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The map label for this gene is soxA [H]

Identifier: 41409324

GI number: 41409324

Start: 3578538

End: 3579911

Strand: Reverse

Name: soxA [H]

Synonym: MAP3226c

Alternate gene names: 41409324

Gene position: 3579911-3578538 (Counterclockwise)

Preceding gene: 41409325

Following gene: 41409321

Centisome position: 74.12

GC content: 71.76

Gene sequence:

>1374_bases
ATGAGCGCGGCCCGCCGGATCTACCTCAACGCCTTCGACATGGCCTGCGTCGGGCATCAGTCGGCCGGGCTGTGGCGGCA
CCCCGACGACCAGGGCCACCGGTACCGCGAGCTGAGCTACTGGACCGAGCTGGCCCGCACGCTGGAGGCGGGCGGGTTCG
ACGCGCTGTTTTTGGCCGACGTGCTCGGCGTCTACGACATCTACGGCGCCTCCCGCGACGCCGCCGTCGTCGACGCCGCG
CAGTTCCCGGTCAACGAACCGAGCGCCGCGGTCTCGGCGATGGCGGCGGTGACCGAGACGCTGGGATTCGGCATCACCCT
GTCGCTGACCTACGAGCAGCCGTATGCCCTGGCGCGCCGGCTCTCCACGCTGGACCACCTCACCGGCGGCCGGGTGGCGT
GGAACATCGTCACATCCTATTTGGACAGTGCCGCACGCAATTTGGGCCTAGACGCCCAGATCCCGCACGACCAGCGCTAC
GAGATCGCCGACGAATATCTGGAGGTCTGCTACAAGCTGTGGGAGGGCTCGTGGGAGGCCGGCGCCGTGCTGCGCGACCG
GCAGCGCGGCGTGTTCACCGACCCCGCCAAGGTGCACGACATCGAGCACAAGGGCCGCTACTTCTCGGTGCCCGGGCCGT
TCCTGTGCGAGCCGTCGCCGCAACGCACCCCGGTGCTGTTCCAGGCCGGGGCCTCACCGCGCGGTATCCGCTTCGCCGCG
GCCCACGCCGAGGCGGTCTTCGTCTCCGGGCCGACGGCGCAGGTGGTGCGCGAGTCCGTGCGGGCGCTGCGGACGGCCGC
CGCGCAGCTGGGCCGGGACCCGCGGGCGGTCAAGGTGTTCACCATGGTGACCCCGGTGGTCGCCGAGACGCACGACGCGG
CCGTCGCCAAACTGGCCGAATACCGGCGCTTCGTCAGCCCCCGCGGGGCGCTGGCCCTGTTCGGCGGCTGGACCGGGGTG
GATCTGGCCGAACTGGACCCCGACGAACCGCTGACCTACGTCGAAACCGACGCCAACCGCTCGGCGCTGGCATCGTTCAC
CACCGCGGGGCAGGCCTGGACGGTGGCCGAGCTGGCCGCCGAGATCGGCATCGGCGGGCGCGGCCCGGTGCTGGTGGGGT
CGCCGACCGAGGTCGCCGACGAACTCGAGCGTTGGGTCGACGACGCCGACGTCGACGGGTTCAACGTGGCCTACGTGACC
ACCCCGGGCACCTTCGTCGATTTCGCGAAATTCGTTGTGCCCGAGCTACGTCGGCGCGGGCGGGTGCCCGAGGAGGTGCC
GGGTTCGACGCTGCGCGAACGCCTGGGGGCCGCGGGGCCGCTGCTGGGCGACGACCACCCCGGGGCGGCGTACCGGTTAC
GGCGCGACCGTTAA

Upstream 100 bases:

>100_bases
GCGGCCGGCCGTGGTTGATCGTCGGCTATTTCGCGGTGCTGGCGGCGATCACCGTGGGCGCCGCCTGCGCGGCCCGGGAG
ACGCGCGGGGAGCCGATCGG

Downstream 100 bases:

>100_bases
CCAGTCGGAGAATCCGGACGGGTCGTGGCGCCCCAGCGCGCCGTGCTCGTAGAGGCCCCAGCCCTCCACCGGGGCCTTGT
CGCCGTCGCGGCAGATCGCC

Product: hypothetical protein

Products: an aldehyde; SO3; H2O; FMN [C]

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MSAARRIYLNAFDMACVGHQSAGLWRHPDDQGHRYRELSYWTELARTLEAGGFDALFLADVLGVYDIYGASRDAAVVDAA
QFPVNEPSAAVSAMAAVTETLGFGITLSLTYEQPYALARRLSTLDHLTGGRVAWNIVTSYLDSAARNLGLDAQIPHDQRY
EIADEYLEVCYKLWEGSWEAGAVLRDRQRGVFTDPAKVHDIEHKGRYFSVPGPFLCEPSPQRTPVLFQAGASPRGIRFAA
AHAEAVFVSGPTAQVVRESVRALRTAAAQLGRDPRAVKVFTMVTPVVAETHDAAVAKLAEYRRFVSPRGALALFGGWTGV
DLAELDPDEPLTYVETDANRSALASFTTAGQAWTVAELAAEIGIGGRGPVLVGSPTEVADELERWVDDADVDGFNVAYVT
TPGTFVDFAKFVVPELRRRGRVPEEVPGSTLRERLGAAGPLLGDDHPGAAYRLRRDR

Sequences:

>Translated_457_residues
MSAARRIYLNAFDMACVGHQSAGLWRHPDDQGHRYRELSYWTELARTLEAGGFDALFLADVLGVYDIYGASRDAAVVDAA
QFPVNEPSAAVSAMAAVTETLGFGITLSLTYEQPYALARRLSTLDHLTGGRVAWNIVTSYLDSAARNLGLDAQIPHDQRY
EIADEYLEVCYKLWEGSWEAGAVLRDRQRGVFTDPAKVHDIEHKGRYFSVPGPFLCEPSPQRTPVLFQAGASPRGIRFAA
AHAEAVFVSGPTAQVVRESVRALRTAAAQLGRDPRAVKVFTMVTPVVAETHDAAVAKLAEYRRFVSPRGALALFGGWTGV
DLAELDPDEPLTYVETDANRSALASFTTAGQAWTVAELAAEIGIGGRGPVLVGSPTEVADELERWVDDADVDGFNVAYVT
TPGTFVDFAKFVVPELRRRGRVPEEVPGSTLRERLGAAGPLLGDDHPGAAYRLRRDR
>Mature_456_residues
SAARRIYLNAFDMACVGHQSAGLWRHPDDQGHRYRELSYWTELARTLEAGGFDALFLADVLGVYDIYGASRDAAVVDAAQ
FPVNEPSAAVSAMAAVTETLGFGITLSLTYEQPYALARRLSTLDHLTGGRVAWNIVTSYLDSAARNLGLDAQIPHDQRYE
IADEYLEVCYKLWEGSWEAGAVLRDRQRGVFTDPAKVHDIEHKGRYFSVPGPFLCEPSPQRTPVLFQAGASPRGIRFAAA
HAEAVFVSGPTAQVVRESVRALRTAAAQLGRDPRAVKVFTMVTPVVAETHDAAVAKLAEYRRFVSPRGALALFGGWTGVD
LAELDPDEPLTYVETDANRSALASFTTAGQAWTVAELAAEIGIGGRGPVLVGSPTEVADELERWVDDADVDGFNVAYVTT
PGTFVDFAKFVVPELRRRGRVPEEVPGSTLRERLGAAGPLLGDDHPGAAYRLRRDR

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: 1.14.14.5 [C]

Molecular weight: Translated: 49705; Mature: 49574

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAARRIYLNAFDMACVGHQSAGLWRHPDDQGHRYRELSYWTELARTLEAGGFDALFLAD
CCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
VLGVYDIYGASRDAAVVDAAQFPVNEPSAAVSAMAAVTETLGFGITLSLTYEQPYALARR
HHHHHHHCCCCCCCCEEEHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH
LSTLDHLTGGRVAWNIVTSYLDSAARNLGLDAQIPHDQRYEIADEYLEVCYKLWEGSWEA
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
GAVLRDRQRGVFTDPAKVHDIEHKGRYFSVPGPFLCEPSPQRTPVLFQAGASPRGIRFAA
CHHHHHCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEE
AHAEAVFVSGPTAQVVRESVRALRTAAAQLGRDPRAVKVFTMVTPVVAETHDAAVAKLAE
ECCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCHHHHHHHHHH
YRRFVSPRGALALFGGWTGVDLAELDPDEPLTYVETDANRSALASFTTAGQAWTVAELAA
HHHHHCCCCCEEEECCCCCCCHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHH
EIGIGGRGPVLVGSPTEVADELERWVDDADVDGFNVAYVTTPGTFVDFAKFVVPELRRRG
HHCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC
RVPEEVPGSTLRERLGAAGPLLGDDHPGAAYRLRRDR
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure 
SAARRIYLNAFDMACVGHQSAGLWRHPDDQGHRYRELSYWTELARTLEAGGFDALFLAD
CCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
VLGVYDIYGASRDAAVVDAAQFPVNEPSAAVSAMAAVTETLGFGITLSLTYEQPYALARR
HHHHHHHCCCCCCCCEEEHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH
LSTLDHLTGGRVAWNIVTSYLDSAARNLGLDAQIPHDQRYEIADEYLEVCYKLWEGSWEA
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
GAVLRDRQRGVFTDPAKVHDIEHKGRYFSVPGPFLCEPSPQRTPVLFQAGASPRGIRFAA
CHHHHHCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEE
AHAEAVFVSGPTAQVVRESVRALRTAAAQLGRDPRAVKVFTMVTPVVAETHDAAVAKLAE
ECCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCHHHHHHHHHH
YRRFVSPRGALALFGGWTGVDLAELDPDEPLTYVETDANRSALASFTTAGQAWTVAELAA
HHHHHCCCCCEEEECCCCCCCHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHH
EIGIGGRGPVLVGSPTEVADELERWVDDADVDGFNVAYVTTPGTFVDFAKFVVPELRRRG
HHCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC
RVPEEVPGSTLRERLGAAGPLLGDDHPGAAYRLRRDR
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FMN. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: an alkanesulfonate; O2; FMNH2 [C]

Specific reaction: an alkanesulfonate + O2 + FMNH2 = an aldehyde + SO3 + H2O + FMN [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]