| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409329
Identifier: 41409329
GI number: 41409329
Start: 3584883
End: 3586061
Strand: Reverse
Name: 41409329
Synonym: MAP3231c
Alternate gene names: NA
Gene position: 3586061-3584883 (Counterclockwise)
Preceding gene: 41409331
Following gene: 41409328
Centisome position: 74.25
GC content: 73.96
Gene sequence:
>1179_bases TTGCAGTTGAGAATTGCAATTGTCAGCGGCGATGACGTCGTCGGGGAGGACCCCGAACAGTTGGGTGCCGCGCTGGCGGC CCAGGGCCATGACGTCACCACCTGCCTGCGGCGGGCCGGGCGGCGACGCGGGGGCAGCGCCCCGGACGGCTACCGGCGGG TGTCGGTGCCGGTGGGCCCGCACGACGCCGCCGCGCCGGTCGACGTGCTGCCCTACGTCGGGGACTGGGCGGGCGCCCTC GAGCGGATCTGGTCCAAGGACCGGCCCGACGTGGTGCACGCCTACGGCTGGCTGGGCGGGCTGGCCGCCCAATTGGCCGC CCGCCGGCGCCACATTCCGACCGTGCAGTCGTTTTTGGGCCTGGCCGCGACGGCGCGCGGTCACGACGGCGAACGCGGCA CCGAACGCCAACGCATCGAGCCGCTGCTGGCCCGCAGCGCGAACTGGGTGACCGGGGAGAGCAGCGCCGACGTCGACGCG CTGGCCCGGCTGCGCCGGCGCCGGGTGCGGGTGTCCGCCCTGACCTGCGGGGTGGACGCCGAGCGCTACACCCCGACCGG CCCGGCGGACTCCCGTGGGGCCCTGCAGCGCATCCTGTACGTGGCGCCAAACCCGTTGTGGCACAACGGTATCGATCTCG CCATCCGGGCCCTGCCCAAGGTTCGCGGTGCGGAGCTGGTGATCGCCGAGACCGACCCCGGCGGCGACGGGCACGACGGC GCGCGAGCCCAGTTGCTGCGCCTTTCGGTGCACCTCGGGGTGGCGGACCGGGTCCGCTTCGCCGGGCCGGTCGGCGGCGA CGAGCTGCCCCGGTTGCTCCGTTCGGCCGACGTGCTGGTGTGCACGCCGCGCCGGCCGCCGCGCCCCACCCCGGTGCTGC AGGCGATGGCCAGCGGGGTGGTGGTGGTCGTGGCCACCATGGGGGTGCTGTCCGACGTGGTGCTCGACGACATCACCGGC ATCGTGGTGTCGCCGGAGAATCCCGCGCGATTGGCCGCCGCGCTGAGAAGGCTGCTGGCGCAGAAGTTTCAATGCGAAAG CATGGGCGCGGCCGGACGCAGCCGCGCGCAGTCGCGCTTCGCCTGGCAGCGGATCGCGCTGGACGCGCTGAACATCTACC AAAGCCTCGGGGTGCACGAGCCGGCCGCGCCCCTCGACGGCGACGCGGTGCTGCGATGA
Upstream 100 bases:
>100_bases CACGGGCCGCGCGCCGAAGAGGTGATCCGGGCCGTTTGTCCATCCCAGGCCGGGGTATGCCACCCGATGTTGGCGGACGG ACGATGGCGCGCGGAGGGAA
Downstream 100 bases:
>100_bases CGCGCCCGCCCACGGTCTTCCCCCCGGGCCGGTCATGGGCCTGACCACCATGACGGTCCGCGACGACGGCGCGCCGGTCG GTGCGCCGGCCGAGGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MQLRIAIVSGDDVVGEDPEQLGAALAAQGHDVTTCLRRAGRRRGGSAPDGYRRVSVPVGPHDAAAPVDVLPYVGDWAGAL ERIWSKDRPDVVHAYGWLGGLAAQLAARRRHIPTVQSFLGLAATARGHDGERGTERQRIEPLLARSANWVTGESSADVDA LARLRRRRVRVSALTCGVDAERYTPTGPADSRGALQRILYVAPNPLWHNGIDLAIRALPKVRGAELVIAETDPGGDGHDG ARAQLLRLSVHLGVADRVRFAGPVGGDELPRLLRSADVLVCTPRRPPRPTPVLQAMASGVVVVVATMGVLSDVVLDDITG IVVSPENPARLAAALRRLLAQKFQCESMGAAGRSRAQSRFAWQRIALDALNIYQSLGVHEPAAPLDGDAVLR
Sequences:
>Translated_392_residues MQLRIAIVSGDDVVGEDPEQLGAALAAQGHDVTTCLRRAGRRRGGSAPDGYRRVSVPVGPHDAAAPVDVLPYVGDWAGAL ERIWSKDRPDVVHAYGWLGGLAAQLAARRRHIPTVQSFLGLAATARGHDGERGTERQRIEPLLARSANWVTGESSADVDA LARLRRRRVRVSALTCGVDAERYTPTGPADSRGALQRILYVAPNPLWHNGIDLAIRALPKVRGAELVIAETDPGGDGHDG ARAQLLRLSVHLGVADRVRFAGPVGGDELPRLLRSADVLVCTPRRPPRPTPVLQAMASGVVVVVATMGVLSDVVLDDITG IVVSPENPARLAAALRRLLAQKFQCESMGAAGRSRAQSRFAWQRIALDALNIYQSLGVHEPAAPLDGDAVLR >Mature_392_residues MQLRIAIVSGDDVVGEDPEQLGAALAAQGHDVTTCLRRAGRRRGGSAPDGYRRVSVPVGPHDAAAPVDVLPYVGDWAGAL ERIWSKDRPDVVHAYGWLGGLAAQLAARRRHIPTVQSFLGLAATARGHDGERGTERQRIEPLLARSANWVTGESSADVDA LARLRRRRVRVSALTCGVDAERYTPTGPADSRGALQRILYVAPNPLWHNGIDLAIRALPKVRGAELVIAETDPGGDGHDG ARAQLLRLSVHLGVADRVRFAGPVGGDELPRLLRSADVLVCTPRRPPRPTPVLQAMASGVVVVVATMGVLSDVVLDDITG IVVSPENPARLAAALRRLLAQKFQCESMGAAGRSRAQSRFAWQRIALDALNIYQSLGVHEPAAPLDGDAVLR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 41828; Mature: 41828
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRIAIVSGDDVVGEDPEQLGAALAAQGHDVTTCLRRAGRRRGGSAPDGYRRVSVPVGP CEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCC HDAAAPVDVLPYVGDWAGALERIWSKDRPDVVHAYGWLGGLAAQLAARRRHIPTVQSFLG CCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LAATARGHDGERGTERQRIEPLLARSANWVTGESSADVDALARLRRRRVRVSALTCGVDA HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCC ERYTPTGPADSRGALQRILYVAPNPLWHNGIDLAIRALPKVRGAELVIAETDPGGDGHDG CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCH ARAQLLRLSVHLGVADRVRFAGPVGGDELPRLLRSADVLVCTPRRPPRPTPVLQAMASGV HHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCH VVVVATMGVLSDVVLDDITGIVVSPENPARLAAALRRLLAQKFQCESMGAAGRSRAQSRF HHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AWQRIALDALNIYQSLGVHEPAAPLDGDAVLR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQLRIAIVSGDDVVGEDPEQLGAALAAQGHDVTTCLRRAGRRRGGSAPDGYRRVSVPVGP CEEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCC HDAAAPVDVLPYVGDWAGALERIWSKDRPDVVHAYGWLGGLAAQLAARRRHIPTVQSFLG CCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LAATARGHDGERGTERQRIEPLLARSANWVTGESSADVDALARLRRRRVRVSALTCGVDA HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCC ERYTPTGPADSRGALQRILYVAPNPLWHNGIDLAIRALPKVRGAELVIAETDPGGDGHDG CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCH ARAQLLRLSVHLGVADRVRFAGPVGGDELPRLLRSADVLVCTPRRPPRPTPVLQAMASGV HHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCH VVVVATMGVLSDVVLDDITGIVVSPENPARLAAALRRLLAQKFQCESMGAAGRSRAQSRF HHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AWQRIALDALNIYQSLGVHEPAAPLDGDAVLR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]