| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409764
Identifier: 41409764
GI number: 41409764
Start: 4072628
End: 4073869
Strand: Reverse
Name: 41409764
Synonym: MAP3666c
Alternate gene names: NA
Gene position: 4073869-4072628 (Counterclockwise)
Preceding gene: 41409766
Following gene: 41409763
Centisome position: 84.35
GC content: 68.36
Gene sequence:
>1242_bases ATGTTGCGGTTCGCCGCATGCGGGATCATCGGCCTCGGAGCTGCCCTGCTGATCGCTGCGCTGCTGCTGACGACGTACAC CACCAGCCGGATCACCAAGGTCCCGCTGGACGTCGACGCCACGCTGATCAGTGACGGCACCGGGACCGCCCTGGACTCGG CGTCGCTGTCCACCGACCACGTGGTGGTCAACCAGAACGTGCCGCTGGTGTCCCAGCAGCAGATCAGCGTCGAGTCGCCG GCCAACGCCGACGTCGTCACGCTGCAGGTCGGAAGCTCGTTGCGGCGCACCGACAAGCAGAAGGACACGGGGCTGCTGCT GGCGATCGTCGACACCGTCACGCTCAACCGCAAGACCGCCACGGCCGTCTCCGACGACACCCACACCGGCGGCGCGGTGC AGAAGCCGCGCACCATCAACGACGAGAACCCGCCGACCGCGATCCCGCTGCGCCACGACGGGTTGTCCTACCGGTTCCCG TTCCACACCGAGAAGAAGACGTACCCCTATTTCGACCCGATCGCGCAGAAGCCGTTCGACGTCAACTACGACAGCCAAGA GGACGTCAACGGGCTGACCACCTACAAGTTCACCCAGAACGTCGGCTACAACGCCGACGGCAAGCTGGTGGCCCCGGTGG CCTACCCGTCGCTGTACGCCGACCAGGCGACCGACTCCAAGTTCACCGCCCCGGCGTCGATGTGGGGCATCCAGGGCGGC GACCCGAACGAGCAGATCACCATGACCCGCTTCTACGCGGCGCAGCGCACGTTCTGGGTGGACCCGGTGTCGGGCACCAT CGTCAAGCAGACCGAGCACGCCCACCACTACTTCGCCCGCGATCCGCTCAAGCCGGAGCTCACGCTGGCCGACTACAAGG TCACCTCCAACGAGGACACGGTCGAGTCCCAGGTCAACGCGGCCCGTGACGAGCGCGACCGGCTGGCGCTGTGGTCGCGG GTGCTGCCGATCACCTTCACCGCGGTCGGGCTGATCGCGCTGGTGGGCGGTGGGCTGCTGGCCTCGTTCAGCCTGCGCAG CGAGAGCGCGCTGACCGACCCCGGCCTGGACCGCGGCGACCAGGACTTCTTCGGCCGCAGCGGGCTGGAAGAGCCGGTGT CCGGCGCCGAAGCCGAGACCGAGAAACTGCCCACCCAACGTCCCGATCTGCGCTCCGAGTCCGGTCCCGACGAGCCCACC GAGGCGGGGCCGACCGAGGCCAAGCCGCCCGACCGGGAATAG
Upstream 100 bases:
>100_bases GGGTCAAACGAGTTTGCCCCGGGCCACCTGCTCGGGTCGGGTCGCGGCACAGACACGCAAGGGATCATGAGGAGGGCACA GCGACGTGAACCGAGCAGTC
Downstream 100 bases:
>100_bases CCCGCCGCGTGCGCTGGACCCGGCCCGGGTACGCATTGGTCCTGGCGCTGCTGGTGGTCGGGCCGCTGCTGAGGCCCGGG TATCTGCTGCTGCGGGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MLRFAACGIIGLGAALLIAALLLTTYTTSRITKVPLDVDATLISDGTGTALDSASLSTDHVVVNQNVPLVSQQQISVESP ANADVVTLQVGSSLRRTDKQKDTGLLLAIVDTVTLNRKTATAVSDDTHTGGAVQKPRTINDENPPTAIPLRHDGLSYRFP FHTEKKTYPYFDPIAQKPFDVNYDSQEDVNGLTTYKFTQNVGYNADGKLVAPVAYPSLYADQATDSKFTAPASMWGIQGG DPNEQITMTRFYAAQRTFWVDPVSGTIVKQTEHAHHYFARDPLKPELTLADYKVTSNEDTVESQVNAARDERDRLALWSR VLPITFTAVGLIALVGGGLLASFSLRSESALTDPGLDRGDQDFFGRSGLEEPVSGAEAETEKLPTQRPDLRSESGPDEPT EAGPTEAKPPDRE
Sequences:
>Translated_413_residues MLRFAACGIIGLGAALLIAALLLTTYTTSRITKVPLDVDATLISDGTGTALDSASLSTDHVVVNQNVPLVSQQQISVESP ANADVVTLQVGSSLRRTDKQKDTGLLLAIVDTVTLNRKTATAVSDDTHTGGAVQKPRTINDENPPTAIPLRHDGLSYRFP FHTEKKTYPYFDPIAQKPFDVNYDSQEDVNGLTTYKFTQNVGYNADGKLVAPVAYPSLYADQATDSKFTAPASMWGIQGG DPNEQITMTRFYAAQRTFWVDPVSGTIVKQTEHAHHYFARDPLKPELTLADYKVTSNEDTVESQVNAARDERDRLALWSR VLPITFTAVGLIALVGGGLLASFSLRSESALTDPGLDRGDQDFFGRSGLEEPVSGAEAETEKLPTQRPDLRSESGPDEPT EAGPTEAKPPDRE >Mature_413_residues MLRFAACGIIGLGAALLIAALLLTTYTTSRITKVPLDVDATLISDGTGTALDSASLSTDHVVVNQNVPLVSQQQISVESP ANADVVTLQVGSSLRRTDKQKDTGLLLAIVDTVTLNRKTATAVSDDTHTGGAVQKPRTINDENPPTAIPLRHDGLSYRFP FHTEKKTYPYFDPIAQKPFDVNYDSQEDVNGLTTYKFTQNVGYNADGKLVAPVAYPSLYADQATDSKFTAPASMWGIQGG DPNEQITMTRFYAAQRTFWVDPVSGTIVKQTEHAHHYFARDPLKPELTLADYKVTSNEDTVESQVNAARDERDRLALWSR VLPITFTAVGLIALVGGGLLASFSLRSESALTDPGLDRGDQDFFGRSGLEEPVSGAEAETEKLPTQRPDLRSESGPDEPT EAGPTEAKPPDRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44726; Mature: 44726
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFAACGIIGLGAALLIAALLLTTYTTSRITKVPLDVDATLISDGTGTALDSASLSTDH CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCCCCCCCCCE VVVNQNVPLVSQQQISVESPANADVVTLQVGSSLRRTDKQKDTGLLLAIVDTVTLNRKTA EEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCEEEEEEEHEEECCCEE TAVSDDTHTGGAVQKPRTINDENPPTAIPLRHDGLSYRFPFHTEKKTYPYFDPIAQKPFD EEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCHHHCCCCC VNYDSQEDVNGLTTYKFTQNVGYNADGKLVAPVAYPSLYADQATDSKFTAPASMWGIQGG CCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCHHHCCCCCC DPNEQITMTRFYAAQRTFWVDPVSGTIVKQTEHAHHYFARDPLKPELTLADYKVTSNEDT CCCCCEEEEEEEECCCEEEECCCCCEEEECCCHHHHHHHCCCCCCCEEEEEEEECCCCHH VESQVNAARDERDRLALWSRVLPITFTAVGLIALVGGGLLASFSLRSESALTDPGLDRGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCC QDFFGRSGLEEPVSGAEAETEKLPTQRPDLRSESGPDEPTEAGPTEAKPPDRE HHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRFAACGIIGLGAALLIAALLLTTYTTSRITKVPLDVDATLISDGTGTALDSASLSTDH CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCCCCCCCCCE VVVNQNVPLVSQQQISVESPANADVVTLQVGSSLRRTDKQKDTGLLLAIVDTVTLNRKTA EEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCEEEEEEEHEEECCCEE TAVSDDTHTGGAVQKPRTINDENPPTAIPLRHDGLSYRFPFHTEKKTYPYFDPIAQKPFD EEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCHHHCCCCC VNYDSQEDVNGLTTYKFTQNVGYNADGKLVAPVAYPSLYADQATDSKFTAPASMWGIQGG CCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCCHHHCCCCCC DPNEQITMTRFYAAQRTFWVDPVSGTIVKQTEHAHHYFARDPLKPELTLADYKVTSNEDT CCCCCEEEEEEEECCCEEEECCCCCEEEECCCHHHHHHHCCCCCCCEEEEEEEECCCCHH VESQVNAARDERDRLALWSRVLPITFTAVGLIALVGGGLLASFSLRSESALTDPGLDRGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCC QDFFGRSGLEEPVSGAEAETEKLPTQRPDLRSESGPDEPTEAGPTEAKPPDRE HHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA