| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410349
Identifier: 41410349
GI number: 41410349
Start: 4719686
End: 4720525
Strand: Reverse
Name: 41410349
Synonym: MAP4251c
Alternate gene names: NA
Gene position: 4720525-4719686 (Counterclockwise)
Preceding gene: 41410350
Following gene: 41410348
Centisome position: 97.74
GC content: 73.1
Gene sequence:
>840_bases GTGGCCCGCATCCGCAAGCTCGTCGCAGCGCTTCACCGCCGTGGTCCGCACCGGGTTTTGCGGGGTGACCTGGCCTTTGC CGGACTGCCCGGGGTGGTGTACACGCCCGAGGAGGGGCTGAATCTGCCCGGGGTGGCGTTCGGCCACGACTGGCTCACCG GCGCCGCCCGCTATGCGAACCTGCTGGAGCATCTGGCGTCGTGGGGCATCGTGGCCGCCGCCCCCGACACCCAGCGGGGG TTGGCGCCGTCGGTGCTGAACTTTGCCTTCGACCTGGGGACCGCCCTGGAAATCGTGTCGGGGGTGCGGTTGGGGCCGGG CAAGATCAGCGTGCATCCGGCCAAGCTGGGGGTGGCCGGGCACGGTTTCGGCGCCTCGGCGGCGGTGTTCGCCGCGGCGG GCATGCCGGCCAAGCCCGCGGCGGTGGCGGCGGTCTTTCCCAGCGTGACCAGCCCGCCGGCCGAGCAGCCGGCGGCGACG CTGCGGGTGCCGGGCGTGATCCTCACCGCGCCGGGTGACGCGAAGACGCTGAACTCCAACGCGCTGGCGCTCGCCGAGGT GTGGGACGCCGCCACGGTGCGTGTCATCAGCAAGGCCGAACCGGGCGGGCTGGTCGAGGGCCGGCGGCTGACCAAGGTGG TGGGCCTCGCCGGCGCGCACCGGCGCACCCAGCGATCGGTCCGGGCGCTGCTGACCGGATACCTGCTCTACACGTTGGGC GGCGACAAGAAGTACCGCGACTTCGCCGATCCGCACGTGCAGCTGCCCGGGACGGCGGCCCCCGATCCCGAGGCCGGCGC CGTGCCGCTGGAAGAGAAGATCGTCGCCCTGCTGAAGTGA
Upstream 100 bases:
>100_bases ACGCGTTGCTGTGGCGGGTGGGGATCATCGAGGTCAGGGCCTGAGCGGGGGCCGGGCCGCGTTTCCCCGGCGCCGGGATG CGATGCGCTAACGTCGACGC
Downstream 100 bases:
>100_bases GGTGGCGGCGTGGTAAGTGTGTTTGATGCGAATCGGCATCGCTCTTAACTATTCGGGTGGCTTTCACGAGGCCGTGGACC GCGTGGTCGAACTCGAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MARIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEEGLNLPGVAFGHDWLTGAARYANLLEHLASWGIVAAAPDTQRG LAPSVLNFAFDLGTALEIVSGVRLGPGKISVHPAKLGVAGHGFGASAAVFAAAGMPAKPAAVAAVFPSVTSPPAEQPAAT LRVPGVILTAPGDAKTLNSNALALAEVWDAATVRVISKAEPGGLVEGRRLTKVVGLAGAHRRTQRSVRALLTGYLLYTLG GDKKYRDFADPHVQLPGTAAPDPEAGAVPLEEKIVALLK
Sequences:
>Translated_279_residues MARIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEEGLNLPGVAFGHDWLTGAARYANLLEHLASWGIVAAAPDTQRG LAPSVLNFAFDLGTALEIVSGVRLGPGKISVHPAKLGVAGHGFGASAAVFAAAGMPAKPAAVAAVFPSVTSPPAEQPAAT LRVPGVILTAPGDAKTLNSNALALAEVWDAATVRVISKAEPGGLVEGRRLTKVVGLAGAHRRTQRSVRALLTGYLLYTLG GDKKYRDFADPHVQLPGTAAPDPEAGAVPLEEKIVALLK >Mature_278_residues ARIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEEGLNLPGVAFGHDWLTGAARYANLLEHLASWGIVAAAPDTQRGL APSVLNFAFDLGTALEIVSGVRLGPGKISVHPAKLGVAGHGFGASAAVFAAAGMPAKPAAVAAVFPSVTSPPAEQPAATL RVPGVILTAPGDAKTLNSNALALAEVWDAATVRVISKAEPGGLVEGRRLTKVVGLAGAHRRTQRSVRALLTGYLLYTLGG DKKYRDFADPHVQLPGTAAPDPEAGAVPLEEKIVALLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28796; Mature: 28664
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEEGLNLPGVAFGHDWLTGAARYAN CHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCEEECHHHHHHHHHHHH LLEHLASWGIVAAAPDTQRGLAPSVLNFAFDLGTALEIVSGVRLGPGKISVHPAKLGVAG HHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCEEEEEHHHEEECC HGFGASAAVFAAAGMPAKPAAVAAVFPSVTSPPAEQPAATLRVPGVILTAPGDAKTLNSN CCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCC ALALAEVWDAATVRVISKAEPGGLVEGRRLTKVVGLAGAHRRTQRSVRALLTGYLLYTLG CEEHHHHHCHHHEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEC GDKKYRDFADPHVQLPGTAAPDPEAGAVPLEEKIVALLK CCCCCHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure ARIRKLVAALHRRGPHRVLRGDLAFAGLPGVVYTPEEGLNLPGVAFGHDWLTGAARYAN HHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCEEECHHHHHHHHHHHH LLEHLASWGIVAAAPDTQRGLAPSVLNFAFDLGTALEIVSGVRLGPGKISVHPAKLGVAG HHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEECCCEEEEEHHHEEECC HGFGASAAVFAAAGMPAKPAAVAAVFPSVTSPPAEQPAATLRVPGVILTAPGDAKTLNSN CCCCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCC ALALAEVWDAATVRVISKAEPGGLVEGRRLTKVVGLAGAHRRTQRSVRALLTGYLLYTLG CEEHHHHHCHHHEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEC GDKKYRDFADPHVQLPGTAAPDPEAGAVPLEEKIVALLK CCCCCHHCCCCCEECCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA