| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410092
Identifier: 41410092
GI number: 41410092
Start: 4451496
End: 4452560
Strand: Direct
Name: 41410092
Synonym: MAP3994
Alternate gene names: NA
Gene position: 4451496-4452560 (Clockwise)
Preceding gene: 41410091
Following gene: 41410099
Centisome position: 92.17
GC content: 70.05
Gene sequence:
>1065_bases GTGGCGGGTGAAACCAGAGCGAATGTCATTCCACTGCACACGAATCGGGGTCGGGTAGCGGCGCGTCGGAGAGCCGATCA ACGGGCCGAGTCAGCTCGCCAGCATCCTTCGCTGCTGTCCGATCCCAGCGGCCGCGCATCCGCCGAGCAGATCGCCGCGG TGGTCCGCGAGATCGATGATCACCGCCGCGCGGCCGGCGCGTCGTCGCCGGAGGCGCCGCTCAACGAGCTGGCGCAGCGG GTCGCCGCGGTCGCCGGGTTCCTGCGTCAGCGCCTCACCGGTGACTACAGCGTCGACGAGTTCGGCTTTGACCCGCATTT CAACAGCGCGATCGTGCGGCCCCTGCTGCGGGTCTTCTTCCGGTCCTGGTTCCGGGTCGAGGTGAGCGGCATCGAGAACC TCCCCGCCGAGGGCGCCGCGCTGGTGGTGGCCAATCACGCCGGGGTGTTGCCGTTCGACGGGCTGATGCTGTCGGTGGCC GTGCACGACGAGCACCCCGCGCACCGGGACCTGCGGCTGCTGGCCGCCGACATGGTGTTCGACCTGCCGGTGGTGGGCGA GGCGGCCCGTAAGGCCGGGCACACCATGGCCTGCACCACCGACGCGCACCGGCTGCTGGCCGCCGGCGAGCTGACCGCCG TGTTCCCGGAGGGCTACAAGGGGCTGGGCAAGCGGTTCGAGGACCGCTACCGGTTGCAGCGGTTCGGCCGCGGCGGGTTC GTCACCGCCGCGTTGCGGACCAAGGCGCCGATCATCCCGTGCTCGATCATCGGGTCCGAGGAGATCTACCCGATGCTGAC CGACGTCAAGCTGCTGGCCCGGCTGTTCGGGCTGCCCTACTTCCCGGTCACGCCGCTCTTCCCGTTGGCCGGGCCGATCG GGTTGGTGCCGCTGCCGTCGAAGTGGCACATCGCGTTCGGTGAGCCGATCTACACCGGCGACTACGCCGCCTCCGACGCC GACGACCCGATGGTCACCTTCGAGCTGACCGACCAGGTGCGCGAGACCATCCAGCAGACGCTGTACCGGCTGCTGGCCGG CCGCCGCAACATCTTCTTCGGCTGA
Upstream 100 bases:
>100_bases ATCCAGATCGGGTACGCTCCCTGGAGAGTCGCGCCATAGCCCTGGCCCAGCGCTGGGGTAGCCGAAATCCAATTCCGTGG GGTGGGGTCAGGTAGGTATC
Downstream 100 bases:
>100_bases GTTCTTCGGCCTGCCCGCCGAACGTCGAGTTGTTGGGCGATTAAGCCGTTTTTCGGCCCAACAACTCGACGCTGGCCGGC TTACTTGACCATGGTGAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MAGETRANVIPLHTNRGRVAARRRADQRAESARQHPSLLSDPSGRASAEQIAAVVREIDDHRRAAGASSPEAPLNELAQR VAAVAGFLRQRLTGDYSVDEFGFDPHFNSAIVRPLLRVFFRSWFRVEVSGIENLPAEGAALVVANHAGVLPFDGLMLSVA VHDEHPAHRDLRLLAADMVFDLPVVGEAARKAGHTMACTTDAHRLLAAGELTAVFPEGYKGLGKRFEDRYRLQRFGRGGF VTAALRTKAPIIPCSIIGSEEIYPMLTDVKLLARLFGLPYFPVTPLFPLAGPIGLVPLPSKWHIAFGEPIYTGDYAASDA DDPMVTFELTDQVRETIQQTLYRLLAGRRNIFFG
Sequences:
>Translated_354_residues MAGETRANVIPLHTNRGRVAARRRADQRAESARQHPSLLSDPSGRASAEQIAAVVREIDDHRRAAGASSPEAPLNELAQR VAAVAGFLRQRLTGDYSVDEFGFDPHFNSAIVRPLLRVFFRSWFRVEVSGIENLPAEGAALVVANHAGVLPFDGLMLSVA VHDEHPAHRDLRLLAADMVFDLPVVGEAARKAGHTMACTTDAHRLLAAGELTAVFPEGYKGLGKRFEDRYRLQRFGRGGF VTAALRTKAPIIPCSIIGSEEIYPMLTDVKLLARLFGLPYFPVTPLFPLAGPIGLVPLPSKWHIAFGEPIYTGDYAASDA DDPMVTFELTDQVRETIQQTLYRLLAGRRNIFFG >Mature_353_residues AGETRANVIPLHTNRGRVAARRRADQRAESARQHPSLLSDPSGRASAEQIAAVVREIDDHRRAAGASSPEAPLNELAQRV AAVAGFLRQRLTGDYSVDEFGFDPHFNSAIVRPLLRVFFRSWFRVEVSGIENLPAEGAALVVANHAGVLPFDGLMLSVAV HDEHPAHRDLRLLAADMVFDLPVVGEAARKAGHTMACTTDAHRLLAAGELTAVFPEGYKGLGKRFEDRYRLQRFGRGGFV TAALRTKAPIIPCSIIGSEEIYPMLTDVKLLARLFGLPYFPVTPLFPLAGPIGLVPLPSKWHIAFGEPIYTGDYAASDAD DPMVTFELTDQVRETIQQTLYRLLAGRRNIFFG
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML2427 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR016676 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: NA
Molecular weight: Translated: 38799; Mature: 38668
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGETRANVIPLHTNRGRVAARRRADQRAESARQHPSLLSDPSGRASAEQIAAVVREIDD CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH HRRAAGASSPEAPLNELAQRVAAVAGFLRQRLTGDYSVDEFGFDPHFNSAIVRPLLRVFF HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHH RSWFRVEVSGIENLPAEGAALVVANHAGVLPFDGLMLSVAVHDEHPAHRDLRLLAADMVF HHHHEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH DLPVVGEAARKAGHTMACTTDAHRLLAAGELTAVFPEGYKGLGKRFEDRYRLQRFGRGGF CCCCCCHHHHHCCCEEEEECHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCE VTAALRTKAPIIPCSIIGSEEIYPMLTDVKLLARLFGLPYFPVTPLFPLAGPIGLVPLPS EEEEHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEECCC KWHIAFGEPIYTGDYAASDADDPMVTFELTDQVRETIQQTLYRLLAGRRNIFFG CCEEEECCEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AGETRANVIPLHTNRGRVAARRRADQRAESARQHPSLLSDPSGRASAEQIAAVVREIDD CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH HRRAAGASSPEAPLNELAQRVAAVAGFLRQRLTGDYSVDEFGFDPHFNSAIVRPLLRVFF HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHH RSWFRVEVSGIENLPAEGAALVVANHAGVLPFDGLMLSVAVHDEHPAHRDLRLLAADMVF HHHHEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH DLPVVGEAARKAGHTMACTTDAHRLLAAGELTAVFPEGYKGLGKRFEDRYRLQRFGRGGF CCCCCCHHHHHCCCEEEEECHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCE VTAALRTKAPIIPCSIIGSEEIYPMLTDVKLLARLFGLPYFPVTPLFPLAGPIGLVPLPS EEEEHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEECCC KWHIAFGEPIYTGDYAASDADDPMVTFELTDQVRETIQQTLYRLLAGRRNIFFG CCEEEECCEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]