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The map label for this gene is 41410044

Identifier: 41410044

GI number: 41410044

Start: 4406022

End: 4406540

Strand: Direct

Name: 41410044

Synonym: MAP3946

Alternate gene names: NA

Gene position: 4406022-4406540 (Clockwise)

Preceding gene: 41410043

Following gene: 41410045

Centisome position: 91.23

GC content: 64.35

Gene sequence:

>519_bases
TTGAACAAGCAGGACTCCGCGGGCCGCGAGGGCGGCGAGACCGCCCGGCAGCGCGCCAGGAAGAAGGGGTTTCTGGGCCG
TTTCTGGCTGGTGCTCACGATCGCGGCCGTCGTCGCGCTGTCGGGGTTCGTCGTCTACCGGTTGCACGGCATCTTCGGTG
TGCACCCCGGGTCGTTCGGCGGCGGCACCTCGGGGGAGGTGCTCGACGAGTTCAACGCCAAGACCATCACGCTTCAGGTC
TGGGGCCCGCCGGGCAGCACGGCCACCATCAACTATCTCGACGAAAACTCCCATCCGCAGCAGGCACTCAACGTGCCCTT
GCCCTGGAGCAAAGTATTGAGTTCAACGAAACCCGGCATCCCGGCAAACCTGGTGGCGCAAGGAGACGGCAGCTGGATCG
CCTGCCAGTTCGTGGTGAACAAGCACGACGGCAGCGGTGACGTCATCAAGACCCCGAATCGCTCGGATCCCAACCAGACC
GTGAACGCGTTCGTCTACTGCCTGGACAAGTCCGCATGA

Upstream 100 bases:

>100_bases
CGGCTGTTGACCGCCACGTGCATCGGCCTCATCCCGCAATCGGCATGATCGCAGAAAGGGGGGCGCGCCCATGACGACGA
CCGAGCCAAGGACCGAGCCG

Downstream 100 bases:

>100_bases
GCGAGCCGGTCGAGGCTGCGCCGCGCGTCGATCAGCCGCTGATCCCGCCGTTCCTGCCGCGGATGATCCATCGGCTGGCC
CTGCCGATCGTCCTGGTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MNKQDSAGREGGETARQRARKKGFLGRFWLVLTIAAVVALSGFVVYRLHGIFGVHPGSFGGGTSGEVLDEFNAKTITLQV
WGPPGSTATINYLDENSHPQQALNVPLPWSKVLSSTKPGIPANLVAQGDGSWIACQFVVNKHDGSGDVIKTPNRSDPNQT
VNAFVYCLDKSA

Sequences:

>Translated_172_residues
MNKQDSAGREGGETARQRARKKGFLGRFWLVLTIAAVVALSGFVVYRLHGIFGVHPGSFGGGTSGEVLDEFNAKTITLQV
WGPPGSTATINYLDENSHPQQALNVPLPWSKVLSSTKPGIPANLVAQGDGSWIACQFVVNKHDGSGDVIKTPNRSDPNQT
VNAFVYCLDKSA
>Mature_172_residues
MNKQDSAGREGGETARQRARKKGFLGRFWLVLTIAAVVALSGFVVYRLHGIFGVHPGSFGGGTSGEVLDEFNAKTITLQV
WGPPGSTATINYLDENSHPQQALNVPLPWSKVLSSTKPGIPANLVAQGDGSWIACQFVVNKHDGSGDVIKTPNRSDPNQT
VNAFVYCLDKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 18395; Mature: 18395

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQDSAGREGGETARQRARKKGFLGRFWLVLTIAAVVALSGFVVYRLHGIFGVHPGSFG
CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGTSGEVLDEFNAKTITLQVWGPPGSTATINYLDENSHPQQALNVPLPWSKVLSSTKPGI
CCCCCHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCCCHHHCCCCCCHHHHHHCCCCCC
PANLVAQGDGSWIACQFVVNKHDGSGDVIKTPNRSDPNQTVNAFVYCLDKSA
CEEEEEECCCCEEEEEEEEECCCCCCCEEECCCCCCCCHHEEEEEEEEECCC
>Mature Secondary Structure
MNKQDSAGREGGETARQRARKKGFLGRFWLVLTIAAVVALSGFVVYRLHGIFGVHPGSFG
CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGTSGEVLDEFNAKTITLQVWGPPGSTATINYLDENSHPQQALNVPLPWSKVLSSTKPGI
CCCCCHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCCCHHHCCCCCCHHHHHHCCCCCC
PANLVAQGDGSWIACQFVVNKHDGSGDVIKTPNRSDPNQTVNAFVYCLDKSA
CEEEEEECCCCEEEEEEEEECCCCCCCEEECCCCCCCCHHEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]