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The map label for this gene is ydfG [C]

Identifier: 41409359

GI number: 41409359

Start: 3620606

End: 3621421

Strand: Reverse

Name: ydfG [C]

Synonym: MAP3261c

Alternate gene names: 41409359

Gene position: 3621421-3620606 (Counterclockwise)

Preceding gene: 41409360

Following gene: 41409355

Centisome position: 74.98

GC content: 72.79

Gene sequence:

>816_bases
GTGGCTGCAGCGGGCTCGTTACAAGAGAGGGCGAATATGTCAAGGACAGTGGTGGTCGGCGCCTCCAGCGGGTTGGGGCG
CTGCATCGGGGTCGGTCTGGCGCAGCGCGGCGACCGGGTGGCGCTGCTGGCCCGGCGCCGGCAGCGCATCGAGGCCGCGG
CCAAGGACGCCGGCCCGGGTGCGGTCGCCATCGAGTGCGACGTCACCGACCAGGCGTCCTGCGCCTCGGCGATCGGCGAG
GCCGCCGACGCGCTGGGCGGGATCGACAACATCGTCTACACCCCCGCGGTGGGCCCGCTGGTGCGCATGGTGGACACCGA
CGCCGACACCTGGCGGCGCATCTTCGACACCAACGTCATCGGCGCGTCGCTGGTCACCGCCGCCGCGGTGCCGCACCTGA
GCGCCTCGGCCGGCAAGGCGGTGTACCTGTCGTCGGACGCCGGCGCGTTCGGGCCGCCGTGGCCGGGGCTGGGCGCCTAC
GGCGTCAGCAAGGCCGCGCTGGAGCGCCTGGTCGAAGCGTGGCGGGCCGAACACCCCGACATCGGCTTCACCTGCCTGAT
CGTCGGGGAGTGCGCGGGCGGCGAGGGCGACGGGCAGACCGGCATGAACCAGGGCTGGGACATGGATCTGGCGATGAAGG
CGGTTCCGCTGTGGTCGTCGCGCGGCTGCATGCCCGGCAAGCTGATGCCGGTGGAGGACCTCATCGACGTGGTGCACACC
ATCCTGCGCACCAACGCCTCGACCTCGATGCCGCTGGTGGTGGCGCGTGGCGCGCCCGCCAGCCAGGCCGCGTTCGCCGA
GGCCAATCAGTCCTGA

Upstream 100 bases:

>100_bases
ACGCCCACACCGCGGTGGTGCTGCGGGCACCCGACGGCGGCTGAGCACCTTGACACGAATCCGCCCGAACGTCACGTAGC
GCGCCGCCGCCCGATACGCT

Downstream 100 bases:

>100_bases
GCCAGTCGTAAGCCAGACCTAGCCCCGGCCGGGGATCCGCTCCCGGGCCAGGTCGGTCAGGAACCGCGCGGCCGACGTGG
GCCGGAAGGCCAGCGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MAAAGSLQERANMSRTVVVGASSGLGRCIGVGLAQRGDRVALLARRRQRIEAAAKDAGPGAVAIECDVTDQASCASAIGE
AADALGGIDNIVYTPAVGPLVRMVDTDADTWRRIFDTNVIGASLVTAAAVPHLSASAGKAVYLSSDAGAFGPPWPGLGAY
GVSKAALERLVEAWRAEHPDIGFTCLIVGECAGGEGDGQTGMNQGWDMDLAMKAVPLWSSRGCMPGKLMPVEDLIDVVHT
ILRTNASTSMPLVVARGAPASQAAFAEANQS

Sequences:

>Translated_271_residues
MAAAGSLQERANMSRTVVVGASSGLGRCIGVGLAQRGDRVALLARRRQRIEAAAKDAGPGAVAIECDVTDQASCASAIGE
AADALGGIDNIVYTPAVGPLVRMVDTDADTWRRIFDTNVIGASLVTAAAVPHLSASAGKAVYLSSDAGAFGPPWPGLGAY
GVSKAALERLVEAWRAEHPDIGFTCLIVGECAGGEGDGQTGMNQGWDMDLAMKAVPLWSSRGCMPGKLMPVEDLIDVVHT
ILRTNASTSMPLVVARGAPASQAAFAEANQS
>Mature_270_residues
AAAGSLQERANMSRTVVVGASSGLGRCIGVGLAQRGDRVALLARRRQRIEAAAKDAGPGAVAIECDVTDQASCASAIGEA
ADALGGIDNIVYTPAVGPLVRMVDTDADTWRRIFDTNVIGASLVTAAAVPHLSASAGKAVYLSSDAGAFGPPWPGLGAYG
VSKAALERLVEAWRAEHPDIGFTCLIVGECAGGEGDGQTGMNQGWDMDLAMKAVPLWSSRGCMPGKLMPVEDLIDVVHTI
LRTNASTSMPLVVARGAPASQAAFAEANQS

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=193, Percent_Identity=30.0518134715026, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI32455239, Length=193, Percent_Identity=25.3886010362694, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI5031765, Length=193, Percent_Identity=25.3886010362694, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI5031737, Length=179, Percent_Identity=32.4022346368715, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4503817, Length=173, Percent_Identity=27.7456647398844, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI33667109, Length=179, Percent_Identity=32.4022346368715, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI126723191, Length=155, Percent_Identity=30.3225806451613, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI23397609, Length=162, Percent_Identity=33.9506172839506, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27774; Mature: 27643

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAGSLQERANMSRTVVVGASSGLGRCIGVGLAQRGDRVALLARRRQRIEAAAKDAGPG
CCCCCCHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
AVAIECDVTDQASCASAIGEAADALGGIDNIVYTPAVGPLVRMVDTDADTWRRIFDTNVI
EEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHCCCH
GASLVTAAAVPHLSASAGKAVYLSSDAGAFGPPWPGLGAYGVSKAALERLVEAWRAEHPD
HHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
IGFTCLIVGECAGGEGDGQTGMNQGWDMDLAMKAVPLWSSRGCMPGKLMPVEDLIDVVHT
CCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHH
ILRTNASTSMPLVVARGAPASQAAFAEANQS
HHHCCCCCCCCEEEECCCCCHHHHHHHCCCC
>Mature Secondary Structure 
AAAGSLQERANMSRTVVVGASSGLGRCIGVGLAQRGDRVALLARRRQRIEAAAKDAGPG
CCCCCHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
AVAIECDVTDQASCASAIGEAADALGGIDNIVYTPAVGPLVRMVDTDADTWRRIFDTNVI
EEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCHHHHHHHHHCCCH
GASLVTAAAVPHLSASAGKAVYLSSDAGAFGPPWPGLGAYGVSKAALERLVEAWRAEHPD
HHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
IGFTCLIVGECAGGEGDGQTGMNQGWDMDLAMKAVPLWSSRGCMPGKLMPVEDLIDVVHT
CCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHH
ILRTNASTSMPLVVARGAPASQAAFAEANQS
HHHCCCCCCCCEEEECCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12950922 [H]