Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409684

Identifier: 41409684

GI number: 41409684

Start: 3983834

End: 3984544

Strand: Reverse

Name: 41409684

Synonym: MAP3586c

Alternate gene names: NA

Gene position: 3984544-3983834 (Counterclockwise)

Preceding gene: 41409694

Following gene: 41409680

Centisome position: 82.5

GC content: 70.46

Gene sequence:

>711_bases
TTGCGTGCGATGGGAGGACGACCCATGTCTCTGGTGGCCGGGCGGGGTCCGCTCAGCAGCGATCCGGCGGGGCGGTTCTC
GCCGCCGATCCCCGCCGAGGTCGTCTACGTCGAACCGCATCCCCGGCGGGTGCAGGCGGTCAAGGACGGGCGTTCGGTGA
TCGACACCGAACGGGCGCTGATGGTGCACCGGCGGGGGCGGCCGCTGAGCTACGTCTTCCCGGCCGACGAGGTCGCCGGC
CTGCCCGGGGAGCCGGAGCCGGAGGCGCCCGGTTTCGTCCACGTCCCCTGGGACGCCGTGGACACCTGGTGGGAGGAGGG
ACGCAAGCTCGTGCACTACCCGCCCAATCCGTATCACCGTGTGGACTGCCGGGGCACCCGCCGGCGGCTGCGGGTGCGCG
TCGGCGGCACCACGCTGGTGGACACCGACCACACGACGATCGTCTTCGAGACCGCGCTGCCGCCCAGGCTGTACGTCGAT
CCCGCGCACGTGCGCACCGATCTGCTGCGCCGCTCGGAGACGACGAGTTACTGCAACTACAAGGGTTTCGCGACGTACTG
GTCGCTGGTCGACGGCGACCGGGTGGTCGACGACGTCGGCTGGTGCTATCCGGATCCGCCGCCGGAAAGCCTGCCCATCA
AGGGTTTTCTGAGTTTCGACGAGACCCGCGTCGAGCTGCTGGCCGAGCTGCCGGTCAGCGCCCGTAGCTAG

Upstream 100 bases:

>100_bases
CGGTCCCGCCATGGGTGAGTTCCCGCCTTCTGCCGTTCGGGCGTCACGCCATCGTGGCGCCGCGTGTCGAGTGTCACGCT
AGCGTGGCCTCGAGTGGGGT

Downstream 100 bases:

>100_bases
GCCGTCCGAGCCCCAGCTCGTGCTGGGCGATCATGTTGCGGAACACCTCCATGGTGCCGCCGTAGATGCCGGCGGGCACG
GCGTGCCGGAAGATGAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MRAMGGRPMSLVAGRGPLSSDPAGRFSPPIPAEVVYVEPHPRRVQAVKDGRSVIDTERALMVHRRGRPLSYVFPADEVAG
LPGEPEPEAPGFVHVPWDAVDTWWEEGRKLVHYPPNPYHRVDCRGTRRRLRVRVGGTTLVDTDHTTIVFETALPPRLYVD
PAHVRTDLLRRSETTSYCNYKGFATYWSLVDGDRVVDDVGWCYPDPPPESLPIKGFLSFDETRVELLAELPVSARS

Sequences:

>Translated_236_residues
MRAMGGRPMSLVAGRGPLSSDPAGRFSPPIPAEVVYVEPHPRRVQAVKDGRSVIDTERALMVHRRGRPLSYVFPADEVAG
LPGEPEPEAPGFVHVPWDAVDTWWEEGRKLVHYPPNPYHRVDCRGTRRRLRVRVGGTTLVDTDHTTIVFETALPPRLYVD
PAHVRTDLLRRSETTSYCNYKGFATYWSLVDGDRVVDDVGWCYPDPPPESLPIKGFLSFDETRVELLAELPVSARS
>Mature_236_residues
MRAMGGRPMSLVAGRGPLSSDPAGRFSPPIPAEVVYVEPHPRRVQAVKDGRSVIDTERALMVHRRGRPLSYVFPADEVAG
LPGEPEPEAPGFVHVPWDAVDTWWEEGRKLVHYPPNPYHRVDCRGTRRRLRVRVGGTTLVDTDHTTIVFETALPPRLYVD
PAHVRTDLLRRSETTSYCNYKGFATYWSLVDGDRVVDDVGWCYPDPPPESLPIKGFLSFDETRVELLAELPVSARS

Specific function: Unknown

COG id: COG2343

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26494; Mature: 26494

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMGGRPMSLVAGRGPLSSDPAGRFSPPIPAEVVYVEPHPRRVQAVKDGRSVIDTERAL
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHH
MVHRRGRPLSYVFPADEVAGLPGEPEPEAPGFVHVPWDAVDTWWEEGRKLVHYPPNPYHR
HHHCCCCCEEEEECHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHCCCEEEECCCCCCEE
VDCRGTRRRLRVRVGGTTLVDTDHTTIVFETALPPRLYVDPAHVRTDLLRRSETTSYCNY
ECCCCCCEEEEEEECCEEEEECCCEEEEEECCCCCEEEECHHHHHHHHHHHCCCCCCCCC
KGFATYWSLVDGDRVVDDVGWCYPDPPPESLPIKGFLSFDETRVELLAELPVSARS
CCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRAMGGRPMSLVAGRGPLSSDPAGRFSPPIPAEVVYVEPHPRRVQAVKDGRSVIDTERAL
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHH
MVHRRGRPLSYVFPADEVAGLPGEPEPEAPGFVHVPWDAVDTWWEEGRKLVHYPPNPYHR
HHHCCCCCEEEEECHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHCCCEEEECCCCCCEE
VDCRGTRRRLRVRVGGTTLVDTDHTTIVFETALPPRLYVDPAHVRTDLLRRSETTSYCNY
ECCCCCCEEEEEEECCEEEEECCCEEEEEECCCCCEEEECHHHHHHHHHHHCCCCCCCCC
KGFATYWSLVDGDRVVDDVGWCYPDPPPESLPIKGFLSFDETRVELLAELPVSARS
CCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA