Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41410041

Identifier: 41410041

GI number: 41410041

Start: 4402692

End: 4403486

Strand: Direct

Name: 41410041

Synonym: MAP3943

Alternate gene names: NA

Gene position: 4402692-4403486 (Clockwise)

Preceding gene: 41410040

Following gene: 41410043

Centisome position: 91.16

GC content: 75.97

Gene sequence:

>795_bases
GTGGCGGTGCCGGCGGGATGGGTGCAGCTGCACGTCGTCGACGCCGACGGCTATGCCGCGCTGGCCCGCCGGGCCGCCGC
TGACCCGGCCCTGCAATCCGCCATGGCGGCCGAACTCACCACGCGGGCAATGGCTTTGATCGCCGAGCACGGCGGCGGCC
GCTACCCGGTGGACGGTACGCAGGTGCACGACGCCGCCGCCGCGTTCACCGCCGGGCCGGCGTTTCCGCCGTTGTTCGCC
CAGGCCAACCGCGCCGCGCACGCCTGGCTGTTCGACGAGTCCGGCGCGGGCGGCGGCCAGTGGGCGGTCGATGTGGCCCC
GATGCTCGACGACCCCTCGATCCGGCCGCTGCTGCGCCGGCACAACGTCGCGGTCCCGGCGAAACTGACGGTGCCGCTTA
CCGTTTCGGTGCCTCGGCAGGGCCGGCTCAGCGGGCTGACGCGCTGGGGGCCGTGGCTGAGCCTGGGGTCGGCGGCGCTG
TGCGGGGTGGGTGCGCTGCTGACGCTAGCCGCCGCCCGGCGCCGCGGCAAGGCGCTCAGCGGCCTGGGCGTCGCGGCGCT
GCTGGTCGGCGCGGCCGGATGGGCCGGCCTGGAGGCGGCCGGCCGCTACGTCAACGACGCGCTCAACCACACCACCGGCA
ACGTCCGCCGCATCGCCGAGGTGATGGTCGCGCACGCCGAATCCGGTGTGCACCAATGGCTCGACGCCACGCTGCTGGCC
GGGGCGGCGCTGGCGGGGCTGGGTGTGCTGGTGGCGGTGCTGGGCGGCCTGGCCGGTGCGGCTAGCCGAAGGTGA

Upstream 100 bases:

>100_bases
CTCGGGCAGGCCGCATACGTGCGGGGAATTCAGTAGATTCGCGGCCGTGCGATTCGCGGGCGTCGTGCTGGGGTGGCTGA
TCGCCACGCTGGCCCTGGCG

Downstream 100 bases:

>100_bases
ACGAGAAGACCTGCAGCCCTGGGCTGACGCGCATGTCCAGCTGGTCGCGGTGCGCGGAGTCGTCGGCGACGATCCGGTGC
AGGGTGGGCGCCCCGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MAVPAGWVQLHVVDADGYAALARRAAADPALQSAMAAELTTRAMALIAEHGGGRYPVDGTQVHDAAAAFTAGPAFPPLFA
QANRAAHAWLFDESGAGGGQWAVDVAPMLDDPSIRPLLRRHNVAVPAKLTVPLTVSVPRQGRLSGLTRWGPWLSLGSAAL
CGVGALLTLAAARRRGKALSGLGVAALLVGAAGWAGLEAAGRYVNDALNHTTGNVRRIAEVMVAHAESGVHQWLDATLLA
GAALAGLGVLVAVLGGLAGAASRR

Sequences:

>Translated_264_residues
MAVPAGWVQLHVVDADGYAALARRAAADPALQSAMAAELTTRAMALIAEHGGGRYPVDGTQVHDAAAAFTAGPAFPPLFA
QANRAAHAWLFDESGAGGGQWAVDVAPMLDDPSIRPLLRRHNVAVPAKLTVPLTVSVPRQGRLSGLTRWGPWLSLGSAAL
CGVGALLTLAAARRRGKALSGLGVAALLVGAAGWAGLEAAGRYVNDALNHTTGNVRRIAEVMVAHAESGVHQWLDATLLA
GAALAGLGVLVAVLGGLAGAASRR
>Mature_263_residues
AVPAGWVQLHVVDADGYAALARRAAADPALQSAMAAELTTRAMALIAEHGGGRYPVDGTQVHDAAAAFTAGPAFPPLFAQ
ANRAAHAWLFDESGAGGGQWAVDVAPMLDDPSIRPLLRRHNVAVPAKLTVPLTVSVPRQGRLSGLTRWGPWLSLGSAALC
GVGALLTLAAARRRGKALSGLGVAALLVGAAGWAGLEAAGRYVNDALNHTTGNVRRIAEVMVAHAESGVHQWLDATLLAG
AALAGLGVLVAVLGGLAGAASRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26819; Mature: 26688

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPAGWVQLHVVDADGYAALARRAAADPALQSAMAAELTTRAMALIAEHGGGRYPVDGT
CCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QVHDAAAAFTAGPAFPPLFAQANRAAHAWLFDESGAGGGQWAVDVAPMLDDPSIRPLLRR
HHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHH
HNVAVPAKLTVPLTVSVPRQGRLSGLTRWGPWLSLGSAALCGVGALLTLAAARRRGKALS
CCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCHHH
GLGVAALLVGAAGWAGLEAAGRYVNDALNHTTGNVRRIAEVMVAHAESGVHQWLDATLLA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAALAGLGVLVAVLGGLAGAASRR
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AVPAGWVQLHVVDADGYAALARRAAADPALQSAMAAELTTRAMALIAEHGGGRYPVDGT
CCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QVHDAAAAFTAGPAFPPLFAQANRAAHAWLFDESGAGGGQWAVDVAPMLDDPSIRPLLRR
HHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHH
HNVAVPAKLTVPLTVSVPRQGRLSGLTRWGPWLSLGSAALCGVGALLTLAAARRRGKALS
CCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCHHH
GLGVAALLVGAAGWAGLEAAGRYVNDALNHTTGNVRRIAEVMVAHAESGVHQWLDATLLA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAALAGLGVLVAVLGGLAGAASRR
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA