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The map label for this gene is 41410043

Identifier: 41410043

GI number: 41410043

Start: 4405283

End: 4405969

Strand: Direct

Name: 41410043

Synonym: MAP3945

Alternate gene names: NA

Gene position: 4405283-4405969 (Clockwise)

Preceding gene: 41410041

Following gene: 41410044

Centisome position: 91.21

GC content: 70.6

Gene sequence:

>687_bases
GTGCGTTACGCTCGGCCGGTGGCGCAACTAACATTCCAGCGCGCCCGCACCGAGGAGAAGAAGCGCCAACGTGCGGAGGC
CCTCGTGGAGGCGGCCCGTTCGCTGGCGCTGGAGACGGGCGTCGCGTCGGTCACCCTGACCGCCGTCGCCCGCCGCGCCG
GGATCCACTACTCGGCGGTGCGCCGCTACTTCACCTCGCACAAGGAGGTCCTGCTGCACCTGTCCGCCGAGGGCTGGGTG
CGGTGGTCGAACACGGTGTCGGACAAGCTCGCCCAGCCCGGCGCCGCGACGCCGTCGCGGATCGCCGAGACGCTGGCCGA
CGCCCTGGCCGACGATCCGCTGTTCTGCGACCTGCTGGCCAACCTGCACCTGCACCTGGAACACGAGGTGGATGCCGAAC
GCGTGGTCGAGGTCAAGCGGATCAGCACCGCCGCCACGCTGTCCCTCGCCGACTCCATCCAGCGGGCGCTGCCCGAACTC
GGGCGCTCGGGGTCGCTGGACATCCTGCTGGCCGCCTACTCGCTGGCGGCCACGCTGTGGCAGGTGGCCAACCCCCCGGA
ACGGCTCACCGACGCCTACGCAGAGGAGCCGGAAGTCGTTCCGCCGGAATGGAATCTGGACTTCGCCTCCGCGCTGACCC
GGCTGTTGACCGCCACGTGCATCGGCCTCATCCCGCAATCGGCATGA

Upstream 100 bases:

>100_bases
GATCAGGGCGATGGTCTGCACCCGTCCAGCTTGACGCGTCGCGGCGGGGCTCAGTGGCCCACGACAAATCACGCCACGTG
CGTTATACAAATCACATAAT

Downstream 100 bases:

>100_bases
TCGCAGAAAGGGGGGCGCGCCCATGACGACGACCGAGCCAAGGACCGAGCCGTTGAACAAGCAGGACTCCGCGGGCCGCG
AGGGCGGCGAGACCGCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator TetR; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRYARPVAQLTFQRARTEEKKRQRAEALVEAARSLALETGVASVTLTAVARRAGIHYSAVRRYFTSHKEVLLHLSAEGWV
RWSNTVSDKLAQPGAATPSRIAETLADALADDPLFCDLLANLHLHLEHEVDAERVVEVKRISTAATLSLADSIQRALPEL
GRSGSLDILLAAYSLAATLWQVANPPERLTDAYAEEPEVVPPEWNLDFASALTRLLTATCIGLIPQSA

Sequences:

>Translated_228_residues
MRYARPVAQLTFQRARTEEKKRQRAEALVEAARSLALETGVASVTLTAVARRAGIHYSAVRRYFTSHKEVLLHLSAEGWV
RWSNTVSDKLAQPGAATPSRIAETLADALADDPLFCDLLANLHLHLEHEVDAERVVEVKRISTAATLSLADSIQRALPEL
GRSGSLDILLAAYSLAATLWQVANPPERLTDAYAEEPEVVPPEWNLDFASALTRLLTATCIGLIPQSA
>Mature_228_residues
MRYARPVAQLTFQRARTEEKKRQRAEALVEAARSLALETGVASVTLTAVARRAGIHYSAVRRYFTSHKEVLLHLSAEGWV
RWSNTVSDKLAQPGAATPSRIAETLADALADDPLFCDLLANLHLHLEHEVDAERVVEVKRISTAATLSLADSIQRALPEL
GRSGSLDILLAAYSLAATLWQVANPPERLTDAYAEEPEVVPPEWNLDFASALTRLLTATCIGLIPQSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24944; Mature: 24944

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYARPVAQLTFQRARTEEKKRQRAEALVEAARSLALETGVASVTLTAVARRAGIHYSAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RRYFTSHKEVLLHLSAEGWVRWSNTVSDKLAQPGAATPSRIAETLADALADDPLFCDLLA
HHHHHHHHHHHHEECCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
NLHLHLEHEVDAERVVEVKRISTAATLSLADSIQRALPELGRSGSLDILLAAYSLAATLW
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QVANPPERLTDAYAEEPEVVPPEWNLDFASALTRLLTATCIGLIPQSA
HHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRYARPVAQLTFQRARTEEKKRQRAEALVEAARSLALETGVASVTLTAVARRAGIHYSAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
RRYFTSHKEVLLHLSAEGWVRWSNTVSDKLAQPGAATPSRIAETLADALADDPLFCDLLA
HHHHHHHHHHHHEECCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
NLHLHLEHEVDAERVVEVKRISTAATLSLADSIQRALPELGRSGSLDILLAAYSLAATLW
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QVANPPERLTDAYAEEPEVVPPEWNLDFASALTRLLTATCIGLIPQSA
HHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA