Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521823

Identifier: 42521823

GI number: 42521823

Start: 177287

End: 177952

Strand: Direct

Name: 42521823

Synonym: Bd0191

Alternate gene names: NA

Gene position: 177287-177952 (Clockwise)

Preceding gene: 42521822

Following gene: 42521827

Centisome position: 4.69

GC content: 51.05

Gene sequence:

>666_bases
ATGCAGTCAGCGCAAGGTGCTCAGAAGCAAACTCCGGACAAGGTTGAAAGATTTCGTCTGTTGTGTGAGCGCCTCGCCCT
GGTTCTGCAAAAAGAGGGTTTGTCCGTCAAACCCTACCGTGACCCCGCTTTGCCGCACTTTAATCAGCTGAACGAAAGCC
AAAAAGACATCGCCCTTCACACCTTGAAGGACTATCTGGAAATCTGCCAGGAAGCCCACGCGGAAAGTTTCTCTTTAAAA
GATTCCCCACGCTTTTGCTGGAAGGCTTTGCGCCGCTGGGGCTTGATCCCGGCCTCTGATTTTTTCGACAAATTAGAAGA
ATCTGATTCTGTGGAAGTGTACACCGATGAAGGCCTGCAGGTGTTTCGAAATCTGCGCTTCTTTGAGGTTTGCACGTACA
CGCTGGAAGAGCTTTATTCTTTGGAGTGGTGGAAGCTGTACGGCCGTGAAGAATCTGTGACCCGCAGCCTTTTTTCAATC
TCTTTGGATTTGATCAACGGTCATATCCCAGGAACGATGAAGTTCGATACCGGCAAACACGAACTGTGGGAGCTGTCTTC
TGAGGGGATGCGCCGTTTTGTGGTCGAGCCGCGGCATGCGTGTTCTCTCCGTCGTAACGGAGAGATTCGGGGATTCCTAT
TTACGACGACGGTGGACTGTCTCTGA

Upstream 100 bases:

>100_bases
AACCTGCCCGAGTGCCACTTCAGGTACACTGATGGCCATCGAGGGAATTTTGCGGGATCAATTCAATCCAACAATTGAAG
TTATCCCGATGTGAGGATGA

Downstream 100 bases:

>100_bases
ACCCAGCTGTTCTTCAGCGGATCTTTTCATGCCCGGGGCTGTGGCTTCCATGGTGTCTTCGTTGCGGCTGACAATCACGG
CAGAATTTCCCAGGACTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MQSAQGAQKQTPDKVERFRLLCERLALVLQKEGLSVKPYRDPALPHFNQLNESQKDIALHTLKDYLEICQEAHAESFSLK
DSPRFCWKALRRWGLIPASDFFDKLEESDSVEVYTDEGLQVFRNLRFFEVCTYTLEELYSLEWWKLYGREESVTRSLFSI
SLDLINGHIPGTMKFDTGKHELWELSSEGMRRFVVEPRHACSLRRNGEIRGFLFTTTVDCL

Sequences:

>Translated_221_residues
MQSAQGAQKQTPDKVERFRLLCERLALVLQKEGLSVKPYRDPALPHFNQLNESQKDIALHTLKDYLEICQEAHAESFSLK
DSPRFCWKALRRWGLIPASDFFDKLEESDSVEVYTDEGLQVFRNLRFFEVCTYTLEELYSLEWWKLYGREESVTRSLFSI
SLDLINGHIPGTMKFDTGKHELWELSSEGMRRFVVEPRHACSLRRNGEIRGFLFTTTVDCL
>Mature_221_residues
MQSAQGAQKQTPDKVERFRLLCERLALVLQKEGLSVKPYRDPALPHFNQLNESQKDIALHTLKDYLEICQEAHAESFSLK
DSPRFCWKALRRWGLIPASDFFDKLEESDSVEVYTDEGLQVFRNLRFFEVCTYTLEELYSLEWWKLYGREESVTRSLFSI
SLDLINGHIPGTMKFDTGKHELWELSSEGMRRFVVEPRHACSLRRNGEIRGFLFTTTVDCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25835; Mature: 25835

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSAQGAQKQTPDKVERFRLLCERLALVLQKEGLSVKPYRDPALPHFNQLNESQKDIALH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHH
TLKDYLEICQEAHAESFSLKDSPRFCWKALRRWGLIPASDFFDKLEESDSVEVYTDEGLQ
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECHHHH
VFRNLRFFEVCTYTLEELYSLEWWKLYGREESVTRSLFSISLDLINGHIPGTMKFDTGKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCH
ELWELSSEGMRRFVVEPRHACSLRRNGEIRGFLFTTTVDCL
HHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECEECCC
>Mature Secondary Structure
MQSAQGAQKQTPDKVERFRLLCERLALVLQKEGLSVKPYRDPALPHFNQLNESQKDIALH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHH
TLKDYLEICQEAHAESFSLKDSPRFCWKALRRWGLIPASDFFDKLEESDSVEVYTDEGLQ
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECHHHH
VFRNLRFFEVCTYTLEELYSLEWWKLYGREESVTRSLFSISLDLINGHIPGTMKFDTGKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCH
ELWELSSEGMRRFVVEPRHACSLRRNGEIRGFLFTTTVDCL
HHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA