| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409680
Identifier: 41409680
GI number: 41409680
Start: 3980239
End: 3980712
Strand: Reverse
Name: 41409680
Synonym: MAP3582c
Alternate gene names: NA
Gene position: 3980712-3980239 (Counterclockwise)
Preceding gene: 41409684
Following gene: 41409679
Centisome position: 82.42
GC content: 69.62
Gene sequence:
>474_bases TTGGGCATCGTCACCACCAGCTCGGAGACCGCGTTCACCCAGTCCGCCGAAACGGTGTACGACTTCGTCACCAATCCGCA GAACTGGACCAAGACCTATCCCGGCAGCGCCCACATCGGCAAGCGGCCCGAGCTTCCGCTGCGGGTGGGCGACACCTGGG AGGAGGCCGGCCCCGACGGCGACCGGATCTTCAGCTGGCAGCTGGCCGCCGCGGTGCGCCCGTCGCTGTTCGTGTTCACC TCGATCGGCCGGCTGGGCCACGACCGCGACGGCAACGGCGGCCTGCCGGGCCGCATCACGGTCTGCTACCGGTTCACCCG CCCCGGCCACGACATCACGCTGTTCTCCCGCACCATGACGATCGAGGCGGACAAGGACGCCCCGCTGCCCGATCAGCTGT TCGTGCAGGCCAACCCGGCCAGGATCGACGCCTACCATGAGGCCGTCGCGCGGGAGCTCGCCGCGCTCGATTGA
Upstream 100 bases:
>100_bases GCTCAGCGTGACACTTTGCGTAAGATTTGTAAAGCTTGGCTAACAACACTGCGGGGCGGCGTAGCGGCCGGGCGGCGGAA CGCACAGGGAGGCAATACAA
Downstream 100 bases:
>100_bases CACCGGCACCCGCGGTGCATGACACTTTGTCGATGTTTTGTAAAGCGGAAGGTTTGCCGAAGGCATGAGCGGATGATCCC CGAGCCACTGGTCAACGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MGIVTTSSETAFTQSAETVYDFVTNPQNWTKTYPGSAHIGKRPELPLRVGDTWEEAGPDGDRIFSWQLAAAVRPSLFVFT SIGRLGHDRDGNGGLPGRITVCYRFTRPGHDITLFSRTMTIEADKDAPLPDQLFVQANPARIDAYHEAVARELAALD
Sequences:
>Translated_157_residues MGIVTTSSETAFTQSAETVYDFVTNPQNWTKTYPGSAHIGKRPELPLRVGDTWEEAGPDGDRIFSWQLAAAVRPSLFVFT SIGRLGHDRDGNGGLPGRITVCYRFTRPGHDITLFSRTMTIEADKDAPLPDQLFVQANPARIDAYHEAVARELAALD >Mature_156_residues GIVTTSSETAFTQSAETVYDFVTNPQNWTKTYPGSAHIGKRPELPLRVGDTWEEAGPDGDRIFSWQLAAAVRPSLFVFTS IGRLGHDRDGNGGLPGRITVCYRFTRPGHDITLFSRTMTIEADKDAPLPDQLFVQANPARIDAYHEAVARELAALD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17293; Mature: 17162
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIVTTSSETAFTQSAETVYDFVTNPQNWTKTYPGSAHIGKRPELPLRVGDTWEEAGPDG CCEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCEEECCCHHHCCCCC DRIFSWQLAAAVRPSLFVFTSIGRLGHDRDGNGGLPGRITVCYRFTRPGHDITLFSRTMT CEEEEEEEHHHCCCCEEEEEHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEE IEADKDAPLPDQLFVQANPARIDAYHEAVARELAALD EECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GIVTTSSETAFTQSAETVYDFVTNPQNWTKTYPGSAHIGKRPELPLRVGDTWEEAGPDG CEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCEEECCCHHHCCCCC DRIFSWQLAAAVRPSLFVFTSIGRLGHDRDGNGGLPGRITVCYRFTRPGHDITLFSRTMT CEEEEEEEHHHCCCCEEEEEHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEE IEADKDAPLPDQLFVQANPARIDAYHEAVARELAALD EECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA