| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409461
Identifier: 41409461
GI number: 41409461
Start: 3735965
End: 3736840
Strand: Reverse
Name: 41409461
Synonym: MAP3363c
Alternate gene names: NA
Gene position: 3736840-3735965 (Counterclockwise)
Preceding gene: 41409462
Following gene: 41409460
Centisome position: 77.37
GC content: 69.86
Gene sequence:
>876_bases GTGCGGATTCGAGTACGACGAGGCCAAGGGCTGGCCGGAGGACGGCATCGCCCCGGGCACCCGCTGGGACGACATCCCGG AGGACTGGAGCTGCCCGGACTGCGGCGCGGCGAAAAGCGACTTCGAGATGGTGGAAGTGGCGCGGCCCTGATCGGGCTGA AACCCGATGCCCAAACCCGATATTGTCGCGGCTGTGAAGCGGATGCCGTACGCCGAGGCGTCGCGCGCCCTGCTGCGCGA CTCGGTGCTGGATGCGATGCGGGATCTGCTGGTGACCCGGGACTGGTCGGCCATCACGCTGTCCGACGTGGCCCGGGCCG CCGGCATCAGCCGTCAGACCATCTACAACGAGTTCGGCTCCCGGCAAGGCCTGGCGCAGGGGTACGCGCTGCGCCTAGCC GACCGCCTGGTCGACACCATCCACGAGGCCCTGGACGCCCACGTCGGCAACATCTACGAGTCGTTCCTGGACGCCTTCCG CAGGTTCTTCGCCGACGCGGCGGCCGACCCGCTGGTGACCTCGCTGCGCACCGGCGTCGCCAAGCCCGACCTGTTGCAGC TGATCACCACCGACAGCGCGGTCATCATCACCCGCGCGTCGGCGCGGCTGGCCTCGGCGCTGACGCACACCTGGGTGTCC ACCACCGACGAGGACGCCGGGGTGCTGGCCCGCGCCATCGTGCGGCTGGCGCTGAGCTACGTGTCGATGCCGCCCGAGGC CGACCACGACGTGGCCGCCGATCTGGCCCGGTTGATGACGCCGTTCGCCGAGCGGCACGGCGTCGTCAACGTCGGGTGAG CGTTCCCTGGCCGCGGCGGGGCGCCGACCCGCGACTACAGTGGCGCAAGAACATACCTAAGCTAATTACCCAGTGA
Upstream 100 bases:
>100_bases GTGCTGCCCCGATTGCGCGGTGCGCGAGAAGGTCGATTTCGAAAACCTGATTGGACAGGAGTGAACCGATGAGCGACTAC AGGCTGTTCGTCTGCGTGCA
Downstream 100 bases:
>100_bases TCCCCGGACGGCAGGAACAGGAAGAGAACCCATGACGACGACCGAAAACGCGCTCACCCCCGACGTTCGCAACGGCATCG AGTTCAAGGTCGCCGATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRIRVRRGQGLAGGRHRPGHPLGRHPGGLELPGLRRGEKRLRDGGSGAALIGLKPDAQTRYCRGCEADAVRRGVARPAAR LGAGCDAGSAGDPGLVGHHAVRRGPGRRHQPSDHLQRVRLPARPGAGVRAAPSRPPGRHHPRGPGRPRRQHLRVVPGRLP QVLRRRGGRPAGDLAAHRRRQARPVAADHHRQRGHHHPRVGAAGLGADAHLGVHHRRGRRGAGPRHRAAGAELRVDAARG RPRRGRRSGPVDDAVRRAARRRQRRVSVPWPRRGADPRLQWRKNIPKLITQ
Sequences:
>Translated_291_residues MRIRVRRGQGLAGGRHRPGHPLGRHPGGLELPGLRRGEKRLRDGGSGAALIGLKPDAQTRYCRGCEADAVRRGVARPAAR LGAGCDAGSAGDPGLVGHHAVRRGPGRRHQPSDHLQRVRLPARPGAGVRAAPSRPPGRHHPRGPGRPRRQHLRVVPGRLP QVLRRRGGRPAGDLAAHRRRQARPVAADHHRQRGHHHPRVGAAGLGADAHLGVHHRRGRRGAGPRHRAAGAELRVDAARG RPRRGRRSGPVDDAVRRAARRRQRRVSVPWPRRGADPRLQWRKNIPKLITQ >Mature_291_residues MRIRVRRGQGLAGGRHRPGHPLGRHPGGLELPGLRRGEKRLRDGGSGAALIGLKPDAQTRYCRGCEADAVRRGVARPAAR LGAGCDAGSAGDPGLVGHHAVRRGPGRRHQPSDHLQRVRLPARPGAGVRAAPSRPPGRHHPRGPGRPRRQHLRVVPGRLP QVLRRRGGRPAGDLAAHRRRQARPVAADHHRQRGHHHPRVGAAGLGADAHLGVHHRRGRRGAGPRHRAAGAELRVDAARG RPRRGRRSGPVDDAVRRAARRRQRRVSVPWPRRGADPRLQWRKNIPKLITQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31816; Mature: 31816
Theoretical pI: Translated: 12.82; Mature: 12.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRVRRGQGLAGGRHRPGHPLGRHPGGLELPGLRRGEKRLRDGGSGAALIGLKPDAQTR CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHH YCRGCEADAVRRGVARPAARLGAGCDAGSAGDPGLVGHHAVRRGPGRRHQPSDHLQRVRL HHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCC PARPGAGVRAAPSRPPGRHHPRGPGRPRRQHLRVVPGRLPQVLRRRGGRPAGDLAAHRRR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH QARPVAADHHRQRGHHHPRVGAAGLGADAHLGVHHRRGRRGAGPRHRAAGAELRVDAARG HCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCEEEECCCC RPRRGRRSGPVDDAVRRAARRRQRRVSVPWPRRGADPRLQWRKNIPKLITQ CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHCC >Mature Secondary Structure MRIRVRRGQGLAGGRHRPGHPLGRHPGGLELPGLRRGEKRLRDGGSGAALIGLKPDAQTR CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCHH YCRGCEADAVRRGVARPAARLGAGCDAGSAGDPGLVGHHAVRRGPGRRHQPSDHLQRVRL HHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHCC PARPGAGVRAAPSRPPGRHHPRGPGRPRRQHLRVVPGRLPQVLRRRGGRPAGDLAAHRRR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH QARPVAADHHRQRGHHHPRVGAAGLGADAHLGVHHRRGRRGAGPRHRAAGAELRVDAARG HCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCCEEEECCCC RPRRGRRSGPVDDAVRRAARRRQRRVSVPWPRRGADPRLQWRKNIPKLITQ CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA