| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41409332
Identifier: 41409332
GI number: 41409332
Start: 3589064
End: 3589822
Strand: Reverse
Name: 41409332
Synonym: MAP3234c
Alternate gene names: NA
Gene position: 3589822-3589064 (Counterclockwise)
Preceding gene: 41409333
Following gene: 41409331
Centisome position: 74.33
GC content: 71.81
Gene sequence:
>759_bases GTGAACGAGCAGCGGTCCGCGGTGCAGATCGCGTCCGAACAGGACCGGGACGTGCCGGTCCTGACGGTCGACGGCGTGCT CGACAGTTCGACCTACCGCACCGTGCGCGACACCGTCATCAAGGCCGCGATCGATGAACCCCGCGCCGTCGTCGTCGACG TCGACCGGGTGCGCGCCCCGTCCGCCTCCGCCTGGACGGTGTTCACCAGCGCGCGCTGGCACGTCAGCATCTGGCCCGAC GTCCCAATCCTGCTGGTGTGCGCGCACCCGCAGACGCGGCGCGAGATCACCACCGCCGGCGTGACCCGCTACGTGCCGGT GCATCCCACCCGCGAGCTGGCCGTGCGGGCCGTGCACGGCCGGACCCTGCAGGTGCGGCGGCGGGCCCGCACCGAACTGC CGCGCTCCGACACCAGCCTGCACCTGGCCCGCGCCGTGCTCACCGATTGGCTCACCCAGTGGGACATCCGGGAGGTCATC CCCGTCGCGGCGACGGTGGCGACCGTGTTCGTCGAAAACGTCCTCGACCACACCGAGAGCGCGCCGGTGCTGATCGTCGA GAGCCATCGCGACACCGTCACGGTCGCGGTCGAGGACAACAGCTTTGCGCTGCCCGGCCGGCACGAGGACGCCGACCGCG GCGCCGACATCGTCTCCGGGCTGGCCATCGTGTCGGCGCTGTGCCGGGTGTGGGGAGCCACCCCCACGTCGTCCGGCAAG ACCGTGTGGGGATCGGTCGGCAGGGAAGACCGGATCTGA
Upstream 100 bases:
>100_bases TGCTCTCGCGGCGCTACACCCAGATCGCCGAGGAAAGCGAACGCGCGCTGCACGTGCTCAGCCACCGGCTGGCCGGCGCC GCCGCCGAGGGTGAAACCCG
Downstream 100 bases:
>100_bases GTCCCGCGAGTAGTGTTCAAGTCCTTCGGCACCCTTATCAGACGGGACTTGGATGAATTCCACGACTGACGAGGCCGACG AGGCATTCGAGGCCTTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNEQRSAVQIASEQDRDVPVLTVDGVLDSSTYRTVRDTVIKAAIDEPRAVVVDVDRVRAPSASAWTVFTSARWHVSIWPD VPILLVCAHPQTRREITTAGVTRYVPVHPTRELAVRAVHGRTLQVRRRARTELPRSDTSLHLARAVLTDWLTQWDIREVI PVAATVATVFVENVLDHTESAPVLIVESHRDTVTVAVEDNSFALPGRHEDADRGADIVSGLAIVSALCRVWGATPTSSGK TVWGSVGREDRI
Sequences:
>Translated_252_residues MNEQRSAVQIASEQDRDVPVLTVDGVLDSSTYRTVRDTVIKAAIDEPRAVVVDVDRVRAPSASAWTVFTSARWHVSIWPD VPILLVCAHPQTRREITTAGVTRYVPVHPTRELAVRAVHGRTLQVRRRARTELPRSDTSLHLARAVLTDWLTQWDIREVI PVAATVATVFVENVLDHTESAPVLIVESHRDTVTVAVEDNSFALPGRHEDADRGADIVSGLAIVSALCRVWGATPTSSGK TVWGSVGREDRI >Mature_252_residues MNEQRSAVQIASEQDRDVPVLTVDGVLDSSTYRTVRDTVIKAAIDEPRAVVVDVDRVRAPSASAWTVFTSARWHVSIWPD VPILLVCAHPQTRREITTAGVTRYVPVHPTRELAVRAVHGRTLQVRRRARTELPRSDTSLHLARAVLTDWLTQWDIREVI PVAATVATVFVENVLDHTESAPVLIVESHRDTVTVAVEDNSFALPGRHEDADRGADIVSGLAIVSALCRVWGATPTSSGK TVWGSVGREDRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27755; Mature: 27755
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQRSAVQIASEQDRDVPVLTVDGVLDSSTYRTVRDTVIKAAIDEPRAVVVDVDRVRAP CCCCCCHHEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCC SASAWTVFTSARWHVSIWPDVPILLVCAHPQTRREITTAGVTRYVPVHPTRELAVRAVHG CCCEEEEEECCEEEEEECCCCCEEEEECCCCHHHHHHHCCCEEEECCCCCHHHHEEHHCC RTLQVRRRARTELPRSDTSLHLARAVLTDWLTQWDIREVIPVAATVATVFVENVLDHTES CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC APVLIVESHRDTVTVAVEDNSFALPGRHEDADRGADIVSGLAIVSALCRVWGATPTSSGK CCEEEEECCCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TVWGSVGREDRI EEECCCCCCCCC >Mature Secondary Structure MNEQRSAVQIASEQDRDVPVLTVDGVLDSSTYRTVRDTVIKAAIDEPRAVVVDVDRVRAP CCCCCCHHEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHCCCC SASAWTVFTSARWHVSIWPDVPILLVCAHPQTRREITTAGVTRYVPVHPTRELAVRAVHG CCCEEEEEECCEEEEEECCCCCEEEEECCCCHHHHHHHCCCEEEECCCCCHHHHEEHHCC RTLQVRRRARTELPRSDTSLHLARAVLTDWLTQWDIREVIPVAATVATVFVENVLDHTES CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC APVLIVESHRDTVTVAVEDNSFALPGRHEDADRGADIVSGLAIVSALCRVWGATPTSSGK CCEEEEECCCCEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TVWGSVGREDRI EEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA