Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410067

Identifier: 41410067

GI number: 41410067

Start: 4429197

End: 4429460

Strand: Direct

Name: 41410067

Synonym: MAP3969

Alternate gene names: NA

Gene position: 4429197-4429460 (Clockwise)

Preceding gene: 41410066

Following gene: 41410068

Centisome position: 91.71

GC content: 65.91

Gene sequence:

>264_bases
ATGCTGGTCTTGCAGATCGCCGTCCTGGTCACGGCGATCTACGCCTTCGTGCATGCCGCGCTGCAGCGCCCCGACGCCTA
TACCGCCGCCGACAAGCTGACCAAGCCGGTGTGGTTGCTGATCCTGGGCGGGGCGGTGGCTTTGACGTCGGTGCTGGGCT
ACGTGTTCGGCGTGCTGGGCATGGCGATCGCCGCCTGTGCGGCCGGGGTGTATCTGGTCGATGTGCGGCCCAAACTCCTG
GAAATACAGGGCAAGTCGCGCTAG

Upstream 100 bases:

>100_bases
CACGACGCTCGACTCCGAGTTGCCTTCGGGTGACTCGGAGTCGACGTTGCGGACGCCGCCCGCCTACGCTTGAGGCGTGA
ACCACCTCGTGGGTACCGTC

Downstream 100 bases:

>100_bases
CGGGATGCGGGTCCCGCTGGCCGCGCCGGCCGCGCTGCTGCTGGCGCTGTGCTGGCCGATAGCGCCCGCCGCCGCGCCGG
ACCCCGGCGCCGGGACGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MLVLQIAVLVTAIYAFVHAALQRPDAYTAADKLTKPVWLLILGGAVALTSVLGYVFGVLGMAIAACAAGVYLVDVRPKLL
EIQGKSR

Sequences:

>Translated_87_residues
MLVLQIAVLVTAIYAFVHAALQRPDAYTAADKLTKPVWLLILGGAVALTSVLGYVFGVLGMAIAACAAGVYLVDVRPKLL
EIQGKSR
>Mature_87_residues
MLVLQIAVLVTAIYAFVHAALQRPDAYTAADKLTKPVWLLILGGAVALTSVLGYVFGVLGMAIAACAAGVYLVDVRPKLL
EIQGKSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv0476 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019662 [H]

Pfam domain/function: PF10724 DUF2516 [H]

EC number: NA

Molecular weight: Translated: 9169; Mature: 9169

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLQIAVLVTAIYAFVHAALQRPDAYTAADKLTKPVWLLILGGAVALTSVLGYVFGVLG
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
MAIAACAAGVYLVDVRPKLLEIQGKSR
HHHHHHHCCCCEEECCHHHHHCCCCCC
>Mature Secondary Structure
MLVLQIAVLVTAIYAFVHAALQRPDAYTAADKLTKPVWLLILGGAVALTSVLGYVFGVLG
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
MAIAACAAGVYLVDVRPKLLEIQGKSR
HHHHHHHCCCCEEECCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]