| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mosC [H]
Identifier: 41410029
GI number: 41410029
Start: 4391074
End: 4392312
Strand: Direct
Name: mosC [H]
Synonym: MAP3931
Alternate gene names: 41410029
Gene position: 4391074-4392312 (Clockwise)
Preceding gene: 41410025
Following gene: 41410033
Centisome position: 90.92
GC content: 75.14
Gene sequence:
>1239_bases GTGCCACGCGGCCATCTTACGGAGCCGGTGACGGATTCGTCGCCGCCCGCGAAGGGAACGTTCACCGTCGACATGCTGAG TCGGGCCAAACGCGGTGTCACCGCGGTGTTCGTCGCTCACGGCCTGCTGTTCGCGTCGTGGGCCGCCCACATTCCGCAGG TCAAAGCCGGACTCGGCCTGGACGACGCCGCGCTGGGCACGGCGTTGTTCGGCGCTCCGCTGGGCTCGGTGCTGGCCACG CTGGCCGGCCACTGGGCGCTGCCGCGCTGGGGGAGCCACCGGCTGATCCCGGTCACCGTCGCCGGCTACGCGGCGGCCGG GACGACGGTGGGGCTGGCCCGGTCCGGGCCGGCGCTGTTCGCGGCGCTGGCGTTGTGGGGGATGTTCCAGGGCACGCTGG ACGTCGCGATGAACACGCAGGCCGGCACGGTCGAACGGCGCGCCGGGGCCCCGATGATGGCGCGCTTTCACGGGATGTGG AGCCTGGGCACCCTGGCCGGGGCGCTGATCGGGGCGGCCTGCGTCGGCGCCGGCATCGGCCTGACCGCTCAGCTGACGGT GCTCGGGGCGGTCGTGCTCCTCGTGGTGGTAATGCTGACCCGACGCCTGCTGCCGGACGCGGCCGATTCCGTGGCCGCGC CGCCGGAACCGGCCGCGGGCCGGCGGATGACGCCGGCGGTGGCGATCCTGGCGGCCGTGTCGTTCGCGTCGTTCCTGTGC GAGGGCGCGGCCACCGACTGGTCGGCCACCTACCTGCGCGACGTCGTCGGCGCCGGCCCGAGCGTGGCCGCGGCGAGCTA CGCGGCCTACACCCTGACCATGGTCGTCACCCGGTTCGGCGCCGCCCGGCTGCACGCGCGGCTGCCCAGCCGCCGGTTGC TGCCGGCGCTGGCGGTGCTGGCCGTGGCGGGCATGAGCGTGGCGCTGGCGACCGCCGACGCGGCCGCCGGGGTGCTCGGG TTCGCCGCGCTGGGCGTCGGCGTCGCGCTGCTGGTGCCCACCGCGTTCAGCGCGGCCTACGGCGCCCGCGGCGCCGGATC GGCGATCGCGATCGTGGCCGCCACCGGCTGGCTGGGCTATCTGCTGGGCCCGCCGCTGATCGGCCACCTGTCCGAGTGGG TGGGCCTGTCGGGGGCGCTGGTCACCATCCCGGTGATGATGACGGTCGTCGCCGTCGCCATCCGCTACACCCCGGCCTTC GACACCGCCGACGAATTCCATCGAGCGCCCGCCGGCTGA
Upstream 100 bases:
>100_bases GCCGGATGCACCGGCGGGATGGCGGAGCGCACCAACTCCAGCGCATGCTGGGGGCTGAAACCGGGGTCGGCAGCCGAGGG GCCGATGGTGCGGGGGCGTC
Downstream 100 bases:
>100_bases ATCGGGCTAGCGCAGATCCCACACCTCGAGGGTGGTCCCCTCGGGCACCTCGACGACGTCTTCGGGGATGTCCAGCAGCC CGTTCGCCGACGCCAGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MPRGHLTEPVTDSSPPAKGTFTVDMLSRAKRGVTAVFVAHGLLFASWAAHIPQVKAGLGLDDAALGTALFGAPLGSVLAT LAGHWALPRWGSHRLIPVTVAGYAAAGTTVGLARSGPALFAALALWGMFQGTLDVAMNTQAGTVERRAGAPMMARFHGMW SLGTLAGALIGAACVGAGIGLTAQLTVLGAVVLLVVVMLTRRLLPDAADSVAAPPEPAAGRRMTPAVAILAAVSFASFLC EGAATDWSATYLRDVVGAGPSVAAASYAAYTLTMVVTRFGAARLHARLPSRRLLPALAVLAVAGMSVALATADAAAGVLG FAALGVGVALLVPTAFSAAYGARGAGSAIAIVAATGWLGYLLGPPLIGHLSEWVGLSGALVTIPVMMTVVAVAIRYTPAF DTADEFHRAPAG
Sequences:
>Translated_412_residues MPRGHLTEPVTDSSPPAKGTFTVDMLSRAKRGVTAVFVAHGLLFASWAAHIPQVKAGLGLDDAALGTALFGAPLGSVLAT LAGHWALPRWGSHRLIPVTVAGYAAAGTTVGLARSGPALFAALALWGMFQGTLDVAMNTQAGTVERRAGAPMMARFHGMW SLGTLAGALIGAACVGAGIGLTAQLTVLGAVVLLVVVMLTRRLLPDAADSVAAPPEPAAGRRMTPAVAILAAVSFASFLC EGAATDWSATYLRDVVGAGPSVAAASYAAYTLTMVVTRFGAARLHARLPSRRLLPALAVLAVAGMSVALATADAAAGVLG FAALGVGVALLVPTAFSAAYGARGAGSAIAIVAATGWLGYLLGPPLIGHLSEWVGLSGALVTIPVMMTVVAVAIRYTPAF DTADEFHRAPAG >Mature_411_residues PRGHLTEPVTDSSPPAKGTFTVDMLSRAKRGVTAVFVAHGLLFASWAAHIPQVKAGLGLDDAALGTALFGAPLGSVLATL AGHWALPRWGSHRLIPVTVAGYAAAGTTVGLARSGPALFAALALWGMFQGTLDVAMNTQAGTVERRAGAPMMARFHGMWS LGTLAGALIGAACVGAGIGLTAQLTVLGAVVLLVVVMLTRRLLPDAADSVAAPPEPAAGRRMTPAVAILAAVSFASFLCE GAATDWSATYLRDVVGAGPSVAAASYAAYTLTMVVTRFGAARLHARLPSRRLLPALAVLAVAGMSVALATADAAAGVLGF AALGVGVALLVPTAFSAAYGARGAGSAIAIVAATGWLGYLLGPPLIGHLSEWVGLSGALVTIPVMMTVVAVAIRYTPAFD TADEFHRAPAG
Specific function: May be a membrane transport protein that could either transport a precursor for rhizopine biosynthesis into bacteroids or the finished product from the bacteroids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787068, Length=369, Percent_Identity=30.0813008130081, Blast_Score=130, Evalue=1e-31,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41469; Mature: 41338
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGHLTEPVTDSSPPAKGTFTVDMLSRAKRGVTAVFVAHGLLFASWAAHIPQVKAGLGL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCC DDAALGTALFGAPLGSVLATLAGHWALPRWGSHRLIPVTVAGYAAAGTTVGLARSGPALF CHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHCCCHHCCCCCCHHHH AALALWGMFQGTLDVAMNTQAGTVERRAGAPMMARFHGMWSLGTLAGALIGAACVGAGIG HHHHHHHHHHHHHHHEECCCCCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCC LTAQLTVLGAVVLLVVVMLTRRLLPDAADSVAAPPEPAAGRRMTPAVAILAAVSFASFLC HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH EGAATDWSATYLRDVVGAGPSVAAASYAAYTLTMVVTRFGAARLHARLPSRRLLPALAVL HCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AVAGMSVALATADAAAGVLGFAALGVGVALLVPTAFSAAYGARGAGSAIAIVAATGWLGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH LLGPPLIGHLSEWVGLSGALVTIPVMMTVVAVAIRYTPAFDTADEFHRAPAG HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC >Mature Secondary Structure PRGHLTEPVTDSSPPAKGTFTVDMLSRAKRGVTAVFVAHGLLFASWAAHIPQVKAGLGL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCC DDAALGTALFGAPLGSVLATLAGHWALPRWGSHRLIPVTVAGYAAAGTTVGLARSGPALF CHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHCCCHHCCCCCCHHHH AALALWGMFQGTLDVAMNTQAGTVERRAGAPMMARFHGMWSLGTLAGALIGAACVGAGIG HHHHHHHHHHHHHHHEECCCCCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCC LTAQLTVLGAVVLLVVVMLTRRLLPDAADSVAAPPEPAAGRRMTPAVAILAAVSFASFLC HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH EGAATDWSATYLRDVVGAGPSVAAASYAAYTLTMVVTRFGAARLHARLPSRRLLPALAVL HCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AVAGMSVALATADAAAGVLGFAALGVGVALLVPTAFSAAYGARGAGSAIAIVAATGWLGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH LLGPPLIGHLSEWVGLSGALVTIPVMMTVVAVAIRYTPAFDTADEFHRAPAG HHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8349559; 7551036 [H]