| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is gutB [H]
Identifier: 41409424
GI number: 41409424
Start: 3694824
End: 3695771
Strand: Reverse
Name: gutB [H]
Synonym: MAP3326c
Alternate gene names: 41409424
Gene position: 3695771-3694824 (Counterclockwise)
Preceding gene: 41409425
Following gene: 41409422
Centisome position: 76.52
GC content: 68.57
Gene sequence:
>948_bases GTGGGCCCGCGCGACGTCCTGGTGCGGATGCGTGCCTGCGGCATCTGCGGCTCCGACGCGTTCTACATCAGCATCGGCGG CGTCCCGCCGCGGCAGGGACACACCCCGCTGGGGCACGAACCGGCCGGCGAGGTCGTCGAGGTCGGCGCCGAGGTGACCG GGCTGGCCGTCGGTGACCACGTCGTCATCAACCCGATGGCCGCGCCCAGCGGCATCATCGGCAACGGCGGCGCCAGCGGG GCGCTCGCCGACTACCTGCTGATCGAAAACGCCGTCCGCGGAACAAGTCTCGAGGTCATTCCGGACCACATCCCGTGGGA GGTGGCGGCGCTCAACGAACCGATGGCCGTCGCGCGCCACGGCGTCAACCGCTGTCAACCCCGACCCACGGACAAGGTCG TCGTCTTCGGCGCCGGCCCGATCGGGCTGGGCGCCACGCTGGCCTTCAAATCCCTCGGCGTGCAGCACATCGTGGTCATC GATCTGATTCCCGGGCGCCTGGACAAGGCAGTGCGGATCGGCGCCGACGCGGTCGTCAACTCCGCCGAAGAAGACGTGGC GGCGCGCCTGGTCGAACTGCACGGCTCGGGCGAGAGCATGTTCCCCGGCAAGGCCGGCACCGACATCTACCTCGACGCCG CCGGCGCGCCAGCCGTCGTCAGCACCGCGCTGGCCGCCGCCAAGAAGGGCGCCACGTTGGGAATCGTTGGCGTGCACAAG GAACCGGTGCCCGTCGACCTGATCAACGTGATGAGCAACGAGATCACCATCGTCGGGAGCATGGGTTATCCGGACGAAAT CTTCGAAGTGACCGGCGATCTGGTGAGGAACTGGGAGAAGTACGCGCTGATCGTCAGCCACACCATTCCGTTCGACCGCG TCGGCGAGGCGCTCGAACTGGCCCGTACTCCCGGCGCCGCCGACAAGGTCGTCGTCACCTTCTGCTGA
Upstream 100 bases:
>100_bases ACCTCGACACCTTCGACATCGAACTGGAAGGCACGCCGTGAAAGCATCCGTGGTCACCGGCCCGCGCCGGGTCGAGGTCG TCGACGTCGAGCGCCCCGAC
Downstream 100 bases:
>100_bases CCGGCCTACGAACGGGCGTTGCTAGGGGCCGGTGTATCCCGGCGGGTTGACGCCGTCCACCCAAAAGTCCACGCCCAGTT GGGATCCCGGCACGCAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MGPRDVLVRMRACGICGSDAFYISIGGVPPRQGHTPLGHEPAGEVVEVGAEVTGLAVGDHVVINPMAAPSGIIGNGGASG ALADYLLIENAVRGTSLEVIPDHIPWEVAALNEPMAVARHGVNRCQPRPTDKVVVFGAGPIGLGATLAFKSLGVQHIVVI DLIPGRLDKAVRIGADAVVNSAEEDVAARLVELHGSGESMFPGKAGTDIYLDAAGAPAVVSTALAAAKKGATLGIVGVHK EPVPVDLINVMSNEITIVGSMGYPDEIFEVTGDLVRNWEKYALIVSHTIPFDRVGEALELARTPGAADKVVVTFC
Sequences:
>Translated_315_residues MGPRDVLVRMRACGICGSDAFYISIGGVPPRQGHTPLGHEPAGEVVEVGAEVTGLAVGDHVVINPMAAPSGIIGNGGASG ALADYLLIENAVRGTSLEVIPDHIPWEVAALNEPMAVARHGVNRCQPRPTDKVVVFGAGPIGLGATLAFKSLGVQHIVVI DLIPGRLDKAVRIGADAVVNSAEEDVAARLVELHGSGESMFPGKAGTDIYLDAAGAPAVVSTALAAAKKGATLGIVGVHK EPVPVDLINVMSNEITIVGSMGYPDEIFEVTGDLVRNWEKYALIVSHTIPFDRVGEALELARTPGAADKVVVTFC >Mature_314_residues GPRDVLVRMRACGICGSDAFYISIGGVPPRQGHTPLGHEPAGEVVEVGAEVTGLAVGDHVVINPMAAPSGIIGNGGASGA LADYLLIENAVRGTSLEVIPDHIPWEVAALNEPMAVARHGVNRCQPRPTDKVVVFGAGPIGLGATLAFKSLGVQHIVVID LIPGRLDKAVRIGADAVVNSAEEDVAARLVELHGSGESMFPGKAGTDIYLDAAGAPAVVSTALAAAKKGATLGIVGVHKE PVPVDLINVMSNEITIVGSMGYPDEIFEVTGDLVRNWEKYALIVSHTIPFDRVGEALELARTPGAADKVVVTFC
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=319, Percent_Identity=31.3479623824451, Blast_Score=115, Evalue=7e-26, Organism=Escherichia coli, GI1788073, Length=317, Percent_Identity=29.3375394321767, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1790045, Length=336, Percent_Identity=28.2738095238095, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1787863, Length=329, Percent_Identity=27.0516717325228, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI226510992, Length=316, Percent_Identity=28.1645569620253, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1788075, Length=340, Percent_Identity=24.7058823529412, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI87082125, Length=345, Percent_Identity=27.2463768115942, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1790718, Length=333, Percent_Identity=27.3273273273273, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788407, Length=328, Percent_Identity=26.219512195122, Blast_Score=76, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17562876, Length=280, Percent_Identity=30, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17562878, Length=281, Percent_Identity=28.8256227758007, Blast_Score=101, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6323099, Length=324, Percent_Identity=27.7777777777778, Blast_Score=106, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6322619, Length=320, Percent_Identity=27.8125, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6319955, Length=320, Percent_Identity=27.8125, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6319257, Length=316, Percent_Identity=27.5316455696203, Blast_Score=102, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6319258, Length=307, Percent_Identity=27.3615635179153, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI17737897, Length=324, Percent_Identity=30.2469135802469, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI17137530, Length=333, Percent_Identity=28.8288288288288, Blast_Score=102, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 32546; Mature: 32415
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPRDVLVRMRACGICGSDAFYISIGGVPPRQGHTPLGHEPAGEVVEVGAEVTGLAVGDH CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCE VVINPMAAPSGIIGNGGASGALADYLLIENAVRGTSLEVIPDHIPWEVAALNEPMAVARH EEEECCCCCCCEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCHHHHHC GVNRCQPRPTDKVVVFGAGPIGLGATLAFKSLGVQHIVVIDLIPGRLDKAVRIGADAVVN CHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHCCHHHHHC SAEEDVAARLVELHGSGESMFPGKAGTDIYLDAAGAPAVVSTALAAAKKGATLGIVGVHK CHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCC EPVPVDLINVMSNEITIVGSMGYPDEIFEVTGDLVRNWEKYALIVSHTIPFDRVGEALEL CCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH ARTPGAADKVVVTFC HCCCCCCCEEEEEEC >Mature Secondary Structure GPRDVLVRMRACGICGSDAFYISIGGVPPRQGHTPLGHEPAGEVVEVGAEVTGLAVGDH CHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEECCE VVINPMAAPSGIIGNGGASGALADYLLIENAVRGTSLEVIPDHIPWEVAALNEPMAVARH EEEECCCCCCCEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCHHHHHC GVNRCQPRPTDKVVVFGAGPIGLGATLAFKSLGVQHIVVIDLIPGRLDKAVRIGADAVVN CHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCEEEEEEEECCCCCCHHHHCCHHHHHC SAEEDVAARLVELHGSGESMFPGKAGTDIYLDAAGAPAVVSTALAAAKKGATLGIVGVHK CHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCC EPVPVDLINVMSNEITIVGSMGYPDEIFEVTGDLVRNWEKYALIVSHTIPFDRVGEALEL CCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHH ARTPGAADKVVVTFC HCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1460002; 9384377; 8195086 [H]