Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521809

Identifier: 42521809

GI number: 42521809

Start: 163507

End: 163947

Strand: Direct

Name: 42521809

Synonym: Bd0176

Alternate gene names: NA

Gene position: 163507-163947 (Clockwise)

Preceding gene: 42521808

Following gene: 42521817

Centisome position: 4.32

GC content: 51.47

Gene sequence:

>441_bases
TTGTTGCCACTTTTGGTGGTGCTGGCAGCATCCCAGTCCAAGGCGGTGTCCTGGAGAATCTTTGGCGCCTGCAAGAACTC
TCCTGTGCATGAGGGAACCTATCAGGCGGACTTGACTAAATCAGTGGGCGCTCTGAGCCTTGAAATCTTTGATGCGAATA
AGATCCCGTACGTGGGATCTGCGGAAGGCATCAATTCCATCATCAACAGCCCGATCGGTCTGGACAGCATTGAAGTTGTG
TCCGACACCGAACTGCGCGCTTATGGCTGGTGTTACACTATCAACGGCAAGCAGCCGACAGAAATGCCGGACAAGATTCA
ATTCAAATCCCAGGACGACAAGTTGACGTGGTTCTATGCGTACTCCACCAATAAGAATAATGAGTGGACCGACTATTGTT
CCCCGGCCTACTGGATCGCGGCCGATCAGTTCTGCAAATAA

Upstream 100 bases:

>100_bases
AGCCAGCCAGGCGCCTTGCCGGAAGAGATCTTTGAGCAGATCGTGGTGAAGGCCAAAGAAATCGACATGGAAGAGGTTCG
TCGTGAAAACTCTTAAGCCG

Downstream 100 bases:

>100_bases
AAAAAGCCCGGTGTTTCCACCGGGCTTTTTAGTATTCAAATTTGAATTCGAAATTACTTCTGGATCGTTACGTGTTTGAT
CACGATTGGTTCAACCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLPLLVVLAASQSKAVSWRIFGACKNSPVHEGTYQADLTKSVGALSLEIFDANKIPYVGSAEGINSIINSPIGLDSIEVV
SDTELRAYGWCYTINGKQPTEMPDKIQFKSQDDKLTWFYAYSTNKNNEWTDYCSPAYWIAADQFCK

Sequences:

>Translated_146_residues
MLPLLVVLAASQSKAVSWRIFGACKNSPVHEGTYQADLTKSVGALSLEIFDANKIPYVGSAEGINSIINSPIGLDSIEVV
SDTELRAYGWCYTINGKQPTEMPDKIQFKSQDDKLTWFYAYSTNKNNEWTDYCSPAYWIAADQFCK
>Mature_146_residues
MLPLLVVLAASQSKAVSWRIFGACKNSPVHEGTYQADLTKSVGALSLEIFDANKIPYVGSAEGINSIINSPIGLDSIEVV
SDTELRAYGWCYTINGKQPTEMPDKIQFKSQDDKLTWFYAYSTNKNNEWTDYCSPAYWIAADQFCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16275; Mature: 16275

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLLVVLAASQSKAVSWRIFGACKNSPVHEGTYQADLTKSVGALSLEIFDANKIPYVGS
CCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCCCC
AEGINSIINSPIGLDSIEVVSDTELRAYGWCYTINGKQPTEMPDKIQFKSQDDKLTWFYA
HHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEE
YSTNKNNEWTDYCSPAYWIAADQFCK
EECCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MLPLLVVLAASQSKAVSWRIFGACKNSPVHEGTYQADLTKSVGALSLEIFDANKIPYVGS
CCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCCCC
AEGINSIINSPIGLDSIEVVSDTELRAYGWCYTINGKQPTEMPDKIQFKSQDDKLTWFYA
HHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEE
YSTNKNNEWTDYCSPAYWIAADQFCK
EECCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA