| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is hpx
Identifier: 41409327
GI number: 41409327
Start: 3582702
End: 3583652
Strand: Reverse
Name: hpx
Synonym: MAP3229c
Alternate gene names: 41409327
Gene position: 3583652-3582702 (Counterclockwise)
Preceding gene: 41409328
Following gene: 41409325
Centisome position: 74.2
GC content: 73.29
Gene sequence:
>951_bases ATGAGGGCTCGAACGGACCCGTTCCCCGACCGGTTGCCGCCGAGTCGCACCGTCACGGTCCGGGCGGTCGACGGCACCCG GCTGCACGCGCAGGTGTTCGGTCCGCCGGACGGGTATCCGATCGTGCTGACCCACGGCATCACCTGCGCCATCCGCGCCT GGGCATACCAGATCGACGACCTGGCCGGCGACTACCGGGTGATCGCCTACGACCATCGCGGCCACGGCCGCAGCGGCGTG CCGAAGGCCACCGGCTACAGCCTCAAACACCTTGCCGCCGACCTGGATTCGGTGCTGGAGGCGACGCTGGCGCCGCACGA GCGGGCGGTGTTGGCCGGGCACTCGATGGGCGGCATCACCATCGCCGCATGGTCAAACCGCTACCGGCACAAGGTTTCCC GGCGCGCGGACGCCGTCGCCCTGATCAACACCACCAGCGGTGAGCTGATCCGGCAGGTGCAGCTGCTCTCGGTGCCGCCG GGCCTGTCGCCGGCCCGGGTGCTGGCCGGGCGCGCGCTGATCGGCGCGTTCGCCGGGTTCGCGGTCCCGCGGGCGGCCCG CGTCCCGAGCCGCCATCTGGTCGCGCTGCCGGCCACCGGGCGCGACGCCGACCCGGCCATCGCCCGGCTGGTCTACGAGC TGTTCGAGAACACCGCGCCGGCGGGGCGGGCCGGCTGCGCGCGGGCGCTGGTCTCCGCGTTGGGGTCGCGCTACCTGGAC CTGGCCGGGCTGACGGTGCCGACGCTGGTCATCGGCAGCGAACGGGACCGGCTGACACCCATCCGCCAGTCCCGCAGGAT CGCCGAGGGCCTGCCGAACCTGATCGAGCTGGTGGAGCTGCCCGGCGGGCACTGCTCGATGCTGGAACACCCGCGGGAGG TGAACCGGCGGCTGCGGGCGCTCGCCGAATCGGCGACCCGCAACCTGCCCACCCACCGGATCAGCTCATAG
Upstream 100 bases:
>100_bases AATCGTTTGCCCGATTTACCAAAAGCGAACCGAACTTGGCGATAAGATCGTCTGATCCTTTAGCTGCGGCGACGGGGCCG CGTTCGAGGGGGGAGCGGCG
Downstream 100 bases:
>100_bases CAGGGCGATAACCTCGGCGGCGGCGCGCCGGCCGGAGCGGATGGCGCCGTCGAGGAATCCGGTCCACTCGTCGGCGGTTT CGGTGCCGGCCCAGTGGATC
Product: Hpx
Products: NA
Alternate protein names: Aminohydrolase [H]
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MRARTDPFPDRLPPSRTVTVRAVDGTRLHAQVFGPPDGYPIVLTHGITCAIRAWAYQIDDLAGDYRVIAYDHRGHGRSGV PKATGYSLKHLAADLDSVLEATLAPHERAVLAGHSMGGITIAAWSNRYRHKVSRRADAVALINTTSGELIRQVQLLSVPP GLSPARVLAGRALIGAFAGFAVPRAARVPSRHLVALPATGRDADPAIARLVYELFENTAPAGRAGCARALVSALGSRYLD LAGLTVPTLVIGSERDRLTPIRQSRRIAEGLPNLIELVELPGGHCSMLEHPREVNRRLRALAESATRNLPTHRISS
Sequences:
>Translated_316_residues MRARTDPFPDRLPPSRTVTVRAVDGTRLHAQVFGPPDGYPIVLTHGITCAIRAWAYQIDDLAGDYRVIAYDHRGHGRSGV PKATGYSLKHLAADLDSVLEATLAPHERAVLAGHSMGGITIAAWSNRYRHKVSRRADAVALINTTSGELIRQVQLLSVPP GLSPARVLAGRALIGAFAGFAVPRAARVPSRHLVALPATGRDADPAIARLVYELFENTAPAGRAGCARALVSALGSRYLD LAGLTVPTLVIGSERDRLTPIRQSRRIAEGLPNLIELVELPGGHCSMLEHPREVNRRLRALAESATRNLPTHRISS >Mature_316_residues MRARTDPFPDRLPPSRTVTVRAVDGTRLHAQVFGPPDGYPIVLTHGITCAIRAWAYQIDDLAGDYRVIAYDHRGHGRSGV PKATGYSLKHLAADLDSVLEATLAPHERAVLAGHSMGGITIAAWSNRYRHKVSRRADAVALINTTSGELIRQVQLLSVPP GLSPARVLAGRALIGAFAGFAVPRAARVPSRHLVALPATGRDADPAIARLVYELFENTAPAGRAGCARALVSALGSRYLD LAGLTVPTLVIGSERDRLTPIRQSRRIAEGLPNLIELVELPGGHCSMLEHPREVNRRLRALAESATRNLPTHRISS
Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR019913 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.1.-.- [C]
Molecular weight: Translated: 34029; Mature: 34029
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARTDPFPDRLPPSRTVTVRAVDGTRLHAQVFGPPDGYPIVLTHGITCAIRAWAYQIDD CCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHH LAGDYRVIAYDHRGHGRSGVPKATGYSLKHLAADLDSVLEATLAPHERAVLAGHSMGGIT CCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEE IAAWSNRYRHKVSRRADAVALINTTSGELIRQVQLLSVPPGLSPARVLAGRALIGAFAGF EEECCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH AVPRAARVPSRHLVALPATGRDADPAIARLVYELFENTAPAGRAGCARALVSALGSRYLD HCCHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LAGLTVPTLVIGSERDRLTPIRQSRRIAEGLPNLIELVELPGGHCSMLEHPREVNRRLRA HCCCCHHEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCHHHHHHHHHH LAESATRNLPTHRISS HHHHHHHCCCCCCCCC >Mature Secondary Structure MRARTDPFPDRLPPSRTVTVRAVDGTRLHAQVFGPPDGYPIVLTHGITCAIRAWAYQIDD CCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHH LAGDYRVIAYDHRGHGRSGVPKATGYSLKHLAADLDSVLEATLAPHERAVLAGHSMGGIT CCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEE IAAWSNRYRHKVSRRADAVALINTTSGELIRQVQLLSVPPGLSPARVLAGRALIGAFAGF EEECCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH AVPRAARVPSRHLVALPATGRDADPAIARLVYELFENTAPAGRAGCARALVSALGSRYLD HCCHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LAGLTVPTLVIGSERDRLTPIRQSRRIAEGLPNLIELVELPGGHCSMLEHPREVNRRLRA HCCCCHHEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCHHHHHHHHHH LAESATRNLPTHRISS HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA