| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409345
Identifier: 41409345
GI number: 41409345
Start: 3602949
End: 3603821
Strand: Reverse
Name: 41409345
Synonym: MAP3247c
Alternate gene names: NA
Gene position: 3603821-3602949 (Counterclockwise)
Preceding gene: 41409354
Following gene: 41409335
Centisome position: 74.62
GC content: 73.65
Gene sequence:
>873_bases ATGTCGACCATGCCGCGCACCTCCTTCGTCATCGCCACCCGGGACCGCTCGGCGGAGCTGACCGGCACGCTGACCCGCCT GCTGGACACCACCGAGTGCCCGATCATCGTGGTGGACAACGCATCCCGCGACGACTCGGTCGCCGCCGCCAGCCGCATCG CCGCCGCCGGCCGGGTGACCGTCATACCGCTGAGCCGCAACGCCGGCGCAGCGGCGCGCAACATCGGTGTGGCGCGGTGC GGCACACCGTACGTGGCGTTCTGCGACGACGACTCGTGGTGGGCGCCGGACGCGATCGCGCGGGCCGAGCAGATCTTCGA CACGTTCGGCACCGTCGCGCTGTTGGCCGCGCGCACCGTGTTACTGCCGGCGCGCCGCGACGACGATTTCACCGAGCAGC TCGCCCACAGCCCACTCGGGCACCGCGCGGGCCTGCCCGGGCCGTCCATTCTCGGGTTCCAGGCCTGCTCGGCACTGGTG CGCGCGTGGGCGTTCCGACGCGTCGGCGGGTTCAGCCCGATCCTGCACTTCCGCGGTGAGGAAACCCTGCTGGCCTGCGA TCTGGCCGCCGACGGCTGGGACCTGTGCTTCTGCCCCGAGCTGGTGGCATACCACCGGCCGTCGCAGATCCGCTCGGCGA GCCGGGCGCAGCGTGCCCGGATCCTGCGCAACGCGCTGCTCACCGCGTGCCTGCGCCGCCCCGTCGACCGGTGCGCCCGG GCGGGTGCGGCGCTGGCCTGGGCGGCGCTGCACGACGCGGCCCACGCCAAGGCGTTGCTCGAGGCGACGGCGGCGTTGCC GGCCGCGCTGCGGGAACGCCGGCGGCTGCCCGATGCCGTCGAGCGTTCGCTGCGGATGCTGGAAAGTGGTTGA
Upstream 100 bases:
>100_bases GATCAGCACCCGGGTCAGTGATCGCATCGGGCTCTGGTACCCGTCAGGTCTGGGGTGAAACCCCGTTTCACCGTTGCCCT TCGGGGTAGTCGCCCCGGTC
Downstream 100 bases:
>100_bases GCCACAAGATCACCCGGATCGCGTGCTCGGGGTGCCGACCCCGCGCCGGGCGGGGGACAGCCGTTCGTAGATGCGTTCGG TGTCGGCCGCCACCCGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase; Transferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyltransferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSTMPRTSFVIATRDRSAELTGTLTRLLDTTECPIIVVDNASRDDSVAAASRIAAAGRVTVIPLSRNAGAAARNIGVARC GTPYVAFCDDDSWWAPDAIARAEQIFDTFGTVALLAARTVLLPARRDDDFTEQLAHSPLGHRAGLPGPSILGFQACSALV RAWAFRRVGGFSPILHFRGEETLLACDLAADGWDLCFCPELVAYHRPSQIRSASRAQRARILRNALLTACLRRPVDRCAR AGAALAWAALHDAAHAKALLEATAALPAALRERRRLPDAVERSLRMLESG
Sequences:
>Translated_290_residues MSTMPRTSFVIATRDRSAELTGTLTRLLDTTECPIIVVDNASRDDSVAAASRIAAAGRVTVIPLSRNAGAAARNIGVARC GTPYVAFCDDDSWWAPDAIARAEQIFDTFGTVALLAARTVLLPARRDDDFTEQLAHSPLGHRAGLPGPSILGFQACSALV RAWAFRRVGGFSPILHFRGEETLLACDLAADGWDLCFCPELVAYHRPSQIRSASRAQRARILRNALLTACLRRPVDRCAR AGAALAWAALHDAAHAKALLEATAALPAALRERRRLPDAVERSLRMLESG >Mature_289_residues STMPRTSFVIATRDRSAELTGTLTRLLDTTECPIIVVDNASRDDSVAAASRIAAAGRVTVIPLSRNAGAAARNIGVARCG TPYVAFCDDDSWWAPDAIARAEQIFDTFGTVALLAARTVLLPARRDDDFTEQLAHSPLGHRAGLPGPSILGFQACSALVR AWAFRRVGGFSPILHFRGEETLLACDLAADGWDLCFCPELVAYHRPSQIRSASRAQRARILRNALLTACLRRPVDRCARA GAALAWAALHDAAHAKALLEATAALPAALRERRRLPDAVERSLRMLESG
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31248; Mature: 31117
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTMPRTSFVIATRDRSAELTGTLTRLLDTTECPIIVVDNASRDDSVAAASRIAAAGRVT CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEE VIPLSRNAGAAARNIGVARCGTPYVAFCDDDSWWAPDAIARAEQIFDTFGTVALLAARTV EEEECCCCCCHHHCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLPARRDDDFTEQLAHSPLGHRAGLPGPSILGFQACSALVRAWAFRRVGGFSPILHFRGE HCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECCC ETLLACDLAADGWDLCFCPELVAYHRPSQIRSASRAQRARILRNALLTACLRRPVDRCAR CEEEEEEECCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAALAWAALHDAAHAKALLEATAALPAALRERRRLPDAVERSLRMLESG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure STMPRTSFVIATRDRSAELTGTLTRLLDTTECPIIVVDNASRDDSVAAASRIAAAGRVT CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEE VIPLSRNAGAAARNIGVARCGTPYVAFCDDDSWWAPDAIARAEQIFDTFGTVALLAARTV EEEECCCCCCHHHCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLPARRDDDFTEQLAHSPLGHRAGLPGPSILGFQACSALVRAWAFRRVGGFSPILHFRGE HCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECCC ETLLACDLAADGWDLCFCPELVAYHRPSQIRSASRAQRARILRNALLTACLRRPVDRCAR CEEEEEEECCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAALAWAALHDAAHAKALLEATAALPAALRERRRLPDAVERSLRMLESG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA