| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410041
Identifier: 41410041
GI number: 41410041
Start: 4402692
End: 4403486
Strand: Direct
Name: 41410041
Synonym: MAP3943
Alternate gene names: NA
Gene position: 4402692-4403486 (Clockwise)
Preceding gene: 41410040
Following gene: 41410043
Centisome position: 91.16
GC content: 75.97
Gene sequence:
>795_bases GTGGCGGTGCCGGCGGGATGGGTGCAGCTGCACGTCGTCGACGCCGACGGCTATGCCGCGCTGGCCCGCCGGGCCGCCGC TGACCCGGCCCTGCAATCCGCCATGGCGGCCGAACTCACCACGCGGGCAATGGCTTTGATCGCCGAGCACGGCGGCGGCC GCTACCCGGTGGACGGTACGCAGGTGCACGACGCCGCCGCCGCGTTCACCGCCGGGCCGGCGTTTCCGCCGTTGTTCGCC CAGGCCAACCGCGCCGCGCACGCCTGGCTGTTCGACGAGTCCGGCGCGGGCGGCGGCCAGTGGGCGGTCGATGTGGCCCC GATGCTCGACGACCCCTCGATCCGGCCGCTGCTGCGCCGGCACAACGTCGCGGTCCCGGCGAAACTGACGGTGCCGCTTA CCGTTTCGGTGCCTCGGCAGGGCCGGCTCAGCGGGCTGACGCGCTGGGGGCCGTGGCTGAGCCTGGGGTCGGCGGCGCTG TGCGGGGTGGGTGCGCTGCTGACGCTAGCCGCCGCCCGGCGCCGCGGCAAGGCGCTCAGCGGCCTGGGCGTCGCGGCGCT GCTGGTCGGCGCGGCCGGATGGGCCGGCCTGGAGGCGGCCGGCCGCTACGTCAACGACGCGCTCAACCACACCACCGGCA ACGTCCGCCGCATCGCCGAGGTGATGGTCGCGCACGCCGAATCCGGTGTGCACCAATGGCTCGACGCCACGCTGCTGGCC GGGGCGGCGCTGGCGGGGCTGGGTGTGCTGGTGGCGGTGCTGGGCGGCCTGGCCGGTGCGGCTAGCCGAAGGTGA
Upstream 100 bases:
>100_bases CTCGGGCAGGCCGCATACGTGCGGGGAATTCAGTAGATTCGCGGCCGTGCGATTCGCGGGCGTCGTGCTGGGGTGGCTGA TCGCCACGCTGGCCCTGGCG
Downstream 100 bases:
>100_bases ACGAGAAGACCTGCAGCCCTGGGCTGACGCGCATGTCCAGCTGGTCGCGGTGCGCGGAGTCGTCGGCGACGATCCGGTGC AGGGTGGGCGCCCCGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAVPAGWVQLHVVDADGYAALARRAAADPALQSAMAAELTTRAMALIAEHGGGRYPVDGTQVHDAAAAFTAGPAFPPLFA QANRAAHAWLFDESGAGGGQWAVDVAPMLDDPSIRPLLRRHNVAVPAKLTVPLTVSVPRQGRLSGLTRWGPWLSLGSAAL CGVGALLTLAAARRRGKALSGLGVAALLVGAAGWAGLEAAGRYVNDALNHTTGNVRRIAEVMVAHAESGVHQWLDATLLA GAALAGLGVLVAVLGGLAGAASRR
Sequences:
>Translated_264_residues MAVPAGWVQLHVVDADGYAALARRAAADPALQSAMAAELTTRAMALIAEHGGGRYPVDGTQVHDAAAAFTAGPAFPPLFA QANRAAHAWLFDESGAGGGQWAVDVAPMLDDPSIRPLLRRHNVAVPAKLTVPLTVSVPRQGRLSGLTRWGPWLSLGSAAL CGVGALLTLAAARRRGKALSGLGVAALLVGAAGWAGLEAAGRYVNDALNHTTGNVRRIAEVMVAHAESGVHQWLDATLLA GAALAGLGVLVAVLGGLAGAASRR >Mature_263_residues AVPAGWVQLHVVDADGYAALARRAAADPALQSAMAAELTTRAMALIAEHGGGRYPVDGTQVHDAAAAFTAGPAFPPLFAQ ANRAAHAWLFDESGAGGGQWAVDVAPMLDDPSIRPLLRRHNVAVPAKLTVPLTVSVPRQGRLSGLTRWGPWLSLGSAALC GVGALLTLAAARRRGKALSGLGVAALLVGAAGWAGLEAAGRYVNDALNHTTGNVRRIAEVMVAHAESGVHQWLDATLLAG AALAGLGVLVAVLGGLAGAASRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26819; Mature: 26688
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPAGWVQLHVVDADGYAALARRAAADPALQSAMAAELTTRAMALIAEHGGGRYPVDGT CCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QVHDAAAAFTAGPAFPPLFAQANRAAHAWLFDESGAGGGQWAVDVAPMLDDPSIRPLLRR HHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHH HNVAVPAKLTVPLTVSVPRQGRLSGLTRWGPWLSLGSAALCGVGALLTLAAARRRGKALS CCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCHHH GLGVAALLVGAAGWAGLEAAGRYVNDALNHTTGNVRRIAEVMVAHAESGVHQWLDATLLA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GAALAGLGVLVAVLGGLAGAASRR HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AVPAGWVQLHVVDADGYAALARRAAADPALQSAMAAELTTRAMALIAEHGGGRYPVDGT CCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QVHDAAAAFTAGPAFPPLFAQANRAAHAWLFDESGAGGGQWAVDVAPMLDDPSIRPLLRR HHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHH HNVAVPAKLTVPLTVSVPRQGRLSGLTRWGPWLSLGSAALCGVGALLTLAAARRRGKALS CCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCHHH GLGVAALLVGAAGWAGLEAAGRYVNDALNHTTGNVRRIAEVMVAHAESGVHQWLDATLLA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GAALAGLGVLVAVLGGLAGAASRR HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA