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The map label for this gene is 41409354

Identifier: 41409354

GI number: 41409354

Start: 3615993

End: 3616658

Strand: Reverse

Name: 41409354

Synonym: MAP3256c

Alternate gene names: NA

Gene position: 3616658-3615993 (Counterclockwise)

Preceding gene: 41409355

Following gene: 41409345

Centisome position: 74.88

GC content: 69.82

Gene sequence:

>666_bases
ATGACCGCGACTTCGAAGGCCCCGGGTGCCGACCGCTACCTCCCCGAGCAACGGGACATTGAGGCGCTCAAGCATGCGGC
CGAAACATGCCGCGGCTGTTCACTTTTCGCCGACGCCACCCAGACGGTGTTCGGCAACGGACATCCGGGTGCCCCGATCA
TGCTGGTGGGTGAGCAGCCCGGCGACCAGGAGGACCGCGCCGGTGCACCCTTCGTCGGCCCGGCCGGGCGGCTGCTGGCC
CGGGCGCTGCACGACGCCGGCATCGATCCCGGGCTGACCTATCAGACCAACGCGGTCAAGCATTTCAAGTTCACCCGCAA
GGACGGCAAGCGGCGGATCCATCAGAAGCCGGGCCGCACCGAGATCGTCGCCTGCCGGCCCTGGCTGATCGCCGAGATCG
AGGCGGTGCACCCCCGGGTCATCGTGTGTCTGGGGGCCACCGCCGCACAATCGTTGCTGGGCACCAGCTTTCGGGTCTCC
ACCCAACGCGGCCAACCGCTCAAGCTGCCGGCCTCGCCCGAGGTGATACCCGACGTGGCGCCCGAGCCGGTGCTGGTGGC
GACGGTGCACCCGTCGTCGGTGCTGCGCGACCGCAGCGAACGGCACGACGAGGTCTACCGGTTGTTCGTCGACGACCTGC
GCAGCGCCCGCTCCGCGCTGGGCTGA

Upstream 100 bases:

>100_bases
GACCGAGCCCGCGACGTCATCGTCGGCAAGGGCTGACGGCCATCCCAGGCGAGGTACCCCCGCTCGGTGGGGGAGTGGGG
GCACCTCGCCGCCCCCTACC

Downstream 100 bases:

>100_bases
ACGGCCGCGGTCAGCTTTTCTTGTGCGGCAAGAACTCCTGCATCTTGGTTTTCAGGCCGACCTTGACGAAGCCGGTGCGG
TCCTCGTCGCCGGAGAGCAC

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase; DNA Glycosylase; DNA-Directed DNA Polymerase Protein; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; Uracil DNA Glycosylase Superfamily; DNA Polymerase-Related Protein Bacteriophage-Type; Phage SPO1 DNA Polymerase; Phage Related DNA Polymerase; Uracil-DNA Glycosylase-Like Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; Uracil DNA Glycosylase Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Arginine Biosynthesis Bifunctional Protein ArgJ; Helicase/Glycosylase; Uracil DNA Glycosylase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; N-Terminus Of Bacteriophage-Type DNA Polymerase

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTATSKAPGADRYLPEQRDIEALKHAAETCRGCSLFADATQTVFGNGHPGAPIMLVGEQPGDQEDRAGAPFVGPAGRLLA
RALHDAGIDPGLTYQTNAVKHFKFTRKDGKRRIHQKPGRTEIVACRPWLIAEIEAVHPRVIVCLGATAAQSLLGTSFRVS
TQRGQPLKLPASPEVIPDVAPEPVLVATVHPSSVLRDRSERHDEVYRLFVDDLRSARSALG

Sequences:

>Translated_221_residues
MTATSKAPGADRYLPEQRDIEALKHAAETCRGCSLFADATQTVFGNGHPGAPIMLVGEQPGDQEDRAGAPFVGPAGRLLA
RALHDAGIDPGLTYQTNAVKHFKFTRKDGKRRIHQKPGRTEIVACRPWLIAEIEAVHPRVIVCLGATAAQSLLGTSFRVS
TQRGQPLKLPASPEVIPDVAPEPVLVATVHPSSVLRDRSERHDEVYRLFVDDLRSARSALG
>Mature_220_residues
TATSKAPGADRYLPEQRDIEALKHAAETCRGCSLFADATQTVFGNGHPGAPIMLVGEQPGDQEDRAGAPFVGPAGRLLAR
ALHDAGIDPGLTYQTNAVKHFKFTRKDGKRRIHQKPGRTEIVACRPWLIAEIEAVHPRVIVCLGATAAQSLLGTSFRVST
QRGQPLKLPASPEVIPDVAPEPVLVATVHPSSVLRDRSERHDEVYRLFVDDLRSARSALG

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 23892; Mature: 23761

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATSKAPGADRYLPEQRDIEALKHAAETCRGCSLFADATQTVFGNGHPGAPIMLVGEQP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCC
GDQEDRAGAPFVGPAGRLLARALHDAGIDPGLTYQTNAVKHFKFTRKDGKRRIHQKPGRT
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHEEHHHHHHHHHHCCCCCC
EIVACRPWLIAEIEAVHPRVIVCLGATAAQSLLGTSFRVSTQRGQPLKLPASPEVIPDVA
EEEEECCHHHHHHHHCCCEEEEEECCHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCC
PEPVLVATVHPSSVLRDRSERHDEVYRLFVDDLRSARSALG
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TATSKAPGADRYLPEQRDIEALKHAAETCRGCSLFADATQTVFGNGHPGAPIMLVGEQP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCC
GDQEDRAGAPFVGPAGRLLARALHDAGIDPGLTYQTNAVKHFKFTRKDGKRRIHQKPGRT
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHEEHHHHHHHHHHCCCCCC
EIVACRPWLIAEIEAVHPRVIVCLGATAAQSLLGTSFRVSTQRGQPLKLPASPEVIPDVA
EEEEECCHHHHHHHHCCCEEEEEECCHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCC
PEPVLVATVHPSSVLRDRSERHDEVYRLFVDDLRSARSALG
CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA