Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521842

Identifier: 42521842

GI number: 42521842

Start: 202767

End: 203633

Strand: Direct

Name: 42521842

Synonym: Bd0214

Alternate gene names: NA

Gene position: 202767-203633 (Clockwise)

Preceding gene: 42521841

Following gene: 42521843

Centisome position: 5.36

GC content: 51.79

Gene sequence:

>867_bases
TTGACGGGGACTCTGGATCCCGAACGCCGTTCTGCAGTTGAAGATCATGTTAAATTTTCGCGTGATGCCCAGTTGGATCT
GGGAAAAATCGAAAATGGCCAGAAGTACGCCGAGTTGCTGGCGGACACGCGTGTGTCTGAACCGATTATTTCGCAAATCA
ATGCCCCTTCCAGCTATCTCACAGTCCTGATGCAAAAATCCAACTTCGACAAATGGCCTCAAGGTCTTAAATGGGGCCTC
GAAGCCCTGGTTGTTGTCGGGGTGATTGTGACTTTGCTGTCCGTGACTCCATGGCAGAAAGTCATGCAGTTGGGCAGTCT
GACTGGATCCAAAGAAGTGATTCTGGCGGAGGTTTCCAAAACTGAAACCGCCACGGTGGTGCAGGAAACTCCGGAATTCG
TGGATGAAGGGGCTAAAGAGACGGCTCCAGCTGTGACAGCGAAGACTCCGGATACACCTGCGGCAGCCACTCCGGCTCCG
GTGGCTTCAGCGACACCGACACCAGCGGCACCGGCTGCGGTGGCAGTAAAGCCGGATAAACCCGCAGAAACCGCACCTGC
GGCGGCCTCCGGTGGGTTCCTTTATCGTGGTGAAATCTCTGCGACTAACATTGAAAGCATTGGCCCTAAGATCAATGACA
AGATCCTTGAACTGGGTGGTCGTAAGGCCGGTTCCGTGGAGCTGGGTTGGAAGAAAACTCCGACATCCATGTATTATCAC
CTTACAATTCCTGAAGCGAAGTATCAGGACCTGATGAACTATCTGGGCACTTATGGGAAGACCAAATTTTCCAAAGAAAA
ACACCCTCGTGTGATGCCAGACGGAATCATTCGTCTGATCTTCACTTTGGATGAATCCAAAAAGTGA

Upstream 100 bases:

>100_bases
AAACTAAAGCATGGCTCAGCAGGAAAATAAAGTTCAGCTCTCCAAAAAAAACAAAAGAGAGATTTCTCCGTTCATCGGGC
ATGAGCTGCTTTATGACTAT

Downstream 100 bases:

>100_bases
AAACACTCCGGAAGAAACCCAAACGATCCCTGCGCACGATCCTGATCATCTGGTTCGTCCTGTTTTCAGTCGTGCCACTG
GCGTTCGTTACCGGTTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTGTLDPERRSAVEDHVKFSRDAQLDLGKIENGQKYAELLADTRVSEPIISQINAPSSYLTVLMQKSNFDKWPQGLKWGL
EALVVVGVIVTLLSVTPWQKVMQLGSLTGSKEVILAEVSKTETATVVQETPEFVDEGAKETAPAVTAKTPDTPAAATPAP
VASATPTPAAPAAVAVKPDKPAETAPAAASGGFLYRGEISATNIESIGPKINDKILELGGRKAGSVELGWKKTPTSMYYH
LTIPEAKYQDLMNYLGTYGKTKFSKEKHPRVMPDGIIRLIFTLDESKK

Sequences:

>Translated_288_residues
MTGTLDPERRSAVEDHVKFSRDAQLDLGKIENGQKYAELLADTRVSEPIISQINAPSSYLTVLMQKSNFDKWPQGLKWGL
EALVVVGVIVTLLSVTPWQKVMQLGSLTGSKEVILAEVSKTETATVVQETPEFVDEGAKETAPAVTAKTPDTPAAATPAP
VASATPTPAAPAAVAVKPDKPAETAPAAASGGFLYRGEISATNIESIGPKINDKILELGGRKAGSVELGWKKTPTSMYYH
LTIPEAKYQDLMNYLGTYGKTKFSKEKHPRVMPDGIIRLIFTLDESKK
>Mature_287_residues
TGTLDPERRSAVEDHVKFSRDAQLDLGKIENGQKYAELLADTRVSEPIISQINAPSSYLTVLMQKSNFDKWPQGLKWGLE
ALVVVGVIVTLLSVTPWQKVMQLGSLTGSKEVILAEVSKTETATVVQETPEFVDEGAKETAPAVTAKTPDTPAAATPAPV
ASATPTPAAPAAVAVKPDKPAETAPAAASGGFLYRGEISATNIESIGPKINDKILELGGRKAGSVELGWKKTPTSMYYHL
TIPEAKYQDLMNYLGTYGKTKFSKEKHPRVMPDGIIRLIFTLDESKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31008; Mature: 30877

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTLDPERRSAVEDHVKFSRDAQLDLGKIENGQKYAELLADTRVSEPIISQINAPSSYL
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHH
TVLMQKSNFDKWPQGLKWGLEALVVVGVIVTLLSVTPWQKVMQLGSLTGSKEVILAEVSK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCC
TETATVVQETPEFVDEGAKETAPAVTAKTPDTPAAATPAPVASATPTPAAPAAVAVKPDK
CHHHHHHHHCHHHHHCCHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
PAETAPAAASGGFLYRGEISATNIESIGPKINDKILELGGRKAGSVELGWKKTPTSMYYH
CCCCCCCCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHCCCCCCCEECCCCCCCCEEEEE
LTIPEAKYQDLMNYLGTYGKTKFSKEKHPRVMPDGIIRLIFTLDESKK
EECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEECCCCCC
>Mature Secondary Structure 
TGTLDPERRSAVEDHVKFSRDAQLDLGKIENGQKYAELLADTRVSEPIISQINAPSSYL
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHH
TVLMQKSNFDKWPQGLKWGLEALVVVGVIVTLLSVTPWQKVMQLGSLTGSKEVILAEVSK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCC
TETATVVQETPEFVDEGAKETAPAVTAKTPDTPAAATPAPVASATPTPAAPAAVAVKPDK
CHHHHHHHHCHHHHHCCHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
PAETAPAAASGGFLYRGEISATNIESIGPKINDKILELGGRKAGSVELGWKKTPTSMYYH
CCCCCCCCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHCCCCCCCEECCCCCCCCEEEEE
LTIPEAKYQDLMNYLGTYGKTKFSKEKHPRVMPDGIIRLIFTLDESKK
EECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA