Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410033

Identifier: 41410033

GI number: 41410033

Start: 4395002

End: 4395727

Strand: Direct

Name: 41410033

Synonym: MAP3935

Alternate gene names: NA

Gene position: 4395002-4395727 (Clockwise)

Preceding gene: 41410029

Following gene: 41410034

Centisome position: 91.0

GC content: 70.52

Gene sequence:

>726_bases
ATGAGGTCCAGCCTGCCAGTTAGCATCGCCAAGGTGGAGGCCTCCGAGGACGTGCGGGTGCGGCGGCTGCTGGACGCCCA
GGACAAGGCGGCGCAGCTGTTCGACGAGATCGAGCGGCGCGGCATGATCCGCCCGGGAGTGGCCGAACGGCAGCTCTCGG
ACGAGATCCACGACCTGGCCGGGGCGATGTTCGGGGTGCGCCAGCACTGGCACCGGCGGATCGTGCGGGCCGGCCCCAAC
ACCCTGCAGCCGTTCCAGGAACGCCCGCCGGACCGCACGATCGCCGCCGACGACATCGTCTTCCTCGACCTGGGGCCGGT
CTTCGAGGAGTGGGAGGCCGACTTCGGGCGTACCTTCCTGCTCGGCGACGACCCGCACAAGAAGGCCGTTCGCGATGCGC
TGCCGCGGGTGTGGCAGGCCGGGCGGGACTACTTCGCCGGCCACCCCGACGTCACCGGGGCCGAGCTGTTCGACGCCGTC
GTCGCGGTGGCGCGCGCCGAGGGATTCGAGTGGGGCAGCCACATCGCCGGGCATCTGATCGGGGAGTTCGCGCACAAGAA
GATCGCCGGGCCGGGCATCGAGTGGTACATCATGCCCGGATCGGACAAGCCGATGCGCCGCACCGATCCCCGCGGCCGCA
CCTGCCACTGGATCCTGGAGATCCATCTGGTGGACCGCCGGCGCGGTTTCGGCGGCTTCTACGAGCAGCTGCTCGACCTG
CCCTAG

Upstream 100 bases:

>100_bases
CTGGTAGTCGGGCGGTTCGTCGGCCCGCTTGAGCCAGGCGCTGGTCTCCGGCTGGTCTTTCGTGTAGCGGGCGGGCGGAT
AGGGCGGCACGACGAGGGAC

Downstream 100 bases:

>100_bases
TTGCGACCCGACCTGTTCTTGCACTCGGCATGGGCGAGTGCTAAGAATGACTTGGCACTCGCGACCAGTGAGTGCTAGGT
CGGGACGGTGAGGCTCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Methionyl Aminopeptidase; Ferredoxin; Peptidase M; M24 Family Peptidase; AIG2 Family Protein

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MRSSLPVSIAKVEASEDVRVRRLLDAQDKAAQLFDEIERRGMIRPGVAERQLSDEIHDLAGAMFGVRQHWHRRIVRAGPN
TLQPFQERPPDRTIAADDIVFLDLGPVFEEWEADFGRTFLLGDDPHKKAVRDALPRVWQAGRDYFAGHPDVTGAELFDAV
VAVARAEGFEWGSHIAGHLIGEFAHKKIAGPGIEWYIMPGSDKPMRRTDPRGRTCHWILEIHLVDRRRGFGGFYEQLLDL
P

Sequences:

>Translated_241_residues
MRSSLPVSIAKVEASEDVRVRRLLDAQDKAAQLFDEIERRGMIRPGVAERQLSDEIHDLAGAMFGVRQHWHRRIVRAGPN
TLQPFQERPPDRTIAADDIVFLDLGPVFEEWEADFGRTFLLGDDPHKKAVRDALPRVWQAGRDYFAGHPDVTGAELFDAV
VAVARAEGFEWGSHIAGHLIGEFAHKKIAGPGIEWYIMPGSDKPMRRTDPRGRTCHWILEIHLVDRRRGFGGFYEQLLDL
P
>Mature_241_residues
MRSSLPVSIAKVEASEDVRVRRLLDAQDKAAQLFDEIERRGMIRPGVAERQLSDEIHDLAGAMFGVRQHWHRRIVRAGPN
TLQPFQERPPDRTIAADDIVFLDLGPVFEEWEADFGRTFLLGDDPHKKAVRDALPRVWQAGRDYFAGHPDVTGAELFDAV
VAVARAEGFEWGSHIAGHLIGEFAHKKIAGPGIEWYIMPGSDKPMRRTDPRGRTCHWILEIHLVDRRRGFGGFYEQLLDL
P

Specific function: Unknown

COG id: COG0006

COG function: function code E; Xaa-Pro aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27332; Mature: 27332

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSLPVSIAKVEASEDVRVRRLLDAQDKAAQLFDEIERRGMIRPGVAERQLSDEIHDLA
CCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GAMFGVRQHWHRRIVRAGPNTLQPFQERPPDRTIAADDIVFLDLGPVFEEWEADFGRTFL
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEECCCEEEEECCHHHHHHHHHHCCEEE
LGDDPHKKAVRDALPRVWQAGRDYFAGHPDVTGAELFDAVVAVARAEGFEWGSHIAGHLI
ECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GEFAHKKIAGPGIEWYIMPGSDKPMRRTDPRGRTCHWILEIHLVDRRRGFGGFYEQLLDL
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHCC
P
C
>Mature Secondary Structure
MRSSLPVSIAKVEASEDVRVRRLLDAQDKAAQLFDEIERRGMIRPGVAERQLSDEIHDLA
CCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GAMFGVRQHWHRRIVRAGPNTLQPFQERPPDRTIAADDIVFLDLGPVFEEWEADFGRTFL
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEECCCEEEEECCHHHHHHHHHHCCEEE
LGDDPHKKAVRDALPRVWQAGRDYFAGHPDVTGAELFDAVVAVARAEGFEWGSHIAGHLI
ECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GEFAHKKIAGPGIEWYIMPGSDKPMRRTDPRGRTCHWILEIHLVDRRRGFGGFYEQLLDL
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA