| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41410099
Identifier: 41410099
GI number: 41410099
Start: 4461660
End: 4461929
Strand: Direct
Name: 41410099
Synonym: MAP4001
Alternate gene names: NA
Gene position: 4461660-4461929 (Clockwise)
Preceding gene: 41410092
Following gene: 41410100
Centisome position: 92.38
GC content: 70.37
Gene sequence:
>270_bases ATGACGTCAGCCACCCCGCGGCCGCAGGTGGAGCTGCTTACCCGGGACGGGTGCACCATCTGCGAGCGCATCCACGCCCG GCTGGTCGAACTCGCCGCGGAATTGGGCTTCGAGCTGTCGACGACCGACGTCGACGCCGCCGCGGCGGCGGGCAATCCGG GGCTGCGCACCGAATTCGGCGACCGGTTGCCGGTGATCCTGCTCGACGGTCGCGAACACAGCTACTGGGACATCGACGAG CCACGGCTGCGCGCCGATCTCGCCCGCTGA
Upstream 100 bases:
>100_bases TGCATCACCACAGGGTCGACCCGCACCGTGTTGTCGCTCATAGCCGGAACGTAATGCCTGGTAACCCGCCCCACAAGTCA CCGATGCGACACTGGTCGCC
Downstream 100 bases:
>100_bases GCTCGGGCCGGCTGCCAAACGATTATTTGGTAGCCCAGCTGATAAACGTTTACCGTGGACAGCAGTTCAGTTACTGGAGG AAGCAAGGGAGCTGGCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTSATPRPQVELLTRDGCTICERIHARLVELAAELGFELSTTDVDAAAAAGNPGLRTEFGDRLPVILLDGREHSYWDIDE PRLRADLAR
Sequences:
>Translated_89_residues MTSATPRPQVELLTRDGCTICERIHARLVELAAELGFELSTTDVDAAAAAGNPGLRTEFGDRLPVILLDGREHSYWDIDE PRLRADLAR >Mature_88_residues TSATPRPQVELLTRDGCTICERIHARLVELAAELGFELSTTDVDAAAAAGNPGLRTEFGDRLPVILLDGREHSYWDIDEP RLRADLAR
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008554 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF05768 DUF836 [H]
EC number: NA
Molecular weight: Translated: 9817; Mature: 9686
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSATPRPQVELLTRDGCTICERIHARLVELAAELGFELSTTDVDAAAAAGNPGLRTEFG CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCC DRLPVILLDGREHSYWDIDEPRLRADLAR CCCCEEEEECCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure TSATPRPQVELLTRDGCTICERIHARLVELAAELGFELSTTDVDAAAAAGNPGLRTEFG CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCC DRLPVILLDGREHSYWDIDEPRLRADLAR CCCCEEEEECCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]