Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409355

Identifier: 41409355

GI number: 41409355

Start: 3616723

End: 3617355

Strand: Reverse

Name: 41409355

Synonym: MAP3257c

Alternate gene names: NA

Gene position: 3617355-3616723 (Counterclockwise)

Preceding gene: 41409359

Following gene: 41409354

Centisome position: 74.9

GC content: 67.61

Gene sequence:

>633_bases
GTGGCTCGGGTAGCCGCAACCAGAGCGCGCAACAGCCCTGCGCGCCGAACCAGAGCAGATGGGAGGGACAGCATGGCACC
GACCGCCATCAAGTCGCCCACCGATGTGGTCGACTTTCTGGTCAGCCAGCACCAGCAGATCAAGGCGATGTTCGCCAACA
CGTTGGCGGCGTCCGGAAAGGCGCGCGAGGAGGCCTTCATCGAACTGCGGCGCCTGCTTGCCGTGCACGAGACCGCCGAA
GAGGAGATCGTGCATCCGCGCGCCAAGCGCAAGATCGCCGGCGGGGCAGGTGTGGTCGAGGAACGCCTGCACGAAGAGCA
CGAGGCCAAGACCGCGCTGCAGAAGCTGGAAAAGCTCGACGTCGACAGCGAGGAGTTCACCCGCGAGCTCACCAAGCTGC
GGGACGCGGTGATCGACCACGCCGAGCACGAGGAGCACGACGAGTTCGCCAAGCTGGGCCAGGAATTGAGCGGCGACGAG
CTGGAACGGATGGGCCGCGCCGCCAAACTGGCCGAAGCGATCGCGCCCACCCGGCCGCACGCCGGAGTGGAATCGCAACT
GGCCAACCTGGCCGCCGGCCCGTTCGCCGCGATGCTCGACCGAGCCCGCGACGTCATCGTCGGCAAGGGCTGA

Upstream 100 bases:

>100_bases
ACCACACCGGGACCCAACTCCCGCGCGCAACTTTTGCCTCCCGCCCTGTTTTTCCAGGGCATACCCCGCCTGGCCACCGC
CACACCCGTTTGACCCCCGG

Downstream 100 bases:

>100_bases
CGGCCATCCCAGGCGAGGTACCCCCGCTCGGTGGGGGAGTGGGGGCACCTCGCCGCCCCCTACCATGACCGCGACTTCGA
AGGCCCCGGGTGCCGACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MARVAATRARNSPARRTRADGRDSMAPTAIKSPTDVVDFLVSQHQQIKAMFANTLAASGKAREEAFIELRRLLAVHETAE
EEIVHPRAKRKIAGGAGVVEERLHEEHEAKTALQKLEKLDVDSEEFTRELTKLRDAVIDHAEHEEHDEFAKLGQELSGDE
LERMGRAAKLAEAIAPTRPHAGVESQLANLAAGPFAAMLDRARDVIVGKG

Sequences:

>Translated_210_residues
MARVAATRARNSPARRTRADGRDSMAPTAIKSPTDVVDFLVSQHQQIKAMFANTLAASGKAREEAFIELRRLLAVHETAE
EEIVHPRAKRKIAGGAGVVEERLHEEHEAKTALQKLEKLDVDSEEFTRELTKLRDAVIDHAEHEEHDEFAKLGQELSGDE
LERMGRAAKLAEAIAPTRPHAGVESQLANLAAGPFAAMLDRARDVIVGKG
>Mature_209_residues
ARVAATRARNSPARRTRADGRDSMAPTAIKSPTDVVDFLVSQHQQIKAMFANTLAASGKAREEAFIELRRLLAVHETAEE
EIVHPRAKRKIAGGAGVVEERLHEEHEAKTALQKLEKLDVDSEEFTRELTKLRDAVIDHAEHEEHDEFAKLGQELSGDEL
ERMGRAAKLAEAIAPTRPHAGVESQLANLAAGPFAAMLDRARDVIVGKG

Specific function: Unknown

COG id: COG5592

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23035; Mature: 22904

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVAATRARNSPARRTRADGRDSMAPTAIKSPTDVVDFLVSQHQQIKAMFANTLAASGK
CCCCHHHHHCCCCHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AREEAFIELRRLLAVHETAEEEIVHPRAKRKIAGGAGVVEERLHEEHEAKTALQKLEKLD
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
VDSEEFTRELTKLRDAVIDHAEHEEHDEFAKLGQELSGDELERMGRAAKLAEAIAPTRPH
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
AGVESQLANLAAGPFAAMLDRARDVIVGKG
CCHHHHHHHHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARVAATRARNSPARRTRADGRDSMAPTAIKSPTDVVDFLVSQHQQIKAMFANTLAASGK
CCCHHHHHCCCCHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AREEAFIELRRLLAVHETAEEEIVHPRAKRKIAGGAGVVEERLHEEHEAKTALQKLEKLD
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
VDSEEFTRELTKLRDAVIDHAEHEEHDEFAKLGQELSGDELERMGRAAKLAEAIAPTRPH
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
AGVESQLANLAAGPFAAMLDRARDVIVGKG
CCHHHHHHHHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA