| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41410350
Identifier: 41410350
GI number: 41410350
Start: 4720582
End: 4720851
Strand: Reverse
Name: 41410350
Synonym: MAP4252c
Alternate gene names: NA
Gene position: 4720851-4720582 (Counterclockwise)
Preceding gene: 41410366
Following gene: 41410349
Centisome position: 97.74
GC content: 69.63
Gene sequence:
>270_bases TTGCCGAGCCACCAATTCAGCCGGAGAAGAATTGACTTTCTCCGACCGGCCGCCGGGCGCCACGAGGAGGCAATCATGAC CGCAATTCGGTGCGACGATGTGGTGACCGCCACCCGGGTGCCGGCGGCCCGGCAGGCCCGCCCGCCGCGGCCCGCGCCGG CGGACTCGGGCAGCCCGTTGATGGACATGACCACCCGCCTGCTGGCCATCCCGCTGCACCAGTTGTACGCGTTGCTGTGG CGGGTGGGGATCATCGAGGTCAGGGCCTGA
Upstream 100 bases:
>100_bases GATTCCGCAGCGTGCCGGCCACGAAACCGTGGCCAACCATTCGGATTCAGGGCTTTACCGGAAATGGACAGGATAATTCC GGCTACCGAAGCCATGTCTT
Downstream 100 bases:
>100_bases GCGGGGGCCGGGCCGCGTTTCCCCGGCGCCGGGATGCGATGCGCTAACGTCGACGCGTGGCCCGCATCCGCAAGCTCGTC GCAGCGCTTCACCGCCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MPSHQFSRRRIDFLRPAAGRHEEAIMTAIRCDDVVTATRVPAARQARPPRPAPADSGSPLMDMTTRLLAIPLHQLYALLW RVGIIEVRA
Sequences:
>Translated_89_residues MPSHQFSRRRIDFLRPAAGRHEEAIMTAIRCDDVVTATRVPAARQARPPRPAPADSGSPLMDMTTRLLAIPLHQLYALLW RVGIIEVRA >Mature_88_residues PSHQFSRRRIDFLRPAAGRHEEAIMTAIRCDDVVTATRVPAARQARPPRPAPADSGSPLMDMTTRLLAIPLHQLYALLWR VGIIEVRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9982; Mature: 9851
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSHQFSRRRIDFLRPAAGRHEEAIMTAIRCDDVVTATRVPAARQARPPRPAPADSGSPL CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCHHCCCCCCCCCCCCCCCH MDMTTRLLAIPLHQLYALLWRVGIIEVRA HHHHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure PSHQFSRRRIDFLRPAAGRHEEAIMTAIRCDDVVTATRVPAARQARPPRPAPADSGSPL CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCHHCCCCCCCCCCCCCCCH MDMTTRLLAIPLHQLYALLWRVGIIEVRA HHHHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA