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The map label for this gene is bpoC_2

Identifier: 41410149

GI number: 41410149

Start: 4511514

End: 4512299

Strand: Direct

Name: bpoC_2

Synonym: MAP4051

Alternate gene names: 41410149

Gene position: 4511514-4512299 (Clockwise)

Preceding gene: 41410148

Following gene: 41410150

Centisome position: 93.41

GC content: 69.34

Gene sequence:

>786_bases
GTGATCAACCTGGCTTACGACGACCGCGGCTCCGGCGAGCCCGTGGTCTTTATCGCCGGCCACGGCGGCGCCGGACGGAC
CTGGCACCCCTATCAGGTCCCGGCCTTCCTGGCCGCCGGATACCGCGTCATCACCTTCGACAACCGCGACATCGGCGCCA
CCGAGAACGCGCAGGGATTCACGACGGAGACCATGGTCGCCGACACCGCGGCGCTGATCGAGGGGCTGAATGCGGCCCCC
GCCCGCATCGTCGGGATGTCGATGGGCGCCTTCATCGCCCAGGAGCTCATGCTGGCCCGGCCCGAGCTGGTCAGCGCCGC
GGTGCTGATGGGCACCCGCGGTCGGATGGACCGGGCCCGGCAGTTCTTCCGCGACGCCGAGGCCGAGCTGGCCGACGGCG
GCGTCGCACTGCCGGCGTCGTACGAGGCGAAAATCCGTCTGCTGGAAAACTTTTCGCGCAAGACGCTCAACGACGACACC
GCCGTCGCCGACTGGATCGCGATGTTTTCCACCTGGCCGGTCAAGTCCACGCCGGGCATGCGGGCCCAGCTCGACGTCGC
CCCCTACACCAACCGGTTGTCCGCCTACCGCAGCATCGCGACACCGGTGCTGGTGATCGGCTTCTCCGACGACGTGCTCA
CCCCGCCGTACCTGGGCCGCGAGGTCGCCGACGCGCTGCCCAACGGCCGCTACGTGCAGATCCCCGACACCGGTCACCTC
GGCTTCTTCGAGCGGGCCGACGCCGTCAACGCGGCCATGCTCAAGTTCTTCGGCGAGCAGCACTAG

Upstream 100 bases:

>100_bases
ACCCGGCCCGGTTGCGGGCCCTGGCCGCGCCCCCGCAGCGGCGGCAGTGGTGGATCGACCGGGTCACGGCCTGCCACGGG
CTGCTTGTACCGTCGTCCGG

Downstream 100 bases:

>100_bases
GCGCCCAACGTCGACTTGTGCGGCGAGATCGCGCCGGCGGGCCGCAACAACTCCACGTTGGGCGCCTCATCGACCGGCTG
TGACACGCTGTATGGGTGAA

Product: BpoC_2

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MINLAYDDRGSGEPVVFIAGHGGAGRTWHPYQVPAFLAAGYRVITFDNRDIGATENAQGFTTETMVADTAALIEGLNAAP
ARIVGMSMGAFIAQELMLARPELVSAAVLMGTRGRMDRARQFFRDAEAELADGGVALPASYEAKIRLLENFSRKTLNDDT
AVADWIAMFSTWPVKSTPGMRAQLDVAPYTNRLSAYRSIATPVLVIGFSDDVLTPPYLGREVADALPNGRYVQIPDTGHL
GFFERADAVNAAMLKFFGEQH

Sequences:

>Translated_261_residues
MINLAYDDRGSGEPVVFIAGHGGAGRTWHPYQVPAFLAAGYRVITFDNRDIGATENAQGFTTETMVADTAALIEGLNAAP
ARIVGMSMGAFIAQELMLARPELVSAAVLMGTRGRMDRARQFFRDAEAELADGGVALPASYEAKIRLLENFSRKTLNDDT
AVADWIAMFSTWPVKSTPGMRAQLDVAPYTNRLSAYRSIATPVLVIGFSDDVLTPPYLGREVADALPNGRYVQIPDTGHL
GFFERADAVNAAMLKFFGEQH
>Mature_261_residues
MINLAYDDRGSGEPVVFIAGHGGAGRTWHPYQVPAFLAAGYRVITFDNRDIGATENAQGFTTETMVADTAALIEGLNAAP
ARIVGMSMGAFIAQELMLARPELVSAAVLMGTRGRMDRARQFFRDAEAELADGGVALPASYEAKIRLLENFSRKTLNDDT
AVADWIAMFSTWPVKSTPGMRAQLDVAPYTNRLSAYRSIATPVLVIGFSDDVLTPPYLGREVADALPNGRYVQIPDTGHL
GFFERADAVNAAMLKFFGEQH

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 28293; Mature: 28293

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLAYDDRGSGEPVVFIAGHGGAGRTWHPYQVPAFLAAGYRVITFDNRDIGATENAQGF
CEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCCCC
TTETMVADTAALIEGLNAAPARIVGMSMGAFIAQELMLARPELVSAAVLMGTRGRMDRAR
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHH
QFFRDAEAELADGGVALPASYEAKIRLLENFSRKTLNDDTAVADWIAMFSTWPVKSTPGM
HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
RAQLDVAPYTNRLSAYRSIATPVLVIGFSDDVLTPPYLGREVADALPNGRYVQIPDTGHL
EEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCEEECCCCCCC
GFFERADAVNAAMLKFFGEQH
CCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MINLAYDDRGSGEPVVFIAGHGGAGRTWHPYQVPAFLAAGYRVITFDNRDIGATENAQGF
CEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCCCC
TTETMVADTAALIEGLNAAPARIVGMSMGAFIAQELMLARPELVSAAVLMGTRGRMDRAR
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHH
QFFRDAEAELADGGVALPASYEAKIRLLENFSRKTLNDDTAVADWIAMFSTWPVKSTPGM
HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
RAQLDVAPYTNRLSAYRSIATPVLVIGFSDDVLTPPYLGREVADALPNGRYVQIPDTGHL
EEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCEEECCCCCCC
GFFERADAVNAAMLKFFGEQH
CCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA