| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410366
Identifier: 41410366
GI number: 41410366
Start: 4737062
End: 4737370
Strand: Reverse
Name: 41410366
Synonym: MAP4268c
Alternate gene names: NA
Gene position: 4737370-4737062 (Counterclockwise)
Preceding gene: 41410367
Following gene: 41410350
Centisome position: 98.09
GC content: 64.08
Gene sequence:
>309_bases ATGACCAATCTTGATGACATGCGCCGTCGCCGTCCCGGCAACCGGACCCGTATCGACGCGATCAAGGCGGAGATGGACCG CGAGGTTGCCCAGTACCGTCTCCGCGAACTGCGCGAGGCTGCCGGCTACACGCAGACGACTCTCGCTGCGGCTATTGGCG TCGGGCAGAACCGCGTCTCGCAGATGGAACATGGCGATCTGGGCACGAGCCGGGTCGACACTCTCCGCAAGTACGTGGAA GCGACTGGGGGTGAGCTGGAAGTGTCCGTCAAGCGTCCGGACGGGTCACGGGTTCTCCTCAGCCTGTAA
Upstream 100 bases:
>100_bases ACATTCCCATTGCCGACGAGCTCTTCGATGCTCACCAAAAGCGTTTACACAAGGCAGCAGCCAAAGCCACCAATCGGAAA CCAAGGAAGGGAAAGAAACG
Downstream 100 bases:
>100_bases AGCGCGACGACCGAGACCCAGGGCGAAGGCTTCGAGAACGGTGTCCAGGTACCGGCTGCGGCTTGTGATTCTCGGGTGCC CTCGGCGCTCAGAAGCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MTNLDDMRRRRPGNRTRIDAIKAEMDREVAQYRLRELREAAGYTQTTLAAAIGVGQNRVSQMEHGDLGTSRVDTLRKYVE ATGGELEVSVKRPDGSRVLLSL
Sequences:
>Translated_102_residues MTNLDDMRRRRPGNRTRIDAIKAEMDREVAQYRLRELREAAGYTQTTLAAAIGVGQNRVSQMEHGDLGTSRVDTLRKYVE ATGGELEVSVKRPDGSRVLLSL >Mature_101_residues TNLDDMRRRRPGNRTRIDAIKAEMDREVAQYRLRELREAAGYTQTTLAAAIGVGQNRVSQMEHGDLGTSRVDTLRKYVEA TGGELEVSVKRPDGSRVLLSL
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11446; Mature: 11315
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLDDMRRRRPGNRTRIDAIKAEMDREVAQYRLRELREAAGYTQTTLAAAIGVGQNRVS CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH QMEHGDLGTSRVDTLRKYVEATGGELEVSVKRPDGSRVLLSL HHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEC >Mature Secondary Structure TNLDDMRRRRPGNRTRIDAIKAEMDREVAQYRLRELREAAGYTQTTLAAAIGVGQNRVS CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH QMEHGDLGTSRVDTLRKYVEATGGELEVSVKRPDGSRVLLSL HHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA