| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
Click here to switch to the map view.
The map label for this gene is 42521841
Identifier: 42521841
GI number: 42521841
Start: 202226
End: 202696
Strand: Direct
Name: 42521841
Synonym: Bd0213
Alternate gene names: NA
Gene position: 202226-202696 (Clockwise)
Preceding gene: 42521840
Following gene: 42521842
Centisome position: 5.35
GC content: 50.11
Gene sequence:
>471_bases ATGACCGAAGCTGACGTACAATCTATCGCTTTGTTTTTCTATTTTGCCCTGCTTGATGATCAAAAAGCGATAGAGGCTTC ATCCCAAGCGCTGGCCCTTTGTCGGGCTCGCAAGGCGCGAAATCCTGATTTAAAAAATTCTGTCGCCATTGTTGCCGCGA CCAAAACGGTCTGGGACAAGTTTAAAGTGCGTGTTTCCCGCGGGCGTCCCAACACCACGGTGGAATCCGGCTGGCTGATC CCGGATGCCGTCGATCTGGGCCCATGGCGTGAATTTCAAAAATCCGCCTCAGAAGACGAGCTATTGACTGTTATTTGGTC TAAAATCCTGAAGATAAGTGACGATGATATTTCGGCCGGTTTGGGCATCACCGAAGGCACCATTCGATATCGATTGGGCC GGGCTTTGCGCAAACTGGGAAGCATGACCCAAGGTGTGAGTAAACTAAAGCATGGCTCAGCAGGAAAATAA
Upstream 100 bases:
>100_bases TCGACCAGCTTGACCTTCTCAGACAGCTTACAGTCGATTAGTATAGTAAGGGCATCCACAAACGGATGCCCTCGAACGCA CGAATGGACTTAAAGGTGCT
Downstream 100 bases:
>100_bases AGTTCAGCTCTCCAAAAAAAACAAAAGAGAGATTTCTCCGTTCATCGGGCATGAGCTGCTTTATGACTATTTGACGGGGA CTCTGGATCCCGAACGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTEADVQSIALFFYFALLDDQKAIEASSQALALCRARKARNPDLKNSVAIVAATKTVWDKFKVRVSRGRPNTTVESGWLI PDAVDLGPWREFQKSASEDELLTVIWSKILKISDDDISAGLGITEGTIRYRLGRALRKLGSMTQGVSKLKHGSAGK
Sequences:
>Translated_156_residues MTEADVQSIALFFYFALLDDQKAIEASSQALALCRARKARNPDLKNSVAIVAATKTVWDKFKVRVSRGRPNTTVESGWLI PDAVDLGPWREFQKSASEDELLTVIWSKILKISDDDISAGLGITEGTIRYRLGRALRKLGSMTQGVSKLKHGSAGK >Mature_155_residues TEADVQSIALFFYFALLDDQKAIEASSQALALCRARKARNPDLKNSVAIVAATKTVWDKFKVRVSRGRPNTTVESGWLIP DAVDLGPWREFQKSASEDELLTVIWSKILKISDDDISAGLGITEGTIRYRLGRALRKLGSMTQGVSKLKHGSAGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17152; Mature: 17021
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEADVQSIALFFYFALLDDQKAIEASSQALALCRARKARNPDLKNSVAIVAATKTVWDK CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHH FKVRVSRGRPNTTVESGWLIPDAVDLGPWREFQKSASEDELLTVIWSKILKISDDDISAG HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC LGITEGTIRYRLGRALRKLGSMTQGVSKLKHGSAGK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TEADVQSIALFFYFALLDDQKAIEASSQALALCRARKARNPDLKNSVAIVAATKTVWDK CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHH FKVRVSRGRPNTTVESGWLIPDAVDLGPWREFQKSASEDELLTVIWSKILKISDDDISAG HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC LGITEGTIRYRLGRALRKLGSMTQGVSKLKHGSAGK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA