| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is sahH
Identifier: 41409460
GI number: 41409460
Start: 3734443
End: 3735933
Strand: Reverse
Name: sahH
Synonym: MAP3362c
Alternate gene names: 41409460
Gene position: 3735933-3734443 (Counterclockwise)
Preceding gene: 41409461
Following gene: 41409459
Centisome position: 77.35
GC content: 66.73
Gene sequence:
>1491_bases ATGACGACGACCGAAAACGCGCTCACCCCCGACGTTCGCAACGGCATCGAGTTCAAGGTCGCCGATCTGTCGCTGGCCGA CTACGGGCGCCGCGACATCGAGCTCTCGGAGCAGGAGATGCCCGGTCTGATGTCGCTGCGCCGGGAGTACCACGACGTGC AGCCGCTCAAGGGCGCGCGCATCTCCGGCTCGCTGCACATGACCGTGCAGACCGCGGTGCTGATCGAGACGCTGGTGGCG CTGGGCGCCGAGGTGCGCTGGGCGTCCTGCAACATCTTCTCCACCCAGGACCACGCCGCCGCGGCGGTCGTCGTCGGCCC GCACGGCACCCCCGAGGAGCCCCGGGGCGTGCCGGTGTTCGCGTGGAAGGGCGAGACGCTCGAGGAGTACTGGTGGGCCG CCGAGCAGGCGCTGACCTGGCCTCCGCTCGCGGACGGGACAGAGGCGCCGGCCAACATGATCCTCGACGACGGCGGCGAC GCCACCATGCTGGTGCTGCGCGGCGCCCAGTACGAGAAGGCCGGCGTGGTGCCGCCCGACGACGAGGACGACTCCGCCGA GCACCGGGTGTTCCTCAACCTGCTGCGCGCGCGCTTCGAGACCGACAAGACCAAGTGGACCAAGATCTCCGAGTCGATCA AGGGCGTCACCGAGGAGACCACCACCGGGGTGCTGCGGCTGTACCAGTTCGCCGCGGCCGGTGATCTGGCGTTCCCGGCG ATCAACGTCAACGACTCGGTCACCAAGAGCAAGTTCGACAACAAGTACGGCTGCCGGCACTCGCTGATCGACGGCATCAA CCGCGGCACCGACGTGCTGATCGGCGGCAAGAACGTGCTGGTCTGCGGCTACGGCGACGTCGGCAAGGGCAGCGTGGAGT CGCTGGCCGGTCAGGGCGCCCGGGTGACCGTCACCGAGATCGACCCGATCAACGCGCTGCAGGCGCTGATGGAGGGCTAC AACGTCAAGCGGGTGGAGGACGTCATCGGCGAGGCCGACATCGTCATCACCGCTACCGGCAACAAGGACATCATCACCCT CGAGCACATGAAGGCGATGAAGGACAAGGCCATCCTGGGCAATATCGGCCACTTCGACAACGAGATCCAGATCGCCCGGC TGGAGAAGTCCGGCGCCATCAAGACCAACATCCGCCCGCAGGTGGACCTGTGGACCTTCCCGGACACCGGCAAGTCGATC ATCGTGCTCTCCGAGGGCCGGCTGCTGAACCTGGGCAACGCCACCGGGCACCCGTCGTTCGTGATGAGCAACAGCTTCTC CAACCAGGTGATCGCCCAGATCGAGCTGTGGACCAAGAACGACGAATACGACAACGAGGTCTACCGGCTGCCCAAGCACC TCGACGAGAAGGTGGCCCGCATCCACGTGGAGGCCCTGGGCGGCGAGCTGACCAAGCTCACCAAGGAGCAGGCCGAGTAC ATCGGCGTCGACGTCGACGGCCCGTACAAGGCCGACCACTACCGCTACTGA
Upstream 100 bases:
>100_bases TGGCCGCGGCGGGGCGCCGACCCGCGACTACAGTGGCGCAAGAACATACCTAAGCTAATTACCCAGTGATCCCCGGACGG CAGGAACAGGAAGAGAACCC
Downstream 100 bases:
>100_bases GCGCGCTGCCGGGCGCCGGCGGCCACAGCGCCGGCGGCCCGGGCGTGAACTTAGATTCACGTTCGGCGCCGAGCGTGAAG ATAACTTCACGCTCGGCGGC
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MTTTENALTPDVRNGIEFKVADLSLADYGRRDIELSEQEMPGLMSLRREYHDVQPLKGARISGSLHMTVQTAVLIETLVA LGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPRGVPVFAWKGETLEEYWWAAEQALTWPPLADGTEAPANMILDDGGD ATMLVLRGAQYEKAGVVPPDDEDDSAEHRVFLNLLRARFETDKTKWTKISESIKGVTEETTTGVLRLYQFAAAGDLAFPA INVNDSVTKSKFDNKYGCRHSLIDGINRGTDVLIGGKNVLVCGYGDVGKGSVESLAGQGARVTVTEIDPINALQALMEGY NVKRVEDVIGEADIVITATGNKDIITLEHMKAMKDKAILGNIGHFDNEIQIARLEKSGAIKTNIRPQVDLWTFPDTGKSI IVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGELTKLTKEQAEY IGVDVDGPYKADHYRY
Sequences:
>Translated_496_residues MTTTENALTPDVRNGIEFKVADLSLADYGRRDIELSEQEMPGLMSLRREYHDVQPLKGARISGSLHMTVQTAVLIETLVA LGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPRGVPVFAWKGETLEEYWWAAEQALTWPPLADGTEAPANMILDDGGD ATMLVLRGAQYEKAGVVPPDDEDDSAEHRVFLNLLRARFETDKTKWTKISESIKGVTEETTTGVLRLYQFAAAGDLAFPA INVNDSVTKSKFDNKYGCRHSLIDGINRGTDVLIGGKNVLVCGYGDVGKGSVESLAGQGARVTVTEIDPINALQALMEGY NVKRVEDVIGEADIVITATGNKDIITLEHMKAMKDKAILGNIGHFDNEIQIARLEKSGAIKTNIRPQVDLWTFPDTGKSI IVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGELTKLTKEQAEY IGVDVDGPYKADHYRY >Mature_495_residues TTTENALTPDVRNGIEFKVADLSLADYGRRDIELSEQEMPGLMSLRREYHDVQPLKGARISGSLHMTVQTAVLIETLVAL GAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPRGVPVFAWKGETLEEYWWAAEQALTWPPLADGTEAPANMILDDGGDA TMLVLRGAQYEKAGVVPPDDEDDSAEHRVFLNLLRARFETDKTKWTKISESIKGVTEETTTGVLRLYQFAAAGDLAFPAI NVNDSVTKSKFDNKYGCRHSLIDGINRGTDVLIGGKNVLVCGYGDVGKGSVESLAGQGARVTVTEIDPINALQALMEGYN VKRVEDVIGEADIVITATGNKDIITLEHMKAMKDKAILGNIGHFDNEIQIARLEKSGAIKTNIRPQVDLWTFPDTGKSII VLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGELTKLTKEQAEYI GVDVDGPYKADHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family
Homologues:
Organism=Homo sapiens, GI9951915, Length=481, Percent_Identity=54.2619542619543, Blast_Score=494, Evalue=1e-140, Organism=Homo sapiens, GI239937451, Length=457, Percent_Identity=54.9234135667396, Blast_Score=472, Evalue=1e-133, Organism=Homo sapiens, GI195539337, Length=484, Percent_Identity=44.6280991735537, Blast_Score=420, Evalue=1e-117, Organism=Homo sapiens, GI24308043, Length=484, Percent_Identity=44.6280991735537, Blast_Score=420, Evalue=1e-117, Organism=Homo sapiens, GI298286489, Length=484, Percent_Identity=44.6280991735537, Blast_Score=420, Evalue=1e-117, Organism=Homo sapiens, GI195539349, Length=484, Percent_Identity=44.6280991735537, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI21361647, Length=480, Percent_Identity=43.9583333333333, Blast_Score=404, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17506425, Length=482, Percent_Identity=55.1867219917012, Blast_Score=503, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6320882, Length=493, Percent_Identity=52.9411764705882, Blast_Score=478, Evalue=1e-136, Organism=Drosophila melanogaster, GI24642172, Length=479, Percent_Identity=56.9937369519833, Blast_Score=508, Evalue=1e-144, Organism=Drosophila melanogaster, GI24656245, Length=473, Percent_Identity=45.0317124735729, Blast_Score=413, Evalue=1e-115, Organism=Drosophila melanogaster, GI45553387, Length=485, Percent_Identity=45.1546391752577, Blast_Score=410, Evalue=1e-115, Organism=Drosophila melanogaster, GI45553385, Length=484, Percent_Identity=45.0413223140496, Blast_Score=407, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SAHH_MYCPA (Q73UK6)
Other databases:
- EMBL: AE016958 - RefSeq: NP_962296.1 - ProteinModelPortal: Q73UK6 - SMR: Q73UK6 - EnsemblBacteria: EBMYCT00000039059 - GeneID: 2719309 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP3362c - NMPDR: fig|262316.1.peg.3362 - GeneTree: EBGT00050000016060 - HOGENOM: HBG352029 - OMA: VITHDHM - ProtClustDB: PRK05476 - BRENDA: 3.3.1.1 - GO: GO:0005737 - GO: GO:0005488 - HAMAP: MF_00563 - InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 - PANTHER: PTHR23420 - PIRSF: PIRSF001109 - TIGRFAMs: TIGR00936
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD
EC number: =3.3.1.1
Molecular weight: Translated: 54436; Mature: 54305
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00738 ADOHCYASE_1; PS00739 ADOHCYASE_2
Important sites: BINDING 68-68 BINDING 157-157 BINDING 219-219 BINDING 249-249 BINDING 253-253 BINDING 254-254 BINDING 306-306 BINDING 341-341 BINDING 410-410
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTENALTPDVRNGIEFKVADLSLADYGRRDIELSEQEMPGLMSLRREYHDVQPLKGAR CCCCCCCCCCHHHCCCEEEEEEEEHHHCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCE ISGSLHMTVQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPRGVPVF ECCEEEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEE AWKGETLEEYWWAAEQALTWPPLADGTEAPANMILDDGGDATMLVLRGAQYEKAGVVPPD EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCC DEDDSAEHRVFLNLLRARFETDKTKWTKISESIKGVTEETTTGVLRLYQFAAAGDLAFPA CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCE INVNDSVTKSKFDNKYGCRHSLIDGINRGTDVLIGGKNVLVCGYGDVGKGSVESLAGQGA ECCCCCHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCHHHHHCCCCC RVTVTEIDPINALQALMEGYNVKRVEDVIGEADIVITATGNKDIITLEHMKAMKDKAILG EEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHCC NIGHFDNEIQIARLEKSGAIKTNIRPQVDLWTFPDTGKSIIVLSEGRLLNLGNATGHPSF CCCCCCCCEEEEEEECCCCEEECCCCCEEEEECCCCCCEEEEEECCCEEECCCCCCCCCE VMSNSFSNQVIAQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGELTKLTKEQAEY EEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHEEEHHHHCCHHHHHHHHHHHE IGVDVDGPYKADHYRY EEEECCCCCCCCCCCC >Mature Secondary Structure TTTENALTPDVRNGIEFKVADLSLADYGRRDIELSEQEMPGLMSLRREYHDVQPLKGAR CCCCCCCCCHHHCCCEEEEEEEEHHHCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCE ISGSLHMTVQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPRGVPVF ECCEEEEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEE AWKGETLEEYWWAAEQALTWPPLADGTEAPANMILDDGGDATMLVLRGAQYEKAGVVPPD EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCC DEDDSAEHRVFLNLLRARFETDKTKWTKISESIKGVTEETTTGVLRLYQFAAAGDLAFPA CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCE INVNDSVTKSKFDNKYGCRHSLIDGINRGTDVLIGGKNVLVCGYGDVGKGSVESLAGQGA ECCCCCHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCHHHHHCCCCC RVTVTEIDPINALQALMEGYNVKRVEDVIGEADIVITATGNKDIITLEHMKAMKDKAILG EEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHCC NIGHFDNEIQIARLEKSGAIKTNIRPQVDLWTFPDTGKSIIVLSEGRLLNLGNATGHPSF CCCCCCCCEEEEEEECCCCEEECCCCCEEEEECCCCCCEEEEEECCCEEECCCCCCCCCE VMSNSFSNQVIAQIELWTKNDEYDNEVYRLPKHLDEKVARIHVEALGGELTKLTKEQAEY EEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHEEEHHHHCCHHHHHHHHHHHE IGVDVDGPYKADHYRY EEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA