| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is hbhA [H]
Identifier: 41410066
GI number: 41410066
Start: 4428497
End: 4429084
Strand: Direct
Name: hbhA [H]
Synonym: MAP3968
Alternate gene names: 41410066
Gene position: 4428497-4429084 (Clockwise)
Preceding gene: 41410065
Following gene: 41410067
Centisome position: 91.69
GC content: 71.77
Gene sequence:
>588_bases ATGAAAGGAACAACCATGGCGGAAAACCCGAACATCGACGACTTGCGAGCCCCGCTGCTCGCGGCCCTGGGCGCGGCCGA CCTGGCCCTGGCCACGGTCAACGACCTGATCGCCAACCTGCGCGAGCGGGCCGAGGAGACCCGCGCCGAGACCCGCACCC GGGTCGAGGAGCGCCGCGCCCGGCTGACCAAGTTCCAGGAGGACCTGCCCGAGCAGTTCACCGAGCTGCGCGACAAGTTC ACCACCGAGGAGCTGCGCAAGGCGGCCGAGGGCTACCTGGAGGCGGCGACCAACCGGTACAACGAGCTGGTCGAGCGCGG CGAGGCGGCCCTGCAGCGGCTGCGCAGCCAGACCGCCTTCGAGGACGCCTCCGCGCGCGCCGAGGGCTACGTGGACCAGG CCGTCGAGCTGACCCAGGAGGCGCTGGGCACCGTCGCGTCGCAGACCCGCGCGGTCGGTGAGCGCGCCGCCAAGCTGGTG GGCATCGAGCTGCCGGGCAAGGCCGAGGCCGCCGGCAAGAAGGCCCAGAAGGCCATCGCCAAGGCCCCCGCCAAGAAGGC GCCGGCCAAGAAGGTCACCCAGAAGTAG
Upstream 100 bases:
>100_bases CATGACGAACGACCGACGCTCCGCGCGGCCCCAGTTGCGAAGGAGACGTTTGCACCTAATTTCCCGACCAGACACCTGAC AAACACACAGAGCAGAAACC
Downstream 100 bases:
>100_bases CACCGCAGTTCCCACGACGCTCGACTCCGAGTTGCCTTCGGGTGACTCGGAGTCGACGTTGCGGACGCCGCCCGCCTACG CTTGAGGCGTGAACCACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Adhesin [H]
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKGTTMAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRARLTKFQEDLPEQFTELRDKF TTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLV GIELPGKAEAAGKKAQKAIAKAPAKKAPAKKVTQK
Sequences:
>Translated_195_residues MKGTTMAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRARLTKFQEDLPEQFTELRDKF TTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLV GIELPGKAEAAGKKAQKAIAKAPAKKAPAKKVTQK >Mature_195_residues MKGTTMAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRARLTKFQEDLPEQFTELRDKF TTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAFEDASARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLV GIELPGKAEAAGKKAQKAIAKAPAKKAPAKKVTQK
Specific function: Required for extrapulmonary dissemination. Mediates adherence to epithelial cells by binding to sulfated glycoconjugates present at the surface of these cells; binds heparin, dextran sulfate, fucoidan and chondroitin sulfate. Promotes hemagglutination of
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell surface [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae hbhA [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020340 - ProDom: PD082580 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21291; Mature: 21291
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGTTMAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTKFQEDLPEQFTELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDASARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPGKAEAAGKKAQKAIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KAPAKKAPAKKVTQK HCCHHCCCHHHHCCC >Mature Secondary Structure MKGTTMAENPNIDDLRAPLLAALGAADLALATVNDLIANLRERAEETRAETRTRVEERRA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTKFQEDLPEQFTELRDKFTTEELRKAAEGYLEAATNRYNELVERGEAALQRLRSQTAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDASARAEGYVDQAVELTQEALGTVASQTRAVGERAAKLVGIELPGKAEAAGKKAQKAIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KAPAKKAPAKKVTQK HCCHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972; 11449276 [H]