| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409708
Identifier: 41409708
GI number: 41409708
Start: 4008219
End: 4008860
Strand: Direct
Name: 41409708
Synonym: MAP3610
Alternate gene names: NA
Gene position: 4008219-4008860 (Clockwise)
Preceding gene: 41409707
Following gene: 41409709
Centisome position: 82.99
GC content: 69.63
Gene sequence:
>642_bases TTGAGCCCCCAGGACAAGGACGAGGATTCGACGGCACCCGCAAGCACCGACGAGCAGACCGGTTCGCAGGGTGCTCCCGG GGTGGCGGGGGAATCCGCACCCGATGCCGCCGACGACGCCGCCGTTGCGGCCGTTCCGCGCGGCCCCTCCCGGCTGGGGC GCGGGTGGCTGGCCGCCATCGCCGCGGTGCTGGTGCTGTGCGCCGCCGGCATCGGCGCGGGCGGCTACCTGGCGCTGCGC TACCACCACGAAAGCCAGGTGATCGCCCGCAACAACGCCGCCGCGCTGAAGGCGGCGGTGGACTGCGTCGAGGCCACCCA GGCGCCGGACACCAACGCCATGACCGCCAGCGAGCAGAAGATCATCGACTGCGGCACGGACGCTTACCGCTCGCAGGCGC TGCTGTACACCAGCATGCTGGTGCAGGCGTACCAGTCCGCGAACATTCACGTCCAGGTGTCCGACGTGCGGGCCGCGGTC GAGCGCAACAACCCCGACGGTTCGATCGACATCCTGGTCGCGCTGCGGGTCAAGGTGGCCAGCGACCAGTCGCAGAACGA ATCCGGCTACCGGCTGCGGGTGAAAATGGCCCTCGCCGAAGGGCAGTACAAGATCTCCAAGCTCGACCAGGTGACGAAGT GA
Upstream 100 bases:
>100_bases TGAAATACTCCGTCGAGAACTCGACCAGAACAGGAGACGACGGATGGAAGGAGATGCTGGCGCCAGCCGGCTGAACCCCA TCGACACGGACGACGATTCG
Downstream 100 bases:
>100_bases CGGTGCTGGTCGAACAGACCGCGACCACGGGCACGCCGGAACCAGTGCGAGAAGCCTTGGCGCCCTGGCACTCTCGCGTC GGCGCCTTCGCCATCGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Associated Membrane Protein; Conserved MCE Associated Membrane Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSPQDKDEDSTAPASTDEQTGSQGAPGVAGESAPDAADDAAVAAVPRGPSRLGRGWLAAIAAVLVLCAAGIGAGGYLALR YHHESQVIARNNAAALKAAVDCVEATQAPDTNAMTASEQKIIDCGTDAYRSQALLYTSMLVQAYQSANIHVQVSDVRAAV ERNNPDGSIDILVALRVKVASDQSQNESGYRLRVKMALAEGQYKISKLDQVTK
Sequences:
>Translated_213_residues MSPQDKDEDSTAPASTDEQTGSQGAPGVAGESAPDAADDAAVAAVPRGPSRLGRGWLAAIAAVLVLCAAGIGAGGYLALR YHHESQVIARNNAAALKAAVDCVEATQAPDTNAMTASEQKIIDCGTDAYRSQALLYTSMLVQAYQSANIHVQVSDVRAAV ERNNPDGSIDILVALRVKVASDQSQNESGYRLRVKMALAEGQYKISKLDQVTK >Mature_212_residues SPQDKDEDSTAPASTDEQTGSQGAPGVAGESAPDAADDAAVAAVPRGPSRLGRGWLAAIAAVLVLCAAGIGAGGYLALRY HHESQVIARNNAAALKAAVDCVEATQAPDTNAMTASEQKIIDCGTDAYRSQALLYTSMLVQAYQSANIHVQVSDVRAAVE RNNPDGSIDILVALRVKVASDQSQNESGYRLRVKMALAEGQYKISKLDQVTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22227; Mature: 22096
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQDKDEDSTAPASTDEQTGSQGAPGVAGESAPDAADDAAVAAVPRGPSRLGRGWLAAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH AAVLVLCAAGIGAGGYLALRYHHESQVIARNNAAALKAAVDCVEATQAPDTNAMTASEQK HHHHHHHHHCCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE IIDCGTDAYRSQALLYTSMLVQAYQSANIHVQVSDVRAAVERNNPDGSIDILVALRVKVA EEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCEEEEEEEEEEEC SDQSQNESGYRLRVKMALAEGQYKISKLDQVTK CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCC >Mature Secondary Structure SPQDKDEDSTAPASTDEQTGSQGAPGVAGESAPDAADDAAVAAVPRGPSRLGRGWLAAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH AAVLVLCAAGIGAGGYLALRYHHESQVIARNNAAALKAAVDCVEATQAPDTNAMTASEQK HHHHHHHHHCCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE IIDCGTDAYRSQALLYTSMLVQAYQSANIHVQVSDVRAAVERNNPDGSIDILVALRVKVA EEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCEEEEEEEEEEEC SDQSQNESGYRLRVKMALAEGQYKISKLDQVTK CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA