| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is cheB4 [H]
Identifier: 41409333
GI number: 41409333
Start: 3589819
End: 3590838
Strand: Reverse
Name: cheB4 [H]
Synonym: MAP3235c
Alternate gene names: 41409333
Gene position: 3590838-3589819 (Counterclockwise)
Preceding gene: 41409335
Following gene: 41409332
Centisome position: 74.35
GC content: 72.16
Gene sequence:
>1020_bases GTGGTGATTGCGGCGGCAGACGGCGACCTTCAGAGCGACCTTCGTGGCGCGGTAGCGATCGGTGCGTCGGCCGGCGGCGT CGAGGCGCTGTCGAACCTCGCCGCCGGGTTGTCGCCGGACGTGCCGTTCGCGTATCTGATGGTGCTGCACGTGCCCGCGG GAGCGCCCAGCATCCTGGCCCGCATCATCGACCGCAGCGGTCCGCTGCCCGCCTCCGCCGCGCAGGACGGCGCGCCGCTG CAACCCGGGCACATCTACGTCGGCGTCCCGGACCGGCATCTGCTGGTCGACGGCGCGCACGTGCTGCTGTCGCAGGGGCC GACCGAGAACGGCCACCGGCCCGCCATCAACGCGTTGTTCCGGTCGGTGGCGCTGACGTTCGGGCCGCGCGCGATCGGCG TGCTGCTCTCCGGTGTGCTCGACGACGGCGTGCTGGGGATGGCGGCCATCCGCTCCCGCGGCGGGGTCACCGTCTGCCAA TCACCCGACGACGCACTGTTCCCGGCGATGCCGGCCAACGCCCTGGACGCCGGTGTGGTGGACCGGCAGGCCGCCGCGGC CGACATCGGCGTGGTGCTCAAGGAGCTGGCGCACCGAGAGATAGAGGATCCCGACATGCAACGCGACCCCGGGATGGAGC TGGAGAATCGCATCGCCATGATGTCGCGGTTCGCCACCGACTTCGACACCGAAAAGCTGGGCCCGCCGTCCGGCTACACC TGTCCCGACTGCAACGGCTCGCTGGTCTCGCTCAGCGAGGGCAACTACCGCTGCCGGGTCGGTCATGCCTGGACGGCCGA GGCCCTGCTGAGCGCGCGGGACAACGAGCTCGAGGGCGCCCTGTGGGTGGCGGTGCGCAGCCTGCAGGAGAAGGCCCGGC TGGCCCGTGACATGGCCGGCAAGGCCGGGGCGGGCCTGCTCTCGCGGCGCTACACCCAGATCGCCGAGGAAAGCGAACGC GCGCTGCACGTGCTCAGCCACCGGCTGGCCGGCGCCGCCGCCGAGGGTGAAACCCGGTGA
Upstream 100 bases:
>100_bases GACCGTGGGGGAGTACCACCGGCTCACCCGCGCAAACGGCGCGGCTGTGCCCCTATCCATCGGTGGGTGGGTTGCCTACG ATCGATAGGGGTAGTCGAAA
Downstream 100 bases:
>100_bases ACGAGCAGCGGTCCGCGGTGCAGATCGCGTCCGAACAGGACCGGGACGTGCCGGTCCTGACGGTCGACGGCGTGCTCGAC AGTTCGACCTACCGCACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MVIAAADGDLQSDLRGAVAIGASAGGVEALSNLAAGLSPDVPFAYLMVLHVPAGAPSILARIIDRSGPLPASAAQDGAPL QPGHIYVGVPDRHLLVDGAHVLLSQGPTENGHRPAINALFRSVALTFGPRAIGVLLSGVLDDGVLGMAAIRSRGGVTVCQ SPDDALFPAMPANALDAGVVDRQAAAADIGVVLKELAHREIEDPDMQRDPGMELENRIAMMSRFATDFDTEKLGPPSGYT CPDCNGSLVSLSEGNYRCRVGHAWTAEALLSARDNELEGALWVAVRSLQEKARLARDMAGKAGAGLLSRRYTQIAEESER ALHVLSHRLAGAAAEGETR
Sequences:
>Translated_339_residues MVIAAADGDLQSDLRGAVAIGASAGGVEALSNLAAGLSPDVPFAYLMVLHVPAGAPSILARIIDRSGPLPASAAQDGAPL QPGHIYVGVPDRHLLVDGAHVLLSQGPTENGHRPAINALFRSVALTFGPRAIGVLLSGVLDDGVLGMAAIRSRGGVTVCQ SPDDALFPAMPANALDAGVVDRQAAAADIGVVLKELAHREIEDPDMQRDPGMELENRIAMMSRFATDFDTEKLGPPSGYT CPDCNGSLVSLSEGNYRCRVGHAWTAEALLSARDNELEGALWVAVRSLQEKARLARDMAGKAGAGLLSRRYTQIAEESER ALHVLSHRLAGAAAEGETR >Mature_339_residues MVIAAADGDLQSDLRGAVAIGASAGGVEALSNLAAGLSPDVPFAYLMVLHVPAGAPSILARIIDRSGPLPASAAQDGAPL QPGHIYVGVPDRHLLVDGAHVLLSQGPTENGHRPAINALFRSVALTFGPRAIGVLLSGVLDDGVLGMAAIRSRGGVTVCQ SPDDALFPAMPANALDAGVVDRQAAAADIGVVLKELAHREIEDPDMQRDPGMELENRIAMMSRFATDFDTEKLGPPSGYT CPDCNGSLVSLSEGNYRCRVGHAWTAEALLSARDNELEGALWVAVRSLQEKARLARDMAGKAGAGLLSRRYTQIAEESER ALHVLSHRLAGAAAEGETR
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=165, Percent_Identity=34.5454545454545, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 35338; Mature: 35338
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50122 CHEB ; PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIAAADGDLQSDLRGAVAIGASAGGVEALSNLAAGLSPDVPFAYLMVLHVPAGAPSILA CEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHH RIIDRSGPLPASAAQDGAPLQPGHIYVGVPDRHLLVDGAHVLLSQGPTENGHRPAINALF HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCHHHEEECCCCCCCCCHHHHHHH RSVALTFGPRAIGVLLSGVLDDGVLGMAAIRSRGGVTVCQSPDDALFPAMPANALDAGVV HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHCHH DRQAAAADIGVVLKELAHREIEDPDMQRDPGMELENRIAMMSRFATDFDTEKLGPPSGYT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCC CPDCNGSLVSLSEGNYRCRVGHAWTAEALLSARDNELEGALWVAVRSLQEKARLARDMAG CCCCCCCEEEECCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC KAGAGLLSRRYTQIAEESERALHVLSHRLAGAAAEGETR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MVIAAADGDLQSDLRGAVAIGASAGGVEALSNLAAGLSPDVPFAYLMVLHVPAGAPSILA CEEEECCCCHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHH RIIDRSGPLPASAAQDGAPLQPGHIYVGVPDRHLLVDGAHVLLSQGPTENGHRPAINALF HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCHHHEEECCCCCCCCCHHHHHHH RSVALTFGPRAIGVLLSGVLDDGVLGMAAIRSRGGVTVCQSPDDALFPAMPANALDAGVV HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHCHH DRQAAAADIGVVLKELAHREIEDPDMQRDPGMELENRIAMMSRFATDFDTEKLGPPSGYT HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCC CPDCNGSLVSLSEGNYRCRVGHAWTAEALLSARDNELEGALWVAVRSLQEKARLARDMAG CCCCCCCEEEECCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC KAGAGLLSRRYTQIAEESERALHVLSHRLAGAAAEGETR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA