Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409710

Identifier: 41409710

GI number: 41409710

Start: 4009825

End: 4010379

Strand: Direct

Name: 41409710

Synonym: MAP3612

Alternate gene names: NA

Gene position: 4009825-4010379 (Clockwise)

Preceding gene: 41409709

Following gene: 41409711

Centisome position: 83.02

GC content: 66.49

Gene sequence:

>555_bases
ATGAGTCCGCGCCGCAAGTTCGCGCCCGGCGAGCGGCCACTGCTCGTCGCGCGCCCGGTCCGGCCGCCGCGAGGATGGCT
GCTGCCGCTCGCCGGCACGGCCGCCGCGCTGCTCATGGTCACGGCGGTCACGCTCTGCGCGCTGATGCTGGTCTCGCACG
AATCCCGGGAGCGGGCGGCGTCGAAGGACCGCGAGGTGCTCAGCTACGTCAGCGGCTTCATGACCCAATTCACCTCCATC
GATCCCTTTCACGCCAACGATTACGTGAATCGGATCCTGGCCCAGGCGACCGGCGACTTCGCCAAGCAATACGAGAAGAA
CGCCAACGAGATCCTGCTCCAGGTCGCCCGCGCCGAACCGGCCACCGGCACCGTCCTGGACGCCGGACTGGAACGGTGGA
ACGACGACGGCAGCGCCAATGTCATGGTGGCCACGGCAATCACCACCAAGTCGCCGGATGAGAAACAGGTGTTGGAGAAC
ACCAACCGTTGGGCGGCAACCGCCACGCAGGAAGGGAACCAGTGGAAGATCAGCAGCCTCCAGCAGGTGATCTGA

Upstream 100 bases:

>100_bases
GCGCCACCGTGCGGGTGAGCTTCGCCAAGGTTGGCGAAAACACTTGGCGGGTCGACGATCTCACCGTCCTGACCAAGCCG
AAACCGCCGGGCGGGGCGAA

Downstream 100 bases:

>100_bases
CCGCCGAGGAGAACCCGGCGGCCGCCGACCAGAATGAGGCGACGGTTGCGGCAGCGGGCGACGATCGGGAAAACGGTGAC
GCGGCAACGGAATCCGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSPRRKFAPGERPLLVARPVRPPRGWLLPLAGTAAALLMVTAVTLCALMLVSHESRERAASKDREVLSYVSGFMTQFTSI
DPFHANDYVNRILAQATGDFAKQYEKNANEILLQVARAEPATGTVLDAGLERWNDDGSANVMVATAITTKSPDEKQVLEN
TNRWAATATQEGNQWKISSLQQVI

Sequences:

>Translated_184_residues
MSPRRKFAPGERPLLVARPVRPPRGWLLPLAGTAAALLMVTAVTLCALMLVSHESRERAASKDREVLSYVSGFMTQFTSI
DPFHANDYVNRILAQATGDFAKQYEKNANEILLQVARAEPATGTVLDAGLERWNDDGSANVMVATAITTKSPDEKQVLEN
TNRWAATATQEGNQWKISSLQQVI
>Mature_183_residues
SPRRKFAPGERPLLVARPVRPPRGWLLPLAGTAAALLMVTAVTLCALMLVSHESRERAASKDREVLSYVSGFMTQFTSID
PFHANDYVNRILAQATGDFAKQYEKNANEILLQVARAEPATGTVLDAGLERWNDDGSANVMVATAITTKSPDEKQVLENT
NRWAATATQEGNQWKISSLQQVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20209; Mature: 20078

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRRKFAPGERPLLVARPVRPPRGWLLPLAGTAAALLMVTAVTLCALMLVSHESRERAA
CCCCCCCCCCCCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
SKDREVLSYVSGFMTQFTSIDPFHANDYVNRILAQATGDFAKQYEKNANEILLQVARAEP
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
ATGTVLDAGLERWNDDGSANVMVATAITTKSPDEKQVLENTNRWAATATQEGNQWKISSL
CCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCEEEECCCCCCCCHHHHH
QQVI
HHCC
>Mature Secondary Structure 
SPRRKFAPGERPLLVARPVRPPRGWLLPLAGTAAALLMVTAVTLCALMLVSHESRERAA
CCCCCCCCCCCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
SKDREVLSYVSGFMTQFTSIDPFHANDYVNRILAQATGDFAKQYEKNANEILLQVARAEP
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
ATGTVLDAGLERWNDDGSANVMVATAITTKSPDEKQVLENTNRWAATATQEGNQWKISSL
CCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCEEEECCCCCCCCHHHHH
QQVI
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA