| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409711
Identifier: 41409711
GI number: 41409711
Start: 4010346
End: 4011104
Strand: Direct
Name: 41409711
Synonym: MAP3613
Alternate gene names: NA
Gene position: 4010346-4011104 (Clockwise)
Preceding gene: 41409710
Following gene: 41409712
Centisome position: 83.03
GC content: 67.85
Gene sequence:
>759_bases GTGGAAGATCAGCAGCCTCCAGCAGGTGATCTGACCGCCGAGGAGAACCCGGCGGCCGCCGACCAGAATGAGGCGACGGT TGCGGCAGCGGGCGACGATCGGGAAAACGGTGACGCGGCAACGGAATCCGAGGCGGCCGAGACCTCGGACGCCCAACCGG CCGACGGCGCCGAGGACACCCAGTCCGCCGAGACCGTCGCGACCGCCGGTGCCGCGCCGGCCGCCGGTCGCCGCACCAAG CGGCTGGCGGGGAAGGCCTGGGCCGTCGCCGCCATGGTCGCCGCGCTGCTCTTCGTCGGCTCGGCCGGGTTCGCCGGCGC GATGGTGCAGCCCTACCTGGCCGACCGCGCCGTCGCCGCGACGAAACTGAAGGTGGCGCGGACCGCGGCCAACGCGATCA CCACGCTGTGGACCTACACGCCGGAAAACATGGACACCCTGGCCGATCGCGCATCCGCCTACCTCAGCGGCGATTTCGAA GCGCAGTACCGCAAATTCGTCGACGCCATCGTCGCACCGAACAAACAGGCCAAGATCACCAACCACACCGACGTCACCGG CGCGGCCGTCGAATCGCTCGACGACACCAACGCGGTGGTCATCGTCTACACCAACACCACATCCACCAGTCCGCTGACCA AGAACGTGCCGTCGCTGAAATACCTGTCCTACCGGTTGTTCATGAAGCGCGCCAAGAGCCGCTGGCTGGTCACCAGGATG ACGACCATCACCTCGCTGGACCTGACCCCGAAGGTCTGA
Upstream 100 bases:
>100_bases TCATGGTGGCCACGGCAATCACCACCAAGTCGCCGGATGAGAAACAGGTGTTGGAGAACACCAACCGTTGGGCGGCAACC GCCACGCAGGAAGGGAACCA
Downstream 100 bases:
>100_bases CCCGGCGCACCGAAACAGGCTGCAGCCCATGGCCGTTACCTCCCCGGTATCGAAGCGGTGGACGGTGGCGGCGCTGCTGT TGCTGACCTTCGCGACCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MEDQQPPAGDLTAEENPAAADQNEATVAAAGDDRENGDAATESEAAETSDAQPADGAEDTQSAETVATAGAAPAAGRRTK RLAGKAWAVAAMVAALLFVGSAGFAGAMVQPYLADRAVAATKLKVARTAANAITTLWTYTPENMDTLADRASAYLSGDFE AQYRKFVDAIVAPNKQAKITNHTDVTGAAVESLDDTNAVVIVYTNTTSTSPLTKNVPSLKYLSYRLFMKRAKSRWLVTRM TTITSLDLTPKV
Sequences:
>Translated_252_residues MEDQQPPAGDLTAEENPAAADQNEATVAAAGDDRENGDAATESEAAETSDAQPADGAEDTQSAETVATAGAAPAAGRRTK RLAGKAWAVAAMVAALLFVGSAGFAGAMVQPYLADRAVAATKLKVARTAANAITTLWTYTPENMDTLADRASAYLSGDFE AQYRKFVDAIVAPNKQAKITNHTDVTGAAVESLDDTNAVVIVYTNTTSTSPLTKNVPSLKYLSYRLFMKRAKSRWLVTRM TTITSLDLTPKV >Mature_252_residues MEDQQPPAGDLTAEENPAAADQNEATVAAAGDDRENGDAATESEAAETSDAQPADGAEDTQSAETVATAGAAPAAGRRTK RLAGKAWAVAAMVAALLFVGSAGFAGAMVQPYLADRAVAATKLKVARTAANAITTLWTYTPENMDTLADRASAYLSGDFE AQYRKFVDAIVAPNKQAKITNHTDVTGAAVESLDDTNAVVIVYTNTTSTSPLTKNVPSLKYLSYRLFMKRAKSRWLVTRM TTITSLDLTPKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26495; Mature: 26495
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDQQPPAGDLTAEENPAAADQNEATVAAAGDDRENGDAATESEAAETSDAQPADGAEDT CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCHH QSAETVATAGAAPAAGRRTKRLAGKAWAVAAMVAALLFVGSAGFAGAMVQPYLADRAVAA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TKLKVARTAANAITTLWTYTPENMDTLADRASAYLSGDFEAQYRKFVDAIVAPNKQAKIT HHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEC NHTDVTGAAVESLDDTNAVVIVYTNTTSTSPLTKNVPSLKYLSYRLFMKRAKSRWLVTRM CCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEH TTITSLDLTPKV HHHEEECCCCCC >Mature Secondary Structure MEDQQPPAGDLTAEENPAAADQNEATVAAAGDDRENGDAATESEAAETSDAQPADGAEDT CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCHH QSAETVATAGAAPAAGRRTKRLAGKAWAVAAMVAALLFVGSAGFAGAMVQPYLADRAVAA HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TKLKVARTAANAITTLWTYTPENMDTLADRASAYLSGDFEAQYRKFVDAIVAPNKQAKIT HHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEC NHTDVTGAAVESLDDTNAVVIVYTNTTSTSPLTKNVPSLKYLSYRLFMKRAKSRWLVTRM CCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEH TTITSLDLTPKV HHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA