Length=392, Percent_Identity=26.0204081632653, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI20130173, Length=341, Percent_Identity=26.3929618768328, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24640164, Length=415, Percent_Identity=24.3373493975904, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI19920478, Length=356, Percent_Identity=27.8089887640449, Blast_Score=115, Evalue=8e-26, Organism=Drosophila melanogaster, GI24668515, Length=337, Percent_Identity=25.2225519287834, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI28571338, Length=211, Percent_Identity=31.7535545023697, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI18859659, Length=211, Percent_Identity=31.7535545023697, Blast_Score=103, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 51636; Mature: 51505
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEGSKPLFFVSFQRVVVHLPAMKLHNSPVRAHTFQEMNLAPVLLPALTKMKISKPTPVQ CCCCCCCEEEEEHHHHHHHCCHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCC SQAIPASLDGSDIIAIAQTGSGKTLAFALSLLTTLQKKPEARGLILVPSREMAQQIYKVF CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHH LELCAEMPVSVCLAIGGTTGSKQANQLKKNPRLIIATPGRMNDHLSGNKLLLQNVEVIVL HHHHHHCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCEEEE DEADRMLDMGFAPQLRTIQSTLRGPRQTMMFSASFGSNVESIAQLFMKPDVVMVRSEKAE CCCHHHHHCCCCCHHHHHHHHHCCCCHHEEEECCCCCCHHHHHHHHHCCCEEEEECCCCC APVESLKQKVLFLDRSMKNDRLLDELNATRGGVIVFTGNQENCEAVGNYLKEYGFSTDLI CCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHH HGGLSQGQRNRVVRGFREGEIRIVVATDLLARGLDVPHVDHVVNFDLPFQSEDFLHRIGR HCCCCCCHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHH TARAGRGGEAITFVTPSDTRMYAKIKGYLQGAQEIKVDPTFAFIDRSKKFDKNKPAKGNE HHCCCCCCCEEEEECCCCCEEHHHHHHHHCCCHHEECCCCEEEEECCCCCCCCCCCCCCC PARRNAPGKPQAVKKAAPAGKPKSKGGKINPFAGKTVAPKKSGAKKSGFAKRK CHHCCCCCCCHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GEGSKPLFFVSFQRVVVHLPAMKLHNSPVRAHTFQEMNLAPVLLPALTKMKISKPTPVQ CCCCCCEEEEEHHHHHHHCCHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCC SQAIPASLDGSDIIAIAQTGSGKTLAFALSLLTTLQKKPEARGLILVPSREMAQQIYKVF CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHH LELCAEMPVSVCLAIGGTTGSKQANQLKKNPRLIIATPGRMNDHLSGNKLLLQNVEVIVL HHHHHHCCCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCEEEE DEADRMLDMGFAPQLRTIQSTLRGPRQTMMFSASFGSNVESIAQLFMKPDVVMVRSEKAE CCCHHHHHCCCCCHHHHHHHHHCCCCHHEEEECCCCCCHHHHHHHHHCCCEEEEECCCCC APVESLKQKVLFLDRSMKNDRLLDELNATRGGVIVFTGNQENCEAVGNYLKEYGFSTDLI CCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHH HGGLSQGQRNRVVRGFREGEIRIVVATDLLARGLDVPHVDHVVNFDLPFQSEDFLHRIGR HCCCCCCHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHH TARAGRGGEAITFVTPSDTRMYAKIKGYLQGAQEIKVDPTFAFIDRSKKFDKNKPAKGNE HHCCCCCCCEEEEECCCCCEEHHHHHHHHCCCHHEECCCCEEEEECCCCCCCCCCCCCCC PARRNAPGKPQAVKKAAPAGKPKSKGGKINPFAGKTVAPKKSGAKKSGFAKRK CHHCCCCCCCHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA