| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409709
Identifier: 41409709
GI number: 41409709
Start: 4008857
End: 4009828
Strand: Direct
Name: 41409709
Synonym: MAP3611
Alternate gene names: NA
Gene position: 4008857-4009828 (Clockwise)
Preceding gene: 41409708
Following gene: 41409710
Centisome position: 83.0
GC content: 70.47
Gene sequence:
>972_bases GTGACGGTGCTGGTCGAACAGACCGCGACCACGGGCACGCCGGAACCAGTGCGAGAAGCCTTGGCGCCCTGGCACTCTCG CGTCGGCGCCTTCGCCATCGACGTGGCACCGGGCGCCGCCGTCATCGCCACCATGGCGCTGGTGTCCTTCACGGTGCCGG CCCGCGGCGTGTGGTGGTGGGTGGGCGTCTGCATGCTGGGCGTCGTCACGCTGCTGGCACTGGTCAACCGGCTGCTGCTG CCGGTGATCACCGGGTGGAGCCTGGGCCGCGCGCTGGCCGGCATCGCGGTGACCCGCCGCACGGACGCGGCCCCGGGGCC GTGGCGGCTGCTGCTGCGCGACCTGGCGCACCTGCTCGACACCGCGTCGATCGTGGGATGGCTTTGGCCGCTGTGGGATT CACGCCGCCGCACGTTCGCCGACATGCTGGCCGGCACCGAAGTGCGGCGCTTGGCGCCGGAGCAGGTGCCGCCGCACATC AGCCGCTGGGCCGCGGCCGCGGTGCTGGGCGCGGCGGCGGTGTGCCTGGGCGGTGCCGCGATGAGTTACGGCGTGGTGTA CTCCGCGGATCGGGCCGCCGATCAGACCCGCGCGCAGATCGCCACCCAGGGGCCGAAAATCGTGGCCCAGATGCTGACGT ATGACCCGAAGTCGCTGCACGACGACTTCGCCCGGGCCCAGTCGCTGGCCACTGACAGGTATCGGCGCCAGCTCCAGACC CAGCAGGACGTGGTGCAGAAGGGCAACCCGGTGATCAACGAATACTGGGTGACCAATAGCTCGATCGAGTCCGCGAGCCG CGACCGTGCGACCATGTTGCTGTTCATGCAAGGCCGCCGTGGCGCCGCACCCGAGGTGCGCTACATCAGCGCCACCGTGC GGGTGAGCTTCGCCAAGGTTGGCGAAAACACTTGGCGGGTCGACGATCTCACCGTCCTGACCAAGCCGAAACCGCCGGGC GGGGCGAAATGA
Upstream 100 bases:
>100_bases CCAGCGACCAGTCGCAGAACGAATCCGGCTACCGGCTGCGGGTGAAAATGGCCCTCGCCGAAGGGCAGTACAAGATCTCC AAGCTCGACCAGGTGACGAA
Downstream 100 bases:
>100_bases GTCCGCGCCGCAAGTTCGCGCCCGGCGAGCGGCCACTGCTCGTCGCGCGCCCGGTCCGGCCGCCGCGAGGATGGCTGCTG CCGCTCGCCGGCACGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Associated Transmembrane Protein
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTVLVEQTATTGTPEPVREALAPWHSRVGAFAIDVAPGAAVIATMALVSFTVPARGVWWWVGVCMLGVVTLLALVNRLLL PVITGWSLGRALAGIAVTRRTDAAPGPWRLLLRDLAHLLDTASIVGWLWPLWDSRRRTFADMLAGTEVRRLAPEQVPPHI SRWAAAAVLGAAAVCLGGAAMSYGVVYSADRAADQTRAQIATQGPKIVAQMLTYDPKSLHDDFARAQSLATDRYRRQLQT QQDVVQKGNPVINEYWVTNSSIESASRDRATMLLFMQGRRGAAPEVRYISATVRVSFAKVGENTWRVDDLTVLTKPKPPG GAK
Sequences:
>Translated_323_residues MTVLVEQTATTGTPEPVREALAPWHSRVGAFAIDVAPGAAVIATMALVSFTVPARGVWWWVGVCMLGVVTLLALVNRLLL PVITGWSLGRALAGIAVTRRTDAAPGPWRLLLRDLAHLLDTASIVGWLWPLWDSRRRTFADMLAGTEVRRLAPEQVPPHI SRWAAAAVLGAAAVCLGGAAMSYGVVYSADRAADQTRAQIATQGPKIVAQMLTYDPKSLHDDFARAQSLATDRYRRQLQT QQDVVQKGNPVINEYWVTNSSIESASRDRATMLLFMQGRRGAAPEVRYISATVRVSFAKVGENTWRVDDLTVLTKPKPPG GAK >Mature_322_residues TVLVEQTATTGTPEPVREALAPWHSRVGAFAIDVAPGAAVIATMALVSFTVPARGVWWWVGVCMLGVVTLLALVNRLLLP VITGWSLGRALAGIAVTRRTDAAPGPWRLLLRDLAHLLDTASIVGWLWPLWDSRRRTFADMLAGTEVRRLAPEQVPPHIS RWAAAAVLGAAAVCLGGAAMSYGVVYSADRAADQTRAQIATQGPKIVAQMLTYDPKSLHDDFARAQSLATDRYRRQLQTQ QDVVQKGNPVINEYWVTNSSIESASRDRATMLLFMQGRRGAAPEVRYISATVRVSFAKVGENTWRVDDLTVLTKPKPPGG AK
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35085; Mature: 34954
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLVEQTATTGTPEPVREALAPWHSRVGAFAIDVAPGAAVIATMALVSFTVPARGVWWW CEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHH VGVCMLGVVTLLALVNRLLLPVITGWSLGRALAGIAVTRRTDAAPGPWRLLLRDLAHLLD HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TASIVGWLWPLWDSRRRTFADMLAGTEVRRLAPEQVPPHISRWAAAAVLGAAAVCLGGAA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MSYGVVYSADRAADQTRAQIATQGPKIVAQMLTYDPKSLHDDFARAQSLATDRYRRQLQT HHHCCEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QQDVVQKGNPVINEYWVTNSSIESASRDRATMLLFMQGRRGAAPEVRYISATVRVSFAKV HHHHHHCCCCCEEEEEECCCCHHHCCCCHHEEEEEEECCCCCCCCEEEEEHHHEEHHHHH GENTWRVDDLTVLTKPKPPGGAK CCCCEEECCEEEEECCCCCCCCC >Mature Secondary Structure TVLVEQTATTGTPEPVREALAPWHSRVGAFAIDVAPGAAVIATMALVSFTVPARGVWWW EEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHH VGVCMLGVVTLLALVNRLLLPVITGWSLGRALAGIAVTRRTDAAPGPWRLLLRDLAHLLD HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TASIVGWLWPLWDSRRRTFADMLAGTEVRRLAPEQVPPHISRWAAAAVLGAAAVCLGGAA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH MSYGVVYSADRAADQTRAQIATQGPKIVAQMLTYDPKSLHDDFARAQSLATDRYRRQLQT HHHCCEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QQDVVQKGNPVINEYWVTNSSIESASRDRATMLLFMQGRRGAAPEVRYISATVRVSFAKV HHHHHHCCCCCEEEEEECCCCHHHCCCCHHEEEEEEECCCCCCCCEEEEEHHHEEHHHHH GENTWRVDDLTVLTKPKPPGGAK CCCCEEECCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA