Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409743

Identifier: 41409743

GI number: 41409743

Start: 4046903

End: 4048438

Strand: Direct

Name: 41409743

Synonym: MAP3645

Alternate gene names: NA

Gene position: 4046903-4048438 (Clockwise)

Preceding gene: 41409742

Following gene: 41409744

Centisome position: 83.79

GC content: 73.89

Gene sequence:

>1536_bases
GTGAGCGGCGACAATCCGGCCGCCGCGGTCGACGCGCTGGTGGCAGCCGTCAGCCCGGGGCTGGATCCGCCGGCGGTGCA
CCGCAGCGACGCGGTGCTGGTGACCGGGCCGTGGATGGCCGGGGTCACCGCGGTGGCCGCCGCGCTGCAGGAGCGGCTGC
CGCAGCACAAGTTCGTCGAGTCGACGGATCTCGGACCCGGCGAGGTGCCGACCGCGGTGGTGTTCGTGGTGTCGGCGGCC
GCGCACCTGACACCCTCGGACTGCGCGCTGCTGGACGCCGCGACCGAACACACCGACGCGGTGGTGGGGGTGGTATCCAA
GATCGACGTGCACCGCGGCTGGCGTGAGGTGCTCGCCGCCAATCGCGACACCCTGGCCGCGCACGCGCCGCGCTACGCCC
GGGTGCCCTGGGTGGGTGCGGCGGCGCTGCCCGACGTCGGCGAACCCGACGTCGACGACCTGGCCAAGACCGTCGCGGCG
CAACTCGACGACGCCGATCTGGCCCGGCGAAACAGGTTGCGGGCGTGGGAATCCCGCTTGCGGACGGTGGCGCGGCGGTT
CGACCGCGAGGTCGAGGCCCCCGGCCGGCGGGCCCGGGTCGAGGCGCTGCGCGAAGAGCGCAGCACCGCGCTGCAGCAGC
GGCGCCAGGCCAAAACCGAGCGCAGCATCACGCTGCGCGGTCAGATCCAGCAGGCCCGGGTGGCGCTGTCGCACTCCGCG
CGCAACCGGTGCGCGTCGGTGCGCACCGAGCTGCAGGAGCACGCGGCGGGCCTGTCCCGGGGCAAGTTGTCCGGCTTCGA
GGCGCACACCCGCGACCGGCTGGCCGAGGTGGTCGCCGAGGTCAACGACGGCACCGACACGCAACTGGCGGACACCGCGC
AGGCGGTGGGGGTGGCGGTGGACCTGCCGGCCCTCGAGCAGCTGCCGGCGGTGGAGGTCTCGCCGCCGCCGCTGAAATCA
CGCCGACAGGAAACCTGGCTGATGATCCTGTTCGGCGTCGGGTTCGGGCTCGGGGTGGCGCTGACGCTGAGCCGGCTGAT
GAGCGGGCTGGCGTCCCGGCTCAGCCCGGCACTGGCGGTGGCGGCCGCCGTGGTGTGCGTGCTGATCTCGGTGGCGCTCA
CCTTCCTGGTGATCAACATCCGCGGCCTGCTGCGGGACCGGGCGCTGCTGGACCGCTGGGCGGGTGACGCGACGGCGTCG
CTGCGCTCGGTGGTCGAGGAGCTGGTGGCCACCCGGGTGCTGGTGGCCGAGTCGGTGCTGAGCAAGGCGCTGCTGGCCCA
GGACGAGGCCGAGAACGCGGCGGTGTCGGCGTCGGTCAGCGCCATCGACACCGAGCTGCGCGAGCACGCCCTGGCCGCCG
CCCGGGCAGCGGCCGCGCGGGATCGGGAGATGCCGGCGGTCACGGCCGCGCTCGAAGCCGTGCGTGCAGAACTCGGCGAA
CCGGGTATACAACCGGGCGGAAGTCCCGCCGAAGATGCCGGCGGTGCGAAAACCGAAAAACCCGCTTCGAGGAGCGAAGA
TGGCGACCGGCCGTGA

Upstream 100 bases:

>100_bases
GCGCGTGCGGCGCCGACATCGCCCGGGGATCGCTGCGGCTGTGGTCGCAGGCCTGCGCCACGCTGCCCGGCGAACGGCCC
GTCGAACGGGAGGACCCGGC

Downstream 100 bases:

>100_bases
GCTTCTGAATCGTTGTTGTGAGAAGGCTTATACCTGCCCGAGACTTCCCCGACAAGTTCCTCACGATAACCTGTAGTTAA
CGCCACCAAGTCCTTAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MSGDNPAAAVDALVAAVSPGLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVESTDLGPGEVPTAVVFVVSAA
AHLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAANRDTLAAHAPRYARVPWVGAAALPDVGEPDVDDLAKTVAA
QLDDADLARRNRLRAWESRLRTVARRFDREVEAPGRRARVEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSA
RNRCASVRTELQEHAAGLSRGKLSGFEAHTRDRLAEVVAEVNDGTDTQLADTAQAVGVAVDLPALEQLPAVEVSPPPLKS
RRQETWLMILFGVGFGLGVALTLSRLMSGLASRLSPALAVAAAVVCVLISVALTFLVINIRGLLRDRALLDRWAGDATAS
LRSVVEELVATRVLVAESVLSKALLAQDEAENAAVSASVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGE
PGIQPGGSPAEDAGGAKTEKPASRSEDGDRP

Sequences:

>Translated_511_residues
MSGDNPAAAVDALVAAVSPGLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVESTDLGPGEVPTAVVFVVSAA
AHLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAANRDTLAAHAPRYARVPWVGAAALPDVGEPDVDDLAKTVAA
QLDDADLARRNRLRAWESRLRTVARRFDREVEAPGRRARVEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSA
RNRCASVRTELQEHAAGLSRGKLSGFEAHTRDRLAEVVAEVNDGTDTQLADTAQAVGVAVDLPALEQLPAVEVSPPPLKS
RRQETWLMILFGVGFGLGVALTLSRLMSGLASRLSPALAVAAAVVCVLISVALTFLVINIRGLLRDRALLDRWAGDATAS
LRSVVEELVATRVLVAESVLSKALLAQDEAENAAVSASVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGE
PGIQPGGSPAEDAGGAKTEKPASRSEDGDRP
>Mature_510_residues
SGDNPAAAVDALVAAVSPGLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVESTDLGPGEVPTAVVFVVSAAA
HLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAANRDTLAAHAPRYARVPWVGAAALPDVGEPDVDDLAKTVAAQ
LDDADLARRNRLRAWESRLRTVARRFDREVEAPGRRARVEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSAR
NRCASVRTELQEHAAGLSRGKLSGFEAHTRDRLAEVVAEVNDGTDTQLADTAQAVGVAVDLPALEQLPAVEVSPPPLKSR
RQETWLMILFGVGFGLGVALTLSRLMSGLASRLSPALAVAAAVVCVLISVALTFLVINIRGLLRDRALLDRWAGDATASL
RSVVEELVATRVLVAESVLSKALLAQDEAENAAVSASVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGEP
GIQPGGSPAEDAGGAKTEKPASRSEDGDRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53892; Mature: 53760

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDNPAAAVDALVAAVSPGLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVE
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHCCC
STDLGPGEVPTAVVFVVSAAAHLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRDTLAAHAPRYARVPWVGAAALPDVGEPDVDDLAKTVAAQLDDADLARRNRLRAWESRL
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RTVARRFDREVEAPGRRARVEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHH
RNRCASVRTELQEHAAGLSRGKLSGFEAHTRDRLAEVVAEVNDGTDTQLADTAQAVGVAV
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEE
DLPALEQLPAVEVSPPPLKSRRQETWLMILFGVGFGLGVALTLSRLMSGLASRLSPALAV
CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAVVCVLISVALTFLVINIRGLLRDRALLDRWAGDATASLRSVVEELVATRVLVAESVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SKALLAQDEAENAAVSASVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PGIQPGGSPAEDAGGAKTEKPASRSEDGDRP
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGDNPAAAVDALVAAVSPGLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVE
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHCCC
STDLGPGEVPTAVVFVVSAAAHLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRDTLAAHAPRYARVPWVGAAALPDVGEPDVDDLAKTVAAQLDDADLARRNRLRAWESRL
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RTVARRFDREVEAPGRRARVEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHH
RNRCASVRTELQEHAAGLSRGKLSGFEAHTRDRLAEVVAEVNDGTDTQLADTAQAVGVAV
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEE
DLPALEQLPAVEVSPPPLKSRRQETWLMILFGVGFGLGVALTLSRLMSGLASRLSPALAV
CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAVVCVLISVALTFLVINIRGLLRDRALLDRWAGDATASLRSVVEELVATRVLVAESVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SKALLAQDEAENAAVSASVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PGIQPGGSPAEDAGGAKTEKPASRSEDGDRP
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA