Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409362

Identifier: 41409362

GI number: 41409362

Start: 3625071

End: 3625808

Strand: Reverse

Name: 41409362

Synonym: MAP3264c

Alternate gene names: NA

Gene position: 3625808-3625071 (Counterclockwise)

Preceding gene: 41409364

Following gene: 41409361

Centisome position: 75.07

GC content: 67.75

Gene sequence:

>738_bases
TTGCCGCCAGACGGCTCCGGGGGTGATGTGATGCGCGAGGCCAGCACCACGATCGTCACTCAGCTGGTGGAGCTGGTGAC
CAGTTTGGAGCGGGAGAACAGCGACACCGCGGCCGGGCTGTACGAACTCATCGACAACGGCGTCCACCACGTCACCGGCT
CCCAGTACGCGGGGATCACCCTGGCCGAGAAGAGCAAATCGGTCAACAGCGTGGCGGCCACGCATCGCTACCCGATGGTG
CTGGACGCCATCCAGAACAAGTACGGCGAGGGGCCGTGCCTGGCCGCGGCCTGGGAACACCACGTCATGCACATCGCCGA
CCTGGCCGCCGAACAGCGCTGGCAGCGCTACCGGCGGCACGCGCTCGAGCAGACCCCGATCCGCTCCATCCTGTCGTTCG
AGCTGTTCGTCGACCGCACCAGCATGGCCGCCCTCAACTTCTATGCCGACCCGCCGCACGCGTTCACCGAGGAGTCGGTC
GAGCTCGGCACCGTCTACGCCACCCACATCGCCCTGGCCTGGTCGATGATGCGCCGCCAGGACCAGTTCCGCAGCGCCCT
GGCCTCCCGCGACATCATCGGGCAGGCCAAGGGCGTGATCATGGAGCGCTTCGACCTCGACGCGGTGGAAGCCTTCGAGC
TGCTCACCCGGCTCTCGCAGCAGTCCAACACCCGGGTGGTCGACATCGCGGCCGCACTCATCGACAGCGAGCACCCGCTC
AAGCAGCGCCGGCGCTAG

Upstream 100 bases:

>100_bases
TCCGGCCTTGCGCTTCGTTGTCTGGCTCATAGACTTCTGGGGTGGGTGTTGGCAGCCACGAAAATGTCAATGCCTCCCGT
GATGCCGGCAGGGAAGGGCC

Downstream 100 bases:

>100_bases
CCCATCGCCACCGGCGCCGGCCGGTGCTGTGCGATCAGCCGCTCGCCCAGCTCGTAGTCGTCGTCGGCGTTGTGGGTCAG
CACCCCGACGACGGGCGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Response Regulator Receiver/ANTAR Domain-Containing Protein; Two-Component System Response Regulator; Response Regulator Receiver And ANTAR Domain Protein; GAF Sensor Protein; ANTAR Domain Protein; Two Component System Response Regulator; Transcriptional Regulator; Antar Domain-Containing Protein; ANTAR/GAF Domain-Containing Protein; Response Regulator; Transcription Antitermination Regulator; PAS/PAC Sensor Protein; Antar Domain Protein

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPPDGSGGDVMREASTTIVTQLVELVTSLERENSDTAAGLYELIDNGVHHVTGSQYAGITLAEKSKSVNSVAATHRYPMV
LDAIQNKYGEGPCLAAAWEHHVMHIADLAAEQRWQRYRRHALEQTPIRSILSFELFVDRTSMAALNFYADPPHAFTEESV
ELGTVYATHIALAWSMMRRQDQFRSALASRDIIGQAKGVIMERFDLDAVEAFELLTRLSQQSNTRVVDIAAALIDSEHPL
KQRRR

Sequences:

>Translated_245_residues
MPPDGSGGDVMREASTTIVTQLVELVTSLERENSDTAAGLYELIDNGVHHVTGSQYAGITLAEKSKSVNSVAATHRYPMV
LDAIQNKYGEGPCLAAAWEHHVMHIADLAAEQRWQRYRRHALEQTPIRSILSFELFVDRTSMAALNFYADPPHAFTEESV
ELGTVYATHIALAWSMMRRQDQFRSALASRDIIGQAKGVIMERFDLDAVEAFELLTRLSQQSNTRVVDIAAALIDSEHPL
KQRRR
>Mature_244_residues
PPDGSGGDVMREASTTIVTQLVELVTSLERENSDTAAGLYELIDNGVHHVTGSQYAGITLAEKSKSVNSVAATHRYPMVL
DAIQNKYGEGPCLAAAWEHHVMHIADLAAEQRWQRYRRHALEQTPIRSILSFELFVDRTSMAALNFYADPPHAFTEESVE
LGTVYATHIALAWSMMRRQDQFRSALASRDIIGQAKGVIMERFDLDAVEAFELLTRLSQQSNTRVVDIAAALIDSEHPLK
QRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27363; Mature: 27232

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50921 ANTAR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPDGSGGDVMREASTTIVTQLVELVTSLERENSDTAAGLYELIDNGVHHVTGSQYAGIT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEE
LAEKSKSVNSVAATHRYPMVLDAIQNKYGEGPCLAAAWEHHVMHIADLAAEQRWQRYRRH
EHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEQTPIRSILSFELFVDRTSMAALNFYADPPHAFTEESVELGTVYATHIALAWSMMRRQ
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DQFRSALASRDIIGQAKGVIMERFDLDAVEAFELLTRLSQQSNTRVVDIAAALIDSEHPL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCH
KQRRR
HHCCC
>Mature Secondary Structure 
PPDGSGGDVMREASTTIVTQLVELVTSLERENSDTAAGLYELIDNGVHHVTGSQYAGIT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCEE
LAEKSKSVNSVAATHRYPMVLDAIQNKYGEGPCLAAAWEHHVMHIADLAAEQRWQRYRRH
EHHHHCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEQTPIRSILSFELFVDRTSMAALNFYADPPHAFTEESVELGTVYATHIALAWSMMRRQ
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DQFRSALASRDIIGQAKGVIMERFDLDAVEAFELLTRLSQQSNTRVVDIAAALIDSEHPL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCH
KQRRR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA